| Summary: | Depiction of LG15_El08.2–20.1 and a chromosomal polymorphism, either a deletion or evidence of a chromosomal fusion. A) LG15_El08.2–20.1 is depicted with the distance and location of the purposed polymorphism (in light translucent red). Scaffolds/contigs that comprise the region surrounding the polymorphism are shown below the chromosomal depiction, with a blue arrow showing where multiple small contigs were placed. B) Synteny with rainbow trout and Northern pike is shown based on CHROMEISTER [ 111 ] alignments. C) ONT/Nanopore reads that were used to generate the genome assemblies were aligned back to the odd-year genome and visualized with IGV. Reads in the odd-year individual are shown flanking the deletion (the display was split because the region was too large to adequately visualize continuously, ellipses mark the split). The proposed deletion is shown below the long reads. (TIF)
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