Seasonal dynamics of algal infecting viruses in the Skagerrak, North Atlantic and inferred interactions with protists. Supplementary files.
Table S1. Algal virus major capsid protein (MCP) OTUs at station OF2 at the outer Oslofjorden, Norway during March 2010 - June 2011, with number of reads in each sample and its taxonomic placement. OTUs marked in red were removed after subsampling. File S1. Fasta file with virus MCP amino acid (AA)...
Main Authors: | , , , , , |
---|---|
Format: | Dataset |
Language: | unknown |
Published: |
2021
|
Subjects: | |
Online Access: | https://doi.org/10.6084/m9.figshare.7392401.v1 |
id |
ftsmithonian:oai:figshare.com:article/7392401 |
---|---|
record_format |
openpolar |
spelling |
ftsmithonian:oai:figshare.com:article/7392401 2023-05-15T17:32:28+02:00 Seasonal dynamics of algal infecting viruses in the Skagerrak, North Atlantic and inferred interactions with protists. Supplementary files. Sandra Gran (4170289) Anders K. Krabberød (6017290) Ruth-Anne Sandaa (6017293) Sheree Yau (6017294) Elianne Egge (3938450) Bente Edvardsen (2215753) 2021-05-07T13:15:17Z https://doi.org/10.6084/m9.figshare.7392401.v1 unknown https://figshare.com/articles/dataset/Seasonal_dynamics_of_algal_infecting_viruses_in_the_Skagerrak_North_Atlantic_and_inferred_interactions_with_protists_Supplementary_files_/7392401 doi:10.6084/m9.figshare.7392401.v1 CC BY 4.0 CC-BY Marine Biology Marine and Estuarine Ecology (incl. Marine Ichthyology) Microbial Genetics Microbial Ecology Phycodnaviridae Mimiviridae Oslofjorden metabarcoding fasta sequences OTU-table Dataset 2021 ftsmithonian https://doi.org/10.6084/m9.figshare.7392401.v1 2021-05-21T15:25:25Z Table S1. Algal virus major capsid protein (MCP) OTUs at station OF2 at the outer Oslofjorden, Norway during March 2010 - June 2011, with number of reads in each sample and its taxonomic placement. OTUs marked in red were removed after subsampling. File S1. Fasta file with virus MCP amino acid (AA) alignment used for complete phylogenetic tree in Figure S2. File S2. Fasta file with virus MCP AA alignment used for phylogenetic tree with the 22 most abundant OTUs in Figure 1. Figure S2. Phylogenetic tree (FastTree2) based on available Phycodnaviridae and Mimiviridae MCP reference sequences (black), virus OTUs found in a previous study in Raunefjorden, Norway (blue, Larsen et al. 2008) and all algal viruses OTUs obtained from Outer Oslofjorden, OF2 (red). Dataset North Atlantic Unknown Norway |
institution |
Open Polar |
collection |
Unknown |
op_collection_id |
ftsmithonian |
language |
unknown |
topic |
Marine Biology Marine and Estuarine Ecology (incl. Marine Ichthyology) Microbial Genetics Microbial Ecology Phycodnaviridae Mimiviridae Oslofjorden metabarcoding fasta sequences OTU-table |
spellingShingle |
Marine Biology Marine and Estuarine Ecology (incl. Marine Ichthyology) Microbial Genetics Microbial Ecology Phycodnaviridae Mimiviridae Oslofjorden metabarcoding fasta sequences OTU-table Sandra Gran (4170289) Anders K. Krabberød (6017290) Ruth-Anne Sandaa (6017293) Sheree Yau (6017294) Elianne Egge (3938450) Bente Edvardsen (2215753) Seasonal dynamics of algal infecting viruses in the Skagerrak, North Atlantic and inferred interactions with protists. Supplementary files. |
topic_facet |
Marine Biology Marine and Estuarine Ecology (incl. Marine Ichthyology) Microbial Genetics Microbial Ecology Phycodnaviridae Mimiviridae Oslofjorden metabarcoding fasta sequences OTU-table |
description |
Table S1. Algal virus major capsid protein (MCP) OTUs at station OF2 at the outer Oslofjorden, Norway during March 2010 - June 2011, with number of reads in each sample and its taxonomic placement. OTUs marked in red were removed after subsampling. File S1. Fasta file with virus MCP amino acid (AA) alignment used for complete phylogenetic tree in Figure S2. File S2. Fasta file with virus MCP AA alignment used for phylogenetic tree with the 22 most abundant OTUs in Figure 1. Figure S2. Phylogenetic tree (FastTree2) based on available Phycodnaviridae and Mimiviridae MCP reference sequences (black), virus OTUs found in a previous study in Raunefjorden, Norway (blue, Larsen et al. 2008) and all algal viruses OTUs obtained from Outer Oslofjorden, OF2 (red). |
format |
Dataset |
author |
Sandra Gran (4170289) Anders K. Krabberød (6017290) Ruth-Anne Sandaa (6017293) Sheree Yau (6017294) Elianne Egge (3938450) Bente Edvardsen (2215753) |
author_facet |
Sandra Gran (4170289) Anders K. Krabberød (6017290) Ruth-Anne Sandaa (6017293) Sheree Yau (6017294) Elianne Egge (3938450) Bente Edvardsen (2215753) |
author_sort |
Sandra Gran (4170289) |
title |
Seasonal dynamics of algal infecting viruses in the Skagerrak, North Atlantic and inferred interactions with protists. Supplementary files. |
title_short |
Seasonal dynamics of algal infecting viruses in the Skagerrak, North Atlantic and inferred interactions with protists. Supplementary files. |
title_full |
Seasonal dynamics of algal infecting viruses in the Skagerrak, North Atlantic and inferred interactions with protists. Supplementary files. |
title_fullStr |
Seasonal dynamics of algal infecting viruses in the Skagerrak, North Atlantic and inferred interactions with protists. Supplementary files. |
title_full_unstemmed |
Seasonal dynamics of algal infecting viruses in the Skagerrak, North Atlantic and inferred interactions with protists. Supplementary files. |
title_sort |
seasonal dynamics of algal infecting viruses in the skagerrak, north atlantic and inferred interactions with protists. supplementary files. |
publishDate |
2021 |
url |
https://doi.org/10.6084/m9.figshare.7392401.v1 |
geographic |
Norway |
geographic_facet |
Norway |
genre |
North Atlantic |
genre_facet |
North Atlantic |
op_relation |
https://figshare.com/articles/dataset/Seasonal_dynamics_of_algal_infecting_viruses_in_the_Skagerrak_North_Atlantic_and_inferred_interactions_with_protists_Supplementary_files_/7392401 doi:10.6084/m9.figshare.7392401.v1 |
op_rights |
CC BY 4.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.6084/m9.figshare.7392401.v1 |
_version_ |
1766130625148878848 |