Phylogenetic relationship of GATAd proteins in insects and mammals.

• Main Authors: Le Guo (320752), Zhouqiang Cheng (12042810), Jianying Qin (12042813), Dan Sun (140898), Shaoli Wang (104837), Qingjun Wu (104839), Neil Crickmore (11408795), Xuguo Zhou (104854), Alejandra Bravo (322909), Mario Soberón (322907), Zhaojiang Guo (722032), Youjun Zhang (104855)
• Format: Other Non-Article Part of Journal/Newspaper
• Language: unknown
• Published: 2022
• Subjects: Medicine; Microbiology; Cell Biology; Genetics; Molecular Biology; Biotechnology; Ecology; Developmental Biology; Cancer; Science Policy; Hematology; Infectious Diseases; Plant Biology; Computational Biology; Environmental Sciences not elsewhere classified; Biological Sciences not elsewhere classified; transgenic crops based; nucleotide insertion mutation; div >< p; >- response element; >- acting elements; >- acting element; intricate regulatory mechanism; >- regulatory factors; susceptible larvae reduced; insect resistance evolution; plutella xylostella </; bacillus thuringiensis </; pxgatad transcription factor; pxgatad directly activates; mapk signaling pathway; expression via interacting; cry1ac resistance development; resistant strain resulted; bt cry1ac toxin; cry1ac toxin; cry1ac susceptible; cry1ac resistance; regulatory performance; pxgatad </; resistant strains; resistance phenotype; trans </; pxmap4k4 </; pxmalp </; cis </; transcriptional activity; sustainable utilization; study deciphers; specific gata; negatively regulated; insecticidal cry; great significance; gene expression; differential expression; diamondback moth; considerably threatened; concurrent involvement; bt products; >; indicating; Gata; Red Star; Canis lupus
• Online Access: https://doi.org/10.1371/journal.pgen.1010037.s003

Phylogenetic analysis of the GATAd genes was performed by maximum likelihood method. The GATAd encoding sequence was corrected using NCBI database and transcriptome data of P . xylostella and then cloned from fourth-instar larvae. PxGATAd is indicated by a red star. Full-length amino acid sequences of GATAd genes were retrieved from the GenBank database. Abbreviation: 1. Hymenoptera [ Am ( Apis mellifera , XP_001120276.2); Cf ( Camponotus floridanus , XP_025270700.1); Bte ( Bombus terrestris , XP_003400693.1); Mr ( Megachile rotundata , XP_003708269.1); Nf ( Nylanderia fulva , XP_029159148.1); Ae ( Acromyrmex echinatior , XP_011057942.1); Hsal ( Harpegnathos saltator , XP_011148075.1); Hh ( Halyomorpha halys , XP_014279044.1); Cl ( Cimex lectularius , XP_014261884.1)]; 2. Anoplura [ Phc ( Pediculus humanus corporis , XP_002428265.1]; 3. Coleoptera [ Dpo ( Dendroctonus ponderosae , XP_019764087.1); Ld ( Leptinotarsa decemlineata , XP_023023616.1); Atu ( Aethina tumida , XP_019881566.1); Nv ( Nicrophorus vespilloides , XP_017769919.1); Apl ( Agrilus planipennis , XP_018334804.1); Tc ( Tribolium castaneum , EFA09251.2); Ot ( Onthophagus taurus , XP_022900328.1); Ob ( Oryctes borbonicus , KRT80118.1)]; 4. Lepidoptera [ Dpl ( Danaus plexippus , OWR52456.1); Pr ( Pieris rapae , XP_022123638.1); Pxy ( Plutella xylostella , MZ712004); Atr ( Amyelois transitella , XP_013199688.1); Pm ( Papilio machaon , XP_014367479.1); Pxu ( Papilio xuthus , XP_013169273.1); Bm ( Bombyx mori , XP_012546211.1); Ha ( Helicoverpa armigera , XP_021183187.1); Sl ( Spodoptera litura , XP_022834873.1); Tn ( Trichoplusia ni , XP_026725121.1)]; 5. Diptera [ Aa ( Aedes aegypti , EAT41982.1); Cq ( Culex quinquefasciatus , EDS42992.1); Dm ( Drosophila melanogaster , NP_001260326.1); Cc ( Ceratitis capitata , XP_004537903.1); Zc ( Zeugodacus cucurbitae , XP_011186611.2)]; 6. Mammalia [ Ss ( Sus scrofa , NP_999458.1); Fc ( Felis catus , XP_011279866.2); Bta ( Bos taurus , CAC69835.1); Oc ( Oryctolagus cuniculus , XP_008247101.1); Clu ( Canis lupus , XP_025318689.1); Mm ( Mus musculus , BAE22221.1); Hsap ( Homo sapiens , NP_001295023.1); Rn ( Rattus norvegicus , XP_006252251.1)]. (PDF)