Additional file 9 of ddRAD-seq reveals the genetic structure and detects signals of selection in Italian brown trout

• Main Authors: Gabriele Magris (3574997), Fabio Marroni (11761985), Edo D’Agaro (12027279), Massimo Vischi (11057173), Cristina Chiabà (12027282), Davide Scaglione (5106677), James Kijas (216935), Maria Messina (763206), Emilio Tibaldi (12027285), Michele Morgante (12027288)
• Format: Dataset
• Language: unknown
• Published: 2022
• Subjects: Genetics; water fish species; informed breeding programs; endemic gene pool; dense genotyping data; apparently high levels; several regions putatively; several regions associated; increasing gene diversity; constitute candidate regions; identified putative signatures; detected putative signatures; endemic italian trout; stocking ); confirm; introduced strong admixture; controlling stocking practices; brown trout populations; results also show; stocking practices; stocking populations; italian populations; farmed trout; snps ); show evidence; genetic diversity; detect signatures; studied populations; local populations; widespread fresh; take action; seq reveals; seq approach; population structure; phylogenetic relationships; information deriving; infectious diseases; heterozygosity across; help genotype; heavily influenced; genetic structure; genes involved; functional categories; evolutionary history; distinct lineages; different ways; detects signals; atlantic lineage; Salmo salar
• Online Access: https://doi.org/10.6084/m9.figshare.19101717.v1

Additional file 9: Table S5. Anchored linkage map of Salmo trutta. Linkage map of Salmo trutta, anchored on the Salmo salar genome as in the original study [38], and on the Salmo trutta genome as performed in the present study. The last six columns report the mean heterozygosity for the whole dataset and for each of the five lineages, respectively.