A 26-year time series of mortality and growth of the Pacific oyster C. gigas recorded along French coasts

International audience Abstract We used a compiled data set from a monitoring network of oyster production coordinated by IFREMER (the French Research Institute for the Exploitation of the Sea). This network monitors the growth and mortality of the Pacific oyster Crassostrea gigas along French coast...

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Published in:Scientific Data
Main Authors: Mazaleyrat, Anna, Normand, Julien, Dubroca, Laurent, Fleury, Elodie
Other Authors: Biologie des Organismes et Ecosystèmes Aquatiques (BOREA), Université de Caen Normandie (UNICAEN), Normandie Université (NU)-Normandie Université (NU)-Muséum national d'Histoire naturelle (MNHN)-Institut de Recherche pour le Développement (IRD)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université des Antilles (UA), Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER), Direction Générale de l’Agriculture et de l’Alimentation » (DGAL) and "Direction des pêches maritimes et de l’aquaculture” (DPMA) from the French Ministry
Format: Article in Journal/Newspaper
Language:English
Published: HAL CCSD 2022
Subjects:
Online Access:https://hal.univ-brest.fr/hal-04199053
https://doi.org/10.1038/s41597-022-01511-2
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spelling ftsorbonneuniv:oai:HAL:hal-04199053v1 2023-12-17T10:29:12+01:00 A 26-year time series of mortality and growth of the Pacific oyster C. gigas recorded along French coasts Mazaleyrat, Anna Normand, Julien Dubroca, Laurent Fleury, Elodie Biologie des Organismes et Ecosystèmes Aquatiques (BOREA) Université de Caen Normandie (UNICAEN) Normandie Université (NU)-Normandie Université (NU)-Muséum national d'Histoire naturelle (MNHN)-Institut de Recherche pour le Développement (IRD)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université des Antilles (UA) Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER) Direction Générale de l’Agriculture et de l’Alimentation » (DGAL) and "Direction des pêches maritimes et de l’aquaculture” (DPMA) from the French Ministry 2022-12 https://hal.univ-brest.fr/hal-04199053 https://doi.org/10.1038/s41597-022-01511-2 en eng HAL CCSD Nature Publishing Group info:eu-repo/semantics/altIdentifier/doi/10.1038/s41597-022-01511-2 hal-04199053 https://hal.univ-brest.fr/hal-04199053 doi:10.1038/s41597-022-01511-2 ISSN: 2052-4463 EISSN: 2052-4463 Scientific Data https://hal.univ-brest.fr/hal-04199053 Scientific Data , 2022, 9 (1), pp.392. ⟨10.1038/s41597-022-01511-2⟩ [SDV]Life Sciences [q-bio] info:eu-repo/semantics/article Journal articles 2022 ftsorbonneuniv https://doi.org/10.1038/s41597-022-01511-2 2023-11-21T23:39:29Z International audience Abstract We used a compiled data set from a monitoring network of oyster production coordinated by IFREMER (the French Research Institute for the Exploitation of the Sea). This network monitors the growth and mortality of the Pacific oyster Crassostrea gigas along French coasts since 1993. The archive, although publicly available, has been challenging to use due to changes in protocols and little information on metadata. Here, we describe data collection for almost 30 years, cleaning and processing. For 13 locations, we modeled growth and mortality of spat (less than one-year-old individuals) and half-grown oysters (between one and two-year-old individuals) as a function of time to cope with changes in data acquisition frequency, and produced standardized annual growth and cumulative mortality indicators to improve data usability. This improved database is expected to be used by ecologists interested in the evolution of life-cycle indicators of a marine species under the influence of climate change. It can also be valuable for epidemiologists because mortality data traces the emergence and spread of a massive epizootic. Article in Journal/Newspaper Crassostrea gigas Pacific oyster HAL Sorbonne Université Pacific Scientific Data 9 1
institution Open Polar
collection HAL Sorbonne Université
op_collection_id ftsorbonneuniv
language English
topic [SDV]Life Sciences [q-bio]
spellingShingle [SDV]Life Sciences [q-bio]
Mazaleyrat, Anna
Normand, Julien
Dubroca, Laurent
Fleury, Elodie
A 26-year time series of mortality and growth of the Pacific oyster C. gigas recorded along French coasts
topic_facet [SDV]Life Sciences [q-bio]
description International audience Abstract We used a compiled data set from a monitoring network of oyster production coordinated by IFREMER (the French Research Institute for the Exploitation of the Sea). This network monitors the growth and mortality of the Pacific oyster Crassostrea gigas along French coasts since 1993. The archive, although publicly available, has been challenging to use due to changes in protocols and little information on metadata. Here, we describe data collection for almost 30 years, cleaning and processing. For 13 locations, we modeled growth and mortality of spat (less than one-year-old individuals) and half-grown oysters (between one and two-year-old individuals) as a function of time to cope with changes in data acquisition frequency, and produced standardized annual growth and cumulative mortality indicators to improve data usability. This improved database is expected to be used by ecologists interested in the evolution of life-cycle indicators of a marine species under the influence of climate change. It can also be valuable for epidemiologists because mortality data traces the emergence and spread of a massive epizootic.
author2 Biologie des Organismes et Ecosystèmes Aquatiques (BOREA)
Université de Caen Normandie (UNICAEN)
Normandie Université (NU)-Normandie Université (NU)-Muséum national d'Histoire naturelle (MNHN)-Institut de Recherche pour le Développement (IRD)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université des Antilles (UA)
Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)
Direction Générale de l’Agriculture et de l’Alimentation » (DGAL) and "Direction des pêches maritimes et de l’aquaculture” (DPMA) from the French Ministry
format Article in Journal/Newspaper
author Mazaleyrat, Anna
Normand, Julien
Dubroca, Laurent
Fleury, Elodie
author_facet Mazaleyrat, Anna
Normand, Julien
Dubroca, Laurent
Fleury, Elodie
author_sort Mazaleyrat, Anna
title A 26-year time series of mortality and growth of the Pacific oyster C. gigas recorded along French coasts
title_short A 26-year time series of mortality and growth of the Pacific oyster C. gigas recorded along French coasts
title_full A 26-year time series of mortality and growth of the Pacific oyster C. gigas recorded along French coasts
title_fullStr A 26-year time series of mortality and growth of the Pacific oyster C. gigas recorded along French coasts
title_full_unstemmed A 26-year time series of mortality and growth of the Pacific oyster C. gigas recorded along French coasts
title_sort 26-year time series of mortality and growth of the pacific oyster c. gigas recorded along french coasts
publisher HAL CCSD
publishDate 2022
url https://hal.univ-brest.fr/hal-04199053
https://doi.org/10.1038/s41597-022-01511-2
geographic Pacific
geographic_facet Pacific
genre Crassostrea gigas
Pacific oyster
genre_facet Crassostrea gigas
Pacific oyster
op_source ISSN: 2052-4463
EISSN: 2052-4463
Scientific Data
https://hal.univ-brest.fr/hal-04199053
Scientific Data , 2022, 9 (1), pp.392. ⟨10.1038/s41597-022-01511-2⟩
op_relation info:eu-repo/semantics/altIdentifier/doi/10.1038/s41597-022-01511-2
hal-04199053
https://hal.univ-brest.fr/hal-04199053
doi:10.1038/s41597-022-01511-2
op_doi https://doi.org/10.1038/s41597-022-01511-2
container_title Scientific Data
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