Spearman’s correlation coefficient ( r ) between nucleotide diversity ( π
RR : recombination rate; B : B statistic; P : proportion of polymorphic nucleotides; MAF: Minor Allele Frequency; LoF : number of Loss of Function variants; missense : number of missense variants; gene dens : gene density. Estimates are based on samples of n = 99 for Finnish and n = 16 for Koryaks p...
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ftsmithonian:oai:figshare.com:article/19067089 2023-05-15T17:05:21+02:00 Spearman’s correlation coefficient ( r ) between nucleotide diversity ( π panel a) or estimates of linkage disequilibrium effective population size ( N eLD panel b) and different diversity variables, estimated within genomic regions. Irene Novo (11999512) Enrique Santiago (11656907) Armando Caballero (439234) 2022-01-25T18:41:08Z https://doi.org/10.1371/journal.pgen.1009764.g005 unknown https://figshare.com/articles/figure/Spearman_s_correlation_coefficient_i_r_i_between_nucleotide_diversity_i_i_panel_a_or_estimates_of_linkage_disequilibrium_effective_population_size_i_N_i_sub_i_eLD_i_sub_panel_b_and_different_diversity_variables_estimated_within_genomic_regi/19067089 doi:10.1371/journal.pgen.1009764.g005 CC BY 4.0 CC-BY Genetics Evolutionary Biology Ecology Science Policy Infectious Diseases Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified minor allele frequency >< sub >< ></ sub > ></ sub >) particular genomic regions ld </ sub div >< p background selection statistic recombination rate heterogeneity ></ sub recombination rate different regions n </ e </ virtually unaffected strongly affected simulation results reduce diversity polymorphic sites nucleotide diversity missense variants linkage disequilibrium key parameter increasing availability important implications human evolution human demography human data genetic drift gene density diversity parameters directional selection computer simulations coalescence mutation based methods Image Figure 2022 ftsmithonian https://doi.org/10.1371/journal.pgen.1009764.g005 2022-02-07T17:29:20Z RR : recombination rate; B : B statistic; P : proportion of polymorphic nucleotides; MAF: Minor Allele Frequency; LoF : number of Loss of Function variants; missense : number of missense variants; gene dens : gene density. Estimates are based on samples of n = 99 for Finnish and n = 16 for Koryaks populations. P-values: * < 0.05, *** <0.001. Still Image Koryaks Unknown |
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Open Polar |
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ftsmithonian |
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Genetics Evolutionary Biology Ecology Science Policy Infectious Diseases Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified minor allele frequency >< sub >< ></ sub > ></ sub >) particular genomic regions ld </ sub div >< p background selection statistic recombination rate heterogeneity ></ sub recombination rate different regions n </ e </ virtually unaffected strongly affected simulation results reduce diversity polymorphic sites nucleotide diversity missense variants linkage disequilibrium key parameter increasing availability important implications human evolution human demography human data genetic drift gene density diversity parameters directional selection computer simulations coalescence mutation based methods |
spellingShingle |
Genetics Evolutionary Biology Ecology Science Policy Infectious Diseases Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified minor allele frequency >< sub >< ></ sub > ></ sub >) particular genomic regions ld </ sub div >< p background selection statistic recombination rate heterogeneity ></ sub recombination rate different regions n </ e </ virtually unaffected strongly affected simulation results reduce diversity polymorphic sites nucleotide diversity missense variants linkage disequilibrium key parameter increasing availability important implications human evolution human demography human data genetic drift gene density diversity parameters directional selection computer simulations coalescence mutation based methods Irene Novo (11999512) Enrique Santiago (11656907) Armando Caballero (439234) Spearman’s correlation coefficient ( r ) between nucleotide diversity ( π |
topic_facet |
Genetics Evolutionary Biology Ecology Science Policy Infectious Diseases Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified minor allele frequency >< sub >< ></ sub > ></ sub >) particular genomic regions ld </ sub div >< p background selection statistic recombination rate heterogeneity ></ sub recombination rate different regions n </ e </ virtually unaffected strongly affected simulation results reduce diversity polymorphic sites nucleotide diversity missense variants linkage disequilibrium key parameter increasing availability important implications human evolution human demography human data genetic drift gene density diversity parameters directional selection computer simulations coalescence mutation based methods |
description |
RR : recombination rate; B : B statistic; P : proportion of polymorphic nucleotides; MAF: Minor Allele Frequency; LoF : number of Loss of Function variants; missense : number of missense variants; gene dens : gene density. Estimates are based on samples of n = 99 for Finnish and n = 16 for Koryaks populations. P-values: * < 0.05, *** <0.001. |
format |
Still Image |
author |
Irene Novo (11999512) Enrique Santiago (11656907) Armando Caballero (439234) |
author_facet |
Irene Novo (11999512) Enrique Santiago (11656907) Armando Caballero (439234) |
author_sort |
Irene Novo (11999512) |
title |
Spearman’s correlation coefficient ( r ) between nucleotide diversity ( π |
title_short |
Spearman’s correlation coefficient ( r ) between nucleotide diversity ( π |
title_full |
Spearman’s correlation coefficient ( r ) between nucleotide diversity ( π |
title_fullStr |
Spearman’s correlation coefficient ( r ) between nucleotide diversity ( π |
title_full_unstemmed |
Spearman’s correlation coefficient ( r ) between nucleotide diversity ( π |
title_sort |
spearman’s correlation coefficient ( r ) between nucleotide diversity ( π |
publishDate |
2022 |
url |
https://doi.org/10.1371/journal.pgen.1009764.g005 |
genre |
Koryaks |
genre_facet |
Koryaks |
op_relation |
https://figshare.com/articles/figure/Spearman_s_correlation_coefficient_i_r_i_between_nucleotide_diversity_i_i_panel_a_or_estimates_of_linkage_disequilibrium_effective_population_size_i_N_i_sub_i_eLD_i_sub_panel_b_and_different_diversity_variables_estimated_within_genomic_regi/19067089 doi:10.1371/journal.pgen.1009764.g005 |
op_rights |
CC BY 4.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1371/journal.pgen.1009764.g005 |
_version_ |
1766059855721791488 |