The location and counts of the sex-determining gene, sdY , in pink salmon.
A) A genome-wide association analysis with sex as the phenotype under investigation shown as a Manhattan plot. The putative sex-determining region is indicated with an arrow. B) A scatterplot with the average coverage of the variants across the genome on the x-axis for all the pink salmon, and the e...
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2021
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Online Access: | https://doi.org/10.1371/journal.pone.0255752.g007 |
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ftsmithonian:oai:figshare.com:article/17266012 |
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ftsmithonian:oai:figshare.com:article/17266012 2023-05-15T17:52:51+02:00 The location and counts of the sex-determining gene, sdY , in pink salmon. Kris A. Christensen (3797896) Eric B. Rondeau (8726934) Dionne Sakhrani (809148) Carlo A. Biagi (9579561) Hollie Johnson (11851615) Jay Joshi (8283645) Anne-Marie Flores (9579564) Sreeja Leelakumari (11851618) Richard Moore (2297) Pawan K. Pandoh (11851621) Ruth E. Withler (7852571) Terry D. Beacham (2855522) Rosalind A. Leggatt (11851624) Carolyn M. Tarpey (11851627) Lisa W. Seeb (8135907) James E. Seeb (8135904) Steven J. M. Jones (9709382) Robert H. Devlin (7852568) Ben F. Koop (316166) 2021-12-17T18:44:57Z https://doi.org/10.1371/journal.pone.0255752.g007 unknown https://figshare.com/articles/figure/The_location_and_counts_of_the_sex-determining_gene_i_sdY_i_in_pink_salmon_/17266012 doi:10.1371/journal.pone.0255752.g007 CC BY 4.0 CC-BY Microbiology Genetics Evolutionary Biology Ecology Inorganic Chemistry Science Policy Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified western pacific ocean six canadian rivers one japanese river oncorhynchus gorbuscha </ reference genome assemblies year life history salmon fishery worldwide largest fst peak year genome near pink salmon (< year temporal isolation div >< p could influence speciation fst peaks may pink salmon genome pink salmon whole genome genome influenced identified peaks genetic isolation spawn either sequencing data reduced recombination pairs long organ development multiple centromeres mostly associated large proportion immune function genomic consequences genetic drift genes related commercial value >) adults Image Figure 2021 ftsmithonian https://doi.org/10.1371/journal.pone.0255752.g007 2021-12-19T19:12:41Z A) A genome-wide association analysis with sex as the phenotype under investigation shown as a Manhattan plot. The putative sex-determining region is indicated with an arrow. B) A scatterplot with the average coverage of the variants across the genome on the x-axis for all the pink salmon, and the estimated sdY count on the y-axis ( sdY has previously been identified as the sex-determining gene in most salmonids). The different colour points represent different year-classes and sdY haplotypes. Still Image Oncorhynchus gorbuscha Pink salmon Unknown Pacific The ''Y'' ENVELOPE(-112.453,-112.453,57.591,57.591) |
institution |
Open Polar |
collection |
Unknown |
op_collection_id |
ftsmithonian |
language |
unknown |
topic |
Microbiology Genetics Evolutionary Biology Ecology Inorganic Chemistry Science Policy Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified western pacific ocean six canadian rivers one japanese river oncorhynchus gorbuscha </ reference genome assemblies year life history salmon fishery worldwide largest fst peak year genome near pink salmon (< year temporal isolation div >< p could influence speciation fst peaks may pink salmon genome pink salmon whole genome genome influenced identified peaks genetic isolation spawn either sequencing data reduced recombination pairs long organ development multiple centromeres mostly associated large proportion immune function genomic consequences genetic drift genes related commercial value >) adults |
spellingShingle |
Microbiology Genetics Evolutionary Biology Ecology Inorganic Chemistry Science Policy Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified western pacific ocean six canadian rivers one japanese river oncorhynchus gorbuscha </ reference genome assemblies year life history salmon fishery worldwide largest fst peak year genome near pink salmon (< year temporal isolation div >< p could influence speciation fst peaks may pink salmon genome pink salmon whole genome genome influenced identified peaks genetic isolation spawn either sequencing data reduced recombination pairs long organ development multiple centromeres mostly associated large proportion immune function genomic consequences genetic drift genes related commercial value >) adults Kris A. Christensen (3797896) Eric B. Rondeau (8726934) Dionne Sakhrani (809148) Carlo A. Biagi (9579561) Hollie Johnson (11851615) Jay Joshi (8283645) Anne-Marie Flores (9579564) Sreeja Leelakumari (11851618) Richard Moore (2297) Pawan K. Pandoh (11851621) Ruth E. Withler (7852571) Terry D. Beacham (2855522) Rosalind A. Leggatt (11851624) Carolyn M. Tarpey (11851627) Lisa W. Seeb (8135907) James E. Seeb (8135904) Steven J. M. Jones (9709382) Robert H. Devlin (7852568) Ben F. Koop (316166) The location and counts of the sex-determining gene, sdY , in pink salmon. |
topic_facet |
Microbiology Genetics Evolutionary Biology Ecology Inorganic Chemistry Science Policy Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified western pacific ocean six canadian rivers one japanese river oncorhynchus gorbuscha </ reference genome assemblies year life history salmon fishery worldwide largest fst peak year genome near pink salmon (< year temporal isolation div >< p could influence speciation fst peaks may pink salmon genome pink salmon whole genome genome influenced identified peaks genetic isolation spawn either sequencing data reduced recombination pairs long organ development multiple centromeres mostly associated large proportion immune function genomic consequences genetic drift genes related commercial value >) adults |
description |
A) A genome-wide association analysis with sex as the phenotype under investigation shown as a Manhattan plot. The putative sex-determining region is indicated with an arrow. B) A scatterplot with the average coverage of the variants across the genome on the x-axis for all the pink salmon, and the estimated sdY count on the y-axis ( sdY has previously been identified as the sex-determining gene in most salmonids). The different colour points represent different year-classes and sdY haplotypes. |
format |
Still Image |
author |
Kris A. Christensen (3797896) Eric B. Rondeau (8726934) Dionne Sakhrani (809148) Carlo A. Biagi (9579561) Hollie Johnson (11851615) Jay Joshi (8283645) Anne-Marie Flores (9579564) Sreeja Leelakumari (11851618) Richard Moore (2297) Pawan K. Pandoh (11851621) Ruth E. Withler (7852571) Terry D. Beacham (2855522) Rosalind A. Leggatt (11851624) Carolyn M. Tarpey (11851627) Lisa W. Seeb (8135907) James E. Seeb (8135904) Steven J. M. Jones (9709382) Robert H. Devlin (7852568) Ben F. Koop (316166) |
author_facet |
Kris A. Christensen (3797896) Eric B. Rondeau (8726934) Dionne Sakhrani (809148) Carlo A. Biagi (9579561) Hollie Johnson (11851615) Jay Joshi (8283645) Anne-Marie Flores (9579564) Sreeja Leelakumari (11851618) Richard Moore (2297) Pawan K. Pandoh (11851621) Ruth E. Withler (7852571) Terry D. Beacham (2855522) Rosalind A. Leggatt (11851624) Carolyn M. Tarpey (11851627) Lisa W. Seeb (8135907) James E. Seeb (8135904) Steven J. M. Jones (9709382) Robert H. Devlin (7852568) Ben F. Koop (316166) |
author_sort |
Kris A. Christensen (3797896) |
title |
The location and counts of the sex-determining gene, sdY , in pink salmon. |
title_short |
The location and counts of the sex-determining gene, sdY , in pink salmon. |
title_full |
The location and counts of the sex-determining gene, sdY , in pink salmon. |
title_fullStr |
The location and counts of the sex-determining gene, sdY , in pink salmon. |
title_full_unstemmed |
The location and counts of the sex-determining gene, sdY , in pink salmon. |
title_sort |
location and counts of the sex-determining gene, sdy , in pink salmon. |
publishDate |
2021 |
url |
https://doi.org/10.1371/journal.pone.0255752.g007 |
long_lat |
ENVELOPE(-112.453,-112.453,57.591,57.591) |
geographic |
Pacific The ''Y'' |
geographic_facet |
Pacific The ''Y'' |
genre |
Oncorhynchus gorbuscha Pink salmon |
genre_facet |
Oncorhynchus gorbuscha Pink salmon |
op_relation |
https://figshare.com/articles/figure/The_location_and_counts_of_the_sex-determining_gene_i_sdY_i_in_pink_salmon_/17266012 doi:10.1371/journal.pone.0255752.g007 |
op_rights |
CC BY 4.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1371/journal.pone.0255752.g007 |
_version_ |
1766160588417794048 |