Maximum likelihood tree based on the partial 16S rRNA gene sequences of the 11 Pseudomonas strains and closely related validly published strains of the Pseudomonas genus obtained from NCBI database.
The 11 Pseudomonas strains show clustering with both P . fluorescens and P . antarctica . E . coli K12 MG1655 was used as the outgroup organism. The tree was constructed using MEGA X software based on the Kimura 2-parameter model with 1000 bootstrap replications, and the scale bar corresponds to the...
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ftsmithonian:oai:figshare.com:article/19021497 2023-05-15T14:04:45+02:00 Maximum likelihood tree based on the partial 16S rRNA gene sequences of the 11 Pseudomonas strains and closely related validly published strains of the Pseudomonas genus obtained from NCBI database. Srijana Mukhia (9025058) Anil Kumar (105720) Poonam Kumari (6175139) Rakshak Kumar (125841) Sanjay Kumar (8853) 2022-01-24T18:29:42Z https://doi.org/10.1371/journal.pone.0261178.g002 unknown https://figshare.com/articles/figure/Maximum_likelihood_tree_based_on_the_partial_16S_rRNA_gene_sequences_of_the_11_i_Pseudomonas_i_strains_and_closely_related_validly_published_strains_of_the_i_Pseudomonas_i_genus_obtained_from_NCBI_database_/19021497 doi:10.1371/journal.pone.0261178.g002 CC BY 4.0 CC-BY Microbiology Genetics Biotechnology Evolutionary Biology Ecology Marine Biology Inorganic Chemistry Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified Chemical Sciences not elsewhere classified unique adaptive features mesophilic control strain extreme environmental conditions 96 hours compared 73 %) compared showed taxonomic ambiguity highest ani value high ultraviolet radiations div >< p pseudomonas antarctica </ obtained eleven strains pseudomonas </ p </ antarctica </ taxonomic assignment dddh value c radiations fluorescens </ tolerance abilities supraglacial site supraglacial ice sikkim himalaya representative strains radiation resistance polyadaptational attributes physiological findings pamc 27494 microorganisms inhabiting frequent freeze four strains diverse genera current study correct taxonomy biotechnologically significant based assays associated genes adaptational strategies active enzymes 65 %) 05 could Image Figure 2022 ftsmithonian https://doi.org/10.1371/journal.pone.0261178.g002 2022-02-07T17:36:48Z The 11 Pseudomonas strains show clustering with both P . fluorescens and P . antarctica . E . coli K12 MG1655 was used as the outgroup organism. The tree was constructed using MEGA X software based on the Kimura 2-parameter model with 1000 bootstrap replications, and the scale bar corresponds to the average number of nucleotide substitutions per site. Accession numbers are given in parenthesis. Still Image Antarc* Antarctica Unknown |
institution |
Open Polar |
collection |
Unknown |
op_collection_id |
ftsmithonian |
language |
unknown |
topic |
Microbiology Genetics Biotechnology Evolutionary Biology Ecology Marine Biology Inorganic Chemistry Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified Chemical Sciences not elsewhere classified unique adaptive features mesophilic control strain extreme environmental conditions 96 hours compared 73 %) compared showed taxonomic ambiguity highest ani value high ultraviolet radiations div >< p pseudomonas antarctica </ obtained eleven strains pseudomonas </ p </ antarctica </ taxonomic assignment dddh value c radiations fluorescens </ tolerance abilities supraglacial site supraglacial ice sikkim himalaya representative strains radiation resistance polyadaptational attributes physiological findings pamc 27494 microorganisms inhabiting frequent freeze four strains diverse genera current study correct taxonomy biotechnologically significant based assays associated genes adaptational strategies active enzymes 65 %) 05 could |
spellingShingle |
Microbiology Genetics Biotechnology Evolutionary Biology Ecology Marine Biology Inorganic Chemistry Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified Chemical Sciences not elsewhere classified unique adaptive features mesophilic control strain extreme environmental conditions 96 hours compared 73 %) compared showed taxonomic ambiguity highest ani value high ultraviolet radiations div >< p pseudomonas antarctica </ obtained eleven strains pseudomonas </ p </ antarctica </ taxonomic assignment dddh value c radiations fluorescens </ tolerance abilities supraglacial site supraglacial ice sikkim himalaya representative strains radiation resistance polyadaptational attributes physiological findings pamc 27494 microorganisms inhabiting frequent freeze four strains diverse genera current study correct taxonomy biotechnologically significant based assays associated genes adaptational strategies active enzymes 65 %) 05 could Srijana Mukhia (9025058) Anil Kumar (105720) Poonam Kumari (6175139) Rakshak Kumar (125841) Sanjay Kumar (8853) Maximum likelihood tree based on the partial 16S rRNA gene sequences of the 11 Pseudomonas strains and closely related validly published strains of the Pseudomonas genus obtained from NCBI database. |
topic_facet |
Microbiology Genetics Biotechnology Evolutionary Biology Ecology Marine Biology Inorganic Chemistry Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified Chemical Sciences not elsewhere classified unique adaptive features mesophilic control strain extreme environmental conditions 96 hours compared 73 %) compared showed taxonomic ambiguity highest ani value high ultraviolet radiations div >< p pseudomonas antarctica </ obtained eleven strains pseudomonas </ p </ antarctica </ taxonomic assignment dddh value c radiations fluorescens </ tolerance abilities supraglacial site supraglacial ice sikkim himalaya representative strains radiation resistance polyadaptational attributes physiological findings pamc 27494 microorganisms inhabiting frequent freeze four strains diverse genera current study correct taxonomy biotechnologically significant based assays associated genes adaptational strategies active enzymes 65 %) 05 could |
description |
The 11 Pseudomonas strains show clustering with both P . fluorescens and P . antarctica . E . coli K12 MG1655 was used as the outgroup organism. The tree was constructed using MEGA X software based on the Kimura 2-parameter model with 1000 bootstrap replications, and the scale bar corresponds to the average number of nucleotide substitutions per site. Accession numbers are given in parenthesis. |
format |
Still Image |
author |
Srijana Mukhia (9025058) Anil Kumar (105720) Poonam Kumari (6175139) Rakshak Kumar (125841) Sanjay Kumar (8853) |
author_facet |
Srijana Mukhia (9025058) Anil Kumar (105720) Poonam Kumari (6175139) Rakshak Kumar (125841) Sanjay Kumar (8853) |
author_sort |
Srijana Mukhia (9025058) |
title |
Maximum likelihood tree based on the partial 16S rRNA gene sequences of the 11 Pseudomonas strains and closely related validly published strains of the Pseudomonas genus obtained from NCBI database. |
title_short |
Maximum likelihood tree based on the partial 16S rRNA gene sequences of the 11 Pseudomonas strains and closely related validly published strains of the Pseudomonas genus obtained from NCBI database. |
title_full |
Maximum likelihood tree based on the partial 16S rRNA gene sequences of the 11 Pseudomonas strains and closely related validly published strains of the Pseudomonas genus obtained from NCBI database. |
title_fullStr |
Maximum likelihood tree based on the partial 16S rRNA gene sequences of the 11 Pseudomonas strains and closely related validly published strains of the Pseudomonas genus obtained from NCBI database. |
title_full_unstemmed |
Maximum likelihood tree based on the partial 16S rRNA gene sequences of the 11 Pseudomonas strains and closely related validly published strains of the Pseudomonas genus obtained from NCBI database. |
title_sort |
maximum likelihood tree based on the partial 16s rrna gene sequences of the 11 pseudomonas strains and closely related validly published strains of the pseudomonas genus obtained from ncbi database. |
publishDate |
2022 |
url |
https://doi.org/10.1371/journal.pone.0261178.g002 |
genre |
Antarc* Antarctica |
genre_facet |
Antarc* Antarctica |
op_relation |
https://figshare.com/articles/figure/Maximum_likelihood_tree_based_on_the_partial_16S_rRNA_gene_sequences_of_the_11_i_Pseudomonas_i_strains_and_closely_related_validly_published_strains_of_the_i_Pseudomonas_i_genus_obtained_from_NCBI_database_/19021497 doi:10.1371/journal.pone.0261178.g002 |
op_rights |
CC BY 4.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1371/journal.pone.0261178.g002 |
_version_ |
1766276015610396672 |