Seascape genomics reveals population isolation in the reef-building honeycomb worm, Sabellaria alveolata (L.)

• Published in: BMC Evolutionary Biology
• Main Authors: Muir, Anna, P, Dubois, Stanislas, F, Ross, Rebecca, E, Firth, Louise, B, Knights, Antony, M, Lima, Fernando, P, Seabra, Rui, Corre, Erwan, Le Corguillé, Gildas, Nunes, Flavia, L D
• Other Authors: Laboratoire des Sciences de l'Environnement Marin (LEMAR) (LEMAR), Institut de Recherche pour le Développement (IRD)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Université de Brest (UBO)-Institut Universitaire Européen de la Mer (IUEM), Institut de Recherche pour le Développement (IRD)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Brest (UBO)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Brest (UBO)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS), University of Chester, Unité Dynamiques des Écosystèmes Côtiers (DYNECO), Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER), Plymouth University, Institute of Marine Research Bergen (IMR), University of Bergen (UiB), Universidade do Porto = University of Porto, ABiMS - Informatique et bioinformatique = Analysis and Bioinformatics for Marine Science (ABIMS), Fédération de recherche de Roscoff (FR2424), Station biologique de Roscoff = Roscoff Marine Station (SBR), Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Station biologique de Roscoff = Roscoff Marine Station (SBR), Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), FEDER funds through COMPETE POCI-01-0145-FEDER-031088, Portuguese national funds through FCT PTDC/BIA-BMA/31088/2017PTDC/BIA-BMA/31053/2017, FEDER funds through POR Norte NORTE-01-0145-FEDE R-031053, "Laboratoire d'Excellence" LabexMER ANR-10-LABX-19, ANR-10-LABX-0019,LabexMER,LabexMER Marine Excellence Research: a changing ocean(2010)
• Format: Article in Journal/Newspaper
• Language: English
• Published: HAL CCSD 2020
• Subjects: RADseq; Ocean circulation modelling; Adaptation; Marine invertebrate; Larval dispersal; ACL; [SDU.OCEAN]Sciences of the Universe [physics]/Ocean; Atmosphere; [SDE.BE]Environmental Sciences/Biodiversity and Ecology; [SDV.BA]Life Sciences [q-bio]/Animal biology; north atlantic current; North Atlantic
• Online Access: https://hal.univ-brest.fr/hal-02935188; https://hal.univ-brest.fr/hal-02935188/document; https://hal.univ-brest.fr/hal-02935188/file/s12862-020-01658-9.pdf; https://doi.org/10.1186/s12862-020-01658-9

International audience Background: Under the threat of climate change populations can disperse, acclimatise or evolve in order to avoid fitness loss. In light of this, it is important to understand neutral gene flow patterns as a measure of dispersal potential, but also adaptive genetic variation as a measure of evolutionary potential. In order to assess genetic variation and how this relates to environment in the honeycomb worm (Sabellaria alveolata (L.)), a reef-building polychaete that supports high biodiversity, we carried out RAD sequencing using individuals from along its complete latitudinal range. Patterns of neutral population genetic structure were compared to larval dispersal as predicted by ocean circulation modelling, and outlier analyses and genotype-environment association tests were used to attempt to identify loci under selection in relation to local temperature data. Results: We genotyped 482 filtered SNPs, from 68 individuals across nine sites, 27 of which were identified as outliers using BAYESCAN and ARLEQUIN. All outlier loci were potentially under balancing selection, despite previous evidence of local adaptation in the system. Limited gene flow was observed among reef-sites (F ST = 0.28 ± 0.10), in line with the low dispersal potential identified by the larval dispersal models. The North Atlantic reef emerged as a distinct population and this was linked to high local larval retention and the effect of the North Atlantic Current on dispersal. Conclusions: As an isolated population, with limited potential for natural genetic or demographic augmentation from other reefs, the North Atlantic site warrants conservation attention in order to preserve not only this species, but above all the crucial functional ecological roles that are associated with their bioconstructions. Our study highlights the utility of using seascape genomics to identify populations of conservation concern.