Cloning of a crustin-like, single whey-acidic-domain, antibacterial peptide from the haemocytes of the European lobster, Homarus gammarus, and its response to infection with bacteria.
Degenerate PCR was used to isolate a 221-base pair nucleotide sequence of a new crustin-like antibacterial peptide from the haemocytes of the European lobster, Homarus gammarus. Rapid amplification of cDNA ends was used to extend the sequence to determine the complete open reading frame and untransl...
Published in: | Molecular Immunology |
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2005
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ftsouthampton:oai:eprints.soton.ac.uk:24111 2023-07-30T04:03:21+02:00 Cloning of a crustin-like, single whey-acidic-domain, antibacterial peptide from the haemocytes of the European lobster, Homarus gammarus, and its response to infection with bacteria. Hauton, C. Brockton, V. Smith, V.J. 2005-09-06 text https://eprints.soton.ac.uk/24111/ https://eprints.soton.ac.uk/24111/1/Hauton_et_al_Mol_Immunol_2006.pdf en eng https://eprints.soton.ac.uk/24111/1/Hauton_et_al_Mol_Immunol_2006.pdf Hauton, C., Brockton, V. and Smith, V.J. (2005) Cloning of a crustin-like, single whey-acidic-domain, antibacterial peptide from the haemocytes of the European lobster, Homarus gammarus, and its response to infection with bacteria. Molecular Immunology, 43 (9), 1490-1496. (doi:10.1016/j.molimm.2005.07.029 <http://dx.doi.org/10.1016/j.molimm.2005.07.029>). Article PeerReviewed 2005 ftsouthampton https://doi.org/10.1016/j.molimm.2005.07.029 2023-07-09T20:39:01Z Degenerate PCR was used to isolate a 221-base pair nucleotide sequence of a new crustin-like antibacterial peptide from the haemocytes of the European lobster, Homarus gammarus. Rapid amplification of cDNA ends was used to extend the sequence to determine the complete open reading frame and untranslated regions. The inferred amino acid sequence of this peptide was found to be similar to crustin-like peptides isolated for several species of shrimp as well as the shore crab, Carcinus maenas. The sequence also contains a single-whey-acidic protein (WAP) domain, similar to novel antibacterial single-whey-acidic domain (SWD) peptides that have been recently described in the tiger shrimp, Penaeus monodon, and the Pacific white shrimp, Litopenaeus vannamei. Real-time PCR was used to analyse the expression of the gene coding for this peptide. The gene is up regulated after inoculation with the Gram-positive lobster pathogen Aerococcus viridans var. homari but down regulated after inoculation with the Gram-negative bacteria Listonella anguillarum. Phylogenetic analysis of this new peptide shows that it is most related to other antimicrobial crustin peptides and that the crustins are only distantly related to the antibacterial SWD peptides recently described. Article in Journal/Newspaper European lobster Homarus gammarus University of Southampton: e-Prints Soton Pacific Molecular Immunology 43 9 1490 1496 |
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Open Polar |
collection |
University of Southampton: e-Prints Soton |
op_collection_id |
ftsouthampton |
language |
English |
description |
Degenerate PCR was used to isolate a 221-base pair nucleotide sequence of a new crustin-like antibacterial peptide from the haemocytes of the European lobster, Homarus gammarus. Rapid amplification of cDNA ends was used to extend the sequence to determine the complete open reading frame and untranslated regions. The inferred amino acid sequence of this peptide was found to be similar to crustin-like peptides isolated for several species of shrimp as well as the shore crab, Carcinus maenas. The sequence also contains a single-whey-acidic protein (WAP) domain, similar to novel antibacterial single-whey-acidic domain (SWD) peptides that have been recently described in the tiger shrimp, Penaeus monodon, and the Pacific white shrimp, Litopenaeus vannamei. Real-time PCR was used to analyse the expression of the gene coding for this peptide. The gene is up regulated after inoculation with the Gram-positive lobster pathogen Aerococcus viridans var. homari but down regulated after inoculation with the Gram-negative bacteria Listonella anguillarum. Phylogenetic analysis of this new peptide shows that it is most related to other antimicrobial crustin peptides and that the crustins are only distantly related to the antibacterial SWD peptides recently described. |
format |
Article in Journal/Newspaper |
author |
Hauton, C. Brockton, V. Smith, V.J. |
spellingShingle |
Hauton, C. Brockton, V. Smith, V.J. Cloning of a crustin-like, single whey-acidic-domain, antibacterial peptide from the haemocytes of the European lobster, Homarus gammarus, and its response to infection with bacteria. |
author_facet |
Hauton, C. Brockton, V. Smith, V.J. |
author_sort |
Hauton, C. |
title |
Cloning of a crustin-like, single whey-acidic-domain, antibacterial peptide from the haemocytes of the European lobster, Homarus gammarus, and its response to infection with bacteria. |
title_short |
Cloning of a crustin-like, single whey-acidic-domain, antibacterial peptide from the haemocytes of the European lobster, Homarus gammarus, and its response to infection with bacteria. |
title_full |
Cloning of a crustin-like, single whey-acidic-domain, antibacterial peptide from the haemocytes of the European lobster, Homarus gammarus, and its response to infection with bacteria. |
title_fullStr |
Cloning of a crustin-like, single whey-acidic-domain, antibacterial peptide from the haemocytes of the European lobster, Homarus gammarus, and its response to infection with bacteria. |
title_full_unstemmed |
Cloning of a crustin-like, single whey-acidic-domain, antibacterial peptide from the haemocytes of the European lobster, Homarus gammarus, and its response to infection with bacteria. |
title_sort |
cloning of a crustin-like, single whey-acidic-domain, antibacterial peptide from the haemocytes of the european lobster, homarus gammarus, and its response to infection with bacteria. |
publishDate |
2005 |
url |
https://eprints.soton.ac.uk/24111/ https://eprints.soton.ac.uk/24111/1/Hauton_et_al_Mol_Immunol_2006.pdf |
geographic |
Pacific |
geographic_facet |
Pacific |
genre |
European lobster Homarus gammarus |
genre_facet |
European lobster Homarus gammarus |
op_relation |
https://eprints.soton.ac.uk/24111/1/Hauton_et_al_Mol_Immunol_2006.pdf Hauton, C., Brockton, V. and Smith, V.J. (2005) Cloning of a crustin-like, single whey-acidic-domain, antibacterial peptide from the haemocytes of the European lobster, Homarus gammarus, and its response to infection with bacteria. Molecular Immunology, 43 (9), 1490-1496. (doi:10.1016/j.molimm.2005.07.029 <http://dx.doi.org/10.1016/j.molimm.2005.07.029>). |
op_doi |
https://doi.org/10.1016/j.molimm.2005.07.029 |
container_title |
Molecular Immunology |
container_volume |
43 |
container_issue |
9 |
container_start_page |
1490 |
op_container_end_page |
1496 |
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1772814344006926336 |