Seasonal dynamics of algal infecting viruses in the Skagerrak, North Atlantic and inferred interactions with protists. Supplementary files.

Table S1. Algal virus major capsid protein (MCP) OTUs at station OF2 at the outer Oslofjorden, Norway during March 2010 - June 2011, with number of reads in each sample and its taxonomic placement. OTUs marked in red were removed after subsampling. File S1. Fasta file with virus MCP amino acid (AA)...

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Main Authors: Sandra Gran (4170289), Anders K. Krabberød (6017290), Ruth-Anne Sandaa (6017293), Sheree Yau (6017294), Elianne Egge (3938450), Bente Edvardsen (2215753)
Format: Dataset
Language:unknown
Published: 2021
Subjects:
Online Access:https://doi.org/10.6084/m9.figshare.7392401.v1
id ftsmithonian:oai:figshare.com:article/7392401
record_format openpolar
spelling ftsmithonian:oai:figshare.com:article/7392401 2023-05-15T17:32:28+02:00 Seasonal dynamics of algal infecting viruses in the Skagerrak, North Atlantic and inferred interactions with protists. Supplementary files. Sandra Gran (4170289) Anders K. Krabberød (6017290) Ruth-Anne Sandaa (6017293) Sheree Yau (6017294) Elianne Egge (3938450) Bente Edvardsen (2215753) 2021-05-07T13:15:17Z https://doi.org/10.6084/m9.figshare.7392401.v1 unknown https://figshare.com/articles/dataset/Seasonal_dynamics_of_algal_infecting_viruses_in_the_Skagerrak_North_Atlantic_and_inferred_interactions_with_protists_Supplementary_files_/7392401 doi:10.6084/m9.figshare.7392401.v1 CC BY 4.0 CC-BY Marine Biology Marine and Estuarine Ecology (incl. Marine Ichthyology) Microbial Genetics Microbial Ecology Phycodnaviridae Mimiviridae Oslofjorden metabarcoding fasta sequences OTU-table Dataset 2021 ftsmithonian https://doi.org/10.6084/m9.figshare.7392401.v1 2021-05-21T15:25:25Z Table S1. Algal virus major capsid protein (MCP) OTUs at station OF2 at the outer Oslofjorden, Norway during March 2010 - June 2011, with number of reads in each sample and its taxonomic placement. OTUs marked in red were removed after subsampling. File S1. Fasta file with virus MCP amino acid (AA) alignment used for complete phylogenetic tree in Figure S2. File S2. Fasta file with virus MCP AA alignment used for phylogenetic tree with the 22 most abundant OTUs in Figure 1. Figure S2. Phylogenetic tree (FastTree2) based on available Phycodnaviridae and Mimiviridae MCP reference sequences (black), virus OTUs found in a previous study in Raunefjorden, Norway (blue, Larsen et al. 2008) and all algal viruses OTUs obtained from Outer Oslofjorden, OF2 (red). Dataset North Atlantic Unknown Norway
institution Open Polar
collection Unknown
op_collection_id ftsmithonian
language unknown
topic Marine Biology
Marine and Estuarine Ecology (incl. Marine Ichthyology)
Microbial Genetics
Microbial Ecology
Phycodnaviridae
Mimiviridae
Oslofjorden
metabarcoding
fasta sequences
OTU-table
spellingShingle Marine Biology
Marine and Estuarine Ecology (incl. Marine Ichthyology)
Microbial Genetics
Microbial Ecology
Phycodnaviridae
Mimiviridae
Oslofjorden
metabarcoding
fasta sequences
OTU-table
Sandra Gran (4170289)
Anders K. Krabberød (6017290)
Ruth-Anne Sandaa (6017293)
Sheree Yau (6017294)
Elianne Egge (3938450)
Bente Edvardsen (2215753)
Seasonal dynamics of algal infecting viruses in the Skagerrak, North Atlantic and inferred interactions with protists. Supplementary files.
topic_facet Marine Biology
Marine and Estuarine Ecology (incl. Marine Ichthyology)
Microbial Genetics
Microbial Ecology
Phycodnaviridae
Mimiviridae
Oslofjorden
metabarcoding
fasta sequences
OTU-table
description Table S1. Algal virus major capsid protein (MCP) OTUs at station OF2 at the outer Oslofjorden, Norway during March 2010 - June 2011, with number of reads in each sample and its taxonomic placement. OTUs marked in red were removed after subsampling. File S1. Fasta file with virus MCP amino acid (AA) alignment used for complete phylogenetic tree in Figure S2. File S2. Fasta file with virus MCP AA alignment used for phylogenetic tree with the 22 most abundant OTUs in Figure 1. Figure S2. Phylogenetic tree (FastTree2) based on available Phycodnaviridae and Mimiviridae MCP reference sequences (black), virus OTUs found in a previous study in Raunefjorden, Norway (blue, Larsen et al. 2008) and all algal viruses OTUs obtained from Outer Oslofjorden, OF2 (red).
format Dataset
author Sandra Gran (4170289)
Anders K. Krabberød (6017290)
Ruth-Anne Sandaa (6017293)
Sheree Yau (6017294)
Elianne Egge (3938450)
Bente Edvardsen (2215753)
author_facet Sandra Gran (4170289)
Anders K. Krabberød (6017290)
Ruth-Anne Sandaa (6017293)
Sheree Yau (6017294)
Elianne Egge (3938450)
Bente Edvardsen (2215753)
author_sort Sandra Gran (4170289)
title Seasonal dynamics of algal infecting viruses in the Skagerrak, North Atlantic and inferred interactions with protists. Supplementary files.
title_short Seasonal dynamics of algal infecting viruses in the Skagerrak, North Atlantic and inferred interactions with protists. Supplementary files.
title_full Seasonal dynamics of algal infecting viruses in the Skagerrak, North Atlantic and inferred interactions with protists. Supplementary files.
title_fullStr Seasonal dynamics of algal infecting viruses in the Skagerrak, North Atlantic and inferred interactions with protists. Supplementary files.
title_full_unstemmed Seasonal dynamics of algal infecting viruses in the Skagerrak, North Atlantic and inferred interactions with protists. Supplementary files.
title_sort seasonal dynamics of algal infecting viruses in the skagerrak, north atlantic and inferred interactions with protists. supplementary files.
publishDate 2021
url https://doi.org/10.6084/m9.figshare.7392401.v1
geographic Norway
geographic_facet Norway
genre North Atlantic
genre_facet North Atlantic
op_relation https://figshare.com/articles/dataset/Seasonal_dynamics_of_algal_infecting_viruses_in_the_Skagerrak_North_Atlantic_and_inferred_interactions_with_protists_Supplementary_files_/7392401
doi:10.6084/m9.figshare.7392401.v1
op_rights CC BY 4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.6084/m9.figshare.7392401.v1
_version_ 1766130625148878848