Percent of shared alleles among pink salmon.

A heatmap of shared alleles between salmon is shown with clustering and a dendrogram. Each square represents the percent shared alleles after minor filtering of variants (bi-allelic SNPs). In addition to the legend displaying the colour representation of percent shared alleles, the sex, year-class,...

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Main Authors: Kris A. Christensen (3797896), Eric B. Rondeau (8726934), Dionne Sakhrani (809148), Carlo A. Biagi (9579561), Hollie Johnson (11851615), Jay Joshi (8283645), Anne-Marie Flores (9579564), Sreeja Leelakumari (11851618), Richard Moore (2297), Pawan K. Pandoh (11851621), Ruth E. Withler (7852571), Terry D. Beacham (2855522), Rosalind A. Leggatt (11851624), Carolyn M. Tarpey (11851627), Lisa W. Seeb (8135907), James E. Seeb (8135904), Steven J. M. Jones (9709382), Robert H. Devlin (7852568), Ben F. Koop (316166)
Format: Still Image
Language:unknown
Published: 2021
Subjects:
Online Access:https://doi.org/10.1371/journal.pone.0255752.g002
id ftsmithonian:oai:figshare.com:article/17265997
record_format openpolar
spelling ftsmithonian:oai:figshare.com:article/17265997 2023-05-15T17:52:51+02:00 Percent of shared alleles among pink salmon. Kris A. Christensen (3797896) Eric B. Rondeau (8726934) Dionne Sakhrani (809148) Carlo A. Biagi (9579561) Hollie Johnson (11851615) Jay Joshi (8283645) Anne-Marie Flores (9579564) Sreeja Leelakumari (11851618) Richard Moore (2297) Pawan K. Pandoh (11851621) Ruth E. Withler (7852571) Terry D. Beacham (2855522) Rosalind A. Leggatt (11851624) Carolyn M. Tarpey (11851627) Lisa W. Seeb (8135907) James E. Seeb (8135904) Steven J. M. Jones (9709382) Robert H. Devlin (7852568) Ben F. Koop (316166) 2021-12-17T18:44:57Z https://doi.org/10.1371/journal.pone.0255752.g002 unknown https://figshare.com/articles/figure/Percent_of_shared_alleles_among_pink_salmon_/17265997 doi:10.1371/journal.pone.0255752.g002 CC BY 4.0 CC-BY Microbiology Genetics Evolutionary Biology Ecology Inorganic Chemistry Science Policy Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified western pacific ocean six canadian rivers one japanese river oncorhynchus gorbuscha </ reference genome assemblies year life history salmon fishery worldwide largest fst peak year genome near pink salmon (< year temporal isolation div >< p could influence speciation fst peaks may pink salmon genome pink salmon whole genome genome influenced identified peaks genetic isolation spawn either sequencing data reduced recombination pairs long organ development multiple centromeres mostly associated large proportion immune function genomic consequences genetic drift genes related commercial value >) adults Image Figure 2021 ftsmithonian https://doi.org/10.1371/journal.pone.0255752.g002 2021-12-19T19:12:42Z A heatmap of shared alleles between salmon is shown with clustering and a dendrogram. Each square represents the percent shared alleles after minor filtering of variants (bi-allelic SNPs). In addition to the legend displaying the colour representation of percent shared alleles, the sex, year-class, and river system sample information is colour-coded and shown on both rows and columns. Still Image Oncorhynchus gorbuscha Pink salmon Unknown Pacific
institution Open Polar
collection Unknown
op_collection_id ftsmithonian
language unknown
topic Microbiology
Genetics
Evolutionary Biology
Ecology
Inorganic Chemistry
Science Policy
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
western pacific ocean
six canadian rivers
one japanese river
oncorhynchus gorbuscha </
reference genome assemblies
year life history
salmon fishery worldwide
largest fst peak
year genome near
pink salmon (<
year temporal isolation
div >< p
could influence speciation
fst peaks may
pink salmon genome
pink salmon
whole genome
genome influenced
identified peaks
genetic isolation
spawn either
sequencing data
reduced recombination
pairs long
organ development
multiple centromeres
mostly associated
large proportion
immune function
genomic consequences
genetic drift
genes related
commercial value
>) adults
spellingShingle Microbiology
Genetics
Evolutionary Biology
Ecology
Inorganic Chemistry
Science Policy
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
western pacific ocean
six canadian rivers
one japanese river
oncorhynchus gorbuscha </
reference genome assemblies
year life history
salmon fishery worldwide
largest fst peak
year genome near
pink salmon (<
year temporal isolation
div >< p
could influence speciation
fst peaks may
pink salmon genome
pink salmon
whole genome
genome influenced
identified peaks
genetic isolation
spawn either
sequencing data
reduced recombination
pairs long
organ development
multiple centromeres
mostly associated
large proportion
immune function
genomic consequences
genetic drift
genes related
commercial value
>) adults
Kris A. Christensen (3797896)
Eric B. Rondeau (8726934)
Dionne Sakhrani (809148)
Carlo A. Biagi (9579561)
Hollie Johnson (11851615)
Jay Joshi (8283645)
Anne-Marie Flores (9579564)
Sreeja Leelakumari (11851618)
Richard Moore (2297)
Pawan K. Pandoh (11851621)
Ruth E. Withler (7852571)
Terry D. Beacham (2855522)
Rosalind A. Leggatt (11851624)
Carolyn M. Tarpey (11851627)
Lisa W. Seeb (8135907)
James E. Seeb (8135904)
Steven J. M. Jones (9709382)
Robert H. Devlin (7852568)
Ben F. Koop (316166)
Percent of shared alleles among pink salmon.
topic_facet Microbiology
Genetics
Evolutionary Biology
Ecology
Inorganic Chemistry
Science Policy
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
western pacific ocean
six canadian rivers
one japanese river
oncorhynchus gorbuscha </
reference genome assemblies
year life history
salmon fishery worldwide
largest fst peak
year genome near
pink salmon (<
year temporal isolation
div >< p
could influence speciation
fst peaks may
pink salmon genome
pink salmon
whole genome
genome influenced
identified peaks
genetic isolation
spawn either
sequencing data
reduced recombination
pairs long
organ development
multiple centromeres
mostly associated
large proportion
immune function
genomic consequences
genetic drift
genes related
commercial value
>) adults
description A heatmap of shared alleles between salmon is shown with clustering and a dendrogram. Each square represents the percent shared alleles after minor filtering of variants (bi-allelic SNPs). In addition to the legend displaying the colour representation of percent shared alleles, the sex, year-class, and river system sample information is colour-coded and shown on both rows and columns.
format Still Image
author Kris A. Christensen (3797896)
Eric B. Rondeau (8726934)
Dionne Sakhrani (809148)
Carlo A. Biagi (9579561)
Hollie Johnson (11851615)
Jay Joshi (8283645)
Anne-Marie Flores (9579564)
Sreeja Leelakumari (11851618)
Richard Moore (2297)
Pawan K. Pandoh (11851621)
Ruth E. Withler (7852571)
Terry D. Beacham (2855522)
Rosalind A. Leggatt (11851624)
Carolyn M. Tarpey (11851627)
Lisa W. Seeb (8135907)
James E. Seeb (8135904)
Steven J. M. Jones (9709382)
Robert H. Devlin (7852568)
Ben F. Koop (316166)
author_facet Kris A. Christensen (3797896)
Eric B. Rondeau (8726934)
Dionne Sakhrani (809148)
Carlo A. Biagi (9579561)
Hollie Johnson (11851615)
Jay Joshi (8283645)
Anne-Marie Flores (9579564)
Sreeja Leelakumari (11851618)
Richard Moore (2297)
Pawan K. Pandoh (11851621)
Ruth E. Withler (7852571)
Terry D. Beacham (2855522)
Rosalind A. Leggatt (11851624)
Carolyn M. Tarpey (11851627)
Lisa W. Seeb (8135907)
James E. Seeb (8135904)
Steven J. M. Jones (9709382)
Robert H. Devlin (7852568)
Ben F. Koop (316166)
author_sort Kris A. Christensen (3797896)
title Percent of shared alleles among pink salmon.
title_short Percent of shared alleles among pink salmon.
title_full Percent of shared alleles among pink salmon.
title_fullStr Percent of shared alleles among pink salmon.
title_full_unstemmed Percent of shared alleles among pink salmon.
title_sort percent of shared alleles among pink salmon.
publishDate 2021
url https://doi.org/10.1371/journal.pone.0255752.g002
geographic Pacific
geographic_facet Pacific
genre Oncorhynchus gorbuscha
Pink salmon
genre_facet Oncorhynchus gorbuscha
Pink salmon
op_relation https://figshare.com/articles/figure/Percent_of_shared_alleles_among_pink_salmon_/17265997
doi:10.1371/journal.pone.0255752.g002
op_rights CC BY 4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1371/journal.pone.0255752.g002
_version_ 1766160579669524480