Genome-wide divergence between odd and even-year pink salmon lineages.
A Manhattan plot of eigenGWAS results, with chromosome positions on the x-axis and p-values (corrected for genetic drift using the genomic inflation factor) on the y-axis to identify regions of the genome potentially under selection. The red horizontal line represents a Bonferroni correction at ɑ =...
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2021
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Online Access: | https://doi.org/10.1371/journal.pone.0255752.g005 |
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ftsmithonian:oai:figshare.com:article/17266006 |
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ftsmithonian:oai:figshare.com:article/17266006 2023-05-15T17:52:51+02:00 Genome-wide divergence between odd and even-year pink salmon lineages. Kris A. Christensen (3797896) Eric B. Rondeau (8726934) Dionne Sakhrani (809148) Carlo A. Biagi (9579561) Hollie Johnson (11851615) Jay Joshi (8283645) Anne-Marie Flores (9579564) Sreeja Leelakumari (11851618) Richard Moore (2297) Pawan K. Pandoh (11851621) Ruth E. Withler (7852571) Terry D. Beacham (2855522) Rosalind A. Leggatt (11851624) Carolyn M. Tarpey (11851627) Lisa W. Seeb (8135907) James E. Seeb (8135904) Steven J. M. Jones (9709382) Robert H. Devlin (7852568) Ben F. Koop (316166) 2021-12-17T18:44:57Z https://doi.org/10.1371/journal.pone.0255752.g005 unknown https://figshare.com/articles/figure/Genome-wide_divergence_between_odd_and_even-year_pink_salmon_lineages_/17266006 doi:10.1371/journal.pone.0255752.g005 CC BY 4.0 CC-BY Microbiology Genetics Evolutionary Biology Ecology Inorganic Chemistry Science Policy Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified western pacific ocean six canadian rivers one japanese river oncorhynchus gorbuscha </ reference genome assemblies year life history salmon fishery worldwide largest fst peak year genome near pink salmon (< year temporal isolation div >< p could influence speciation fst peaks may pink salmon genome pink salmon whole genome genome influenced identified peaks genetic isolation spawn either sequencing data reduced recombination pairs long organ development multiple centromeres mostly associated large proportion immune function genomic consequences genetic drift genes related commercial value >) adults Image Figure 2021 ftsmithonian https://doi.org/10.1371/journal.pone.0255752.g005 2021-12-19T19:12:42Z A Manhattan plot of eigenGWAS results, with chromosome positions on the x-axis and p-values (corrected for genetic drift using the genomic inflation factor) on the y-axis to identify regions of the genome potentially under selection. The red horizontal line represents a Bonferroni correction at ɑ = 0.01 and the blue line at ɑ = 0.05. All positions are from the odd-year genome assembly. Still Image Oncorhynchus gorbuscha Pink salmon Unknown Pacific The ''Y'' ENVELOPE(-112.453,-112.453,57.591,57.591) |
institution |
Open Polar |
collection |
Unknown |
op_collection_id |
ftsmithonian |
language |
unknown |
topic |
Microbiology Genetics Evolutionary Biology Ecology Inorganic Chemistry Science Policy Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified western pacific ocean six canadian rivers one japanese river oncorhynchus gorbuscha </ reference genome assemblies year life history salmon fishery worldwide largest fst peak year genome near pink salmon (< year temporal isolation div >< p could influence speciation fst peaks may pink salmon genome pink salmon whole genome genome influenced identified peaks genetic isolation spawn either sequencing data reduced recombination pairs long organ development multiple centromeres mostly associated large proportion immune function genomic consequences genetic drift genes related commercial value >) adults |
spellingShingle |
Microbiology Genetics Evolutionary Biology Ecology Inorganic Chemistry Science Policy Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified western pacific ocean six canadian rivers one japanese river oncorhynchus gorbuscha </ reference genome assemblies year life history salmon fishery worldwide largest fst peak year genome near pink salmon (< year temporal isolation div >< p could influence speciation fst peaks may pink salmon genome pink salmon whole genome genome influenced identified peaks genetic isolation spawn either sequencing data reduced recombination pairs long organ development multiple centromeres mostly associated large proportion immune function genomic consequences genetic drift genes related commercial value >) adults Kris A. Christensen (3797896) Eric B. Rondeau (8726934) Dionne Sakhrani (809148) Carlo A. Biagi (9579561) Hollie Johnson (11851615) Jay Joshi (8283645) Anne-Marie Flores (9579564) Sreeja Leelakumari (11851618) Richard Moore (2297) Pawan K. Pandoh (11851621) Ruth E. Withler (7852571) Terry D. Beacham (2855522) Rosalind A. Leggatt (11851624) Carolyn M. Tarpey (11851627) Lisa W. Seeb (8135907) James E. Seeb (8135904) Steven J. M. Jones (9709382) Robert H. Devlin (7852568) Ben F. Koop (316166) Genome-wide divergence between odd and even-year pink salmon lineages. |
topic_facet |
Microbiology Genetics Evolutionary Biology Ecology Inorganic Chemistry Science Policy Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified western pacific ocean six canadian rivers one japanese river oncorhynchus gorbuscha </ reference genome assemblies year life history salmon fishery worldwide largest fst peak year genome near pink salmon (< year temporal isolation div >< p could influence speciation fst peaks may pink salmon genome pink salmon whole genome genome influenced identified peaks genetic isolation spawn either sequencing data reduced recombination pairs long organ development multiple centromeres mostly associated large proportion immune function genomic consequences genetic drift genes related commercial value >) adults |
description |
A Manhattan plot of eigenGWAS results, with chromosome positions on the x-axis and p-values (corrected for genetic drift using the genomic inflation factor) on the y-axis to identify regions of the genome potentially under selection. The red horizontal line represents a Bonferroni correction at ɑ = 0.01 and the blue line at ɑ = 0.05. All positions are from the odd-year genome assembly. |
format |
Still Image |
author |
Kris A. Christensen (3797896) Eric B. Rondeau (8726934) Dionne Sakhrani (809148) Carlo A. Biagi (9579561) Hollie Johnson (11851615) Jay Joshi (8283645) Anne-Marie Flores (9579564) Sreeja Leelakumari (11851618) Richard Moore (2297) Pawan K. Pandoh (11851621) Ruth E. Withler (7852571) Terry D. Beacham (2855522) Rosalind A. Leggatt (11851624) Carolyn M. Tarpey (11851627) Lisa W. Seeb (8135907) James E. Seeb (8135904) Steven J. M. Jones (9709382) Robert H. Devlin (7852568) Ben F. Koop (316166) |
author_facet |
Kris A. Christensen (3797896) Eric B. Rondeau (8726934) Dionne Sakhrani (809148) Carlo A. Biagi (9579561) Hollie Johnson (11851615) Jay Joshi (8283645) Anne-Marie Flores (9579564) Sreeja Leelakumari (11851618) Richard Moore (2297) Pawan K. Pandoh (11851621) Ruth E. Withler (7852571) Terry D. Beacham (2855522) Rosalind A. Leggatt (11851624) Carolyn M. Tarpey (11851627) Lisa W. Seeb (8135907) James E. Seeb (8135904) Steven J. M. Jones (9709382) Robert H. Devlin (7852568) Ben F. Koop (316166) |
author_sort |
Kris A. Christensen (3797896) |
title |
Genome-wide divergence between odd and even-year pink salmon lineages. |
title_short |
Genome-wide divergence between odd and even-year pink salmon lineages. |
title_full |
Genome-wide divergence between odd and even-year pink salmon lineages. |
title_fullStr |
Genome-wide divergence between odd and even-year pink salmon lineages. |
title_full_unstemmed |
Genome-wide divergence between odd and even-year pink salmon lineages. |
title_sort |
genome-wide divergence between odd and even-year pink salmon lineages. |
publishDate |
2021 |
url |
https://doi.org/10.1371/journal.pone.0255752.g005 |
long_lat |
ENVELOPE(-112.453,-112.453,57.591,57.591) |
geographic |
Pacific The ''Y'' |
geographic_facet |
Pacific The ''Y'' |
genre |
Oncorhynchus gorbuscha Pink salmon |
genre_facet |
Oncorhynchus gorbuscha Pink salmon |
op_relation |
https://figshare.com/articles/figure/Genome-wide_divergence_between_odd_and_even-year_pink_salmon_lineages_/17266006 doi:10.1371/journal.pone.0255752.g005 |
op_rights |
CC BY 4.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1371/journal.pone.0255752.g005 |
_version_ |
1766160585813131264 |