Comparison of the odd and even-year genome assemblies.
A chromosome-by-chromosome comparison of the odd and even-year genome assemblies. Each slide has two figures shown side-by-side with the odd-year scaffolds aligned to the corresponding odd-year chromosome on the left and the even-year scaffolds aligned to the corresponding odd-year chromosome. CHROM...
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2021
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Online Access: | https://doi.org/10.1371/journal.pone.0255752.s002 |
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ftsmithonian:oai:figshare.com:article/17265970 2023-05-15T17:52:51+02:00 Comparison of the odd and even-year genome assemblies. Kris A. Christensen (3797896) Eric B. Rondeau (8726934) Dionne Sakhrani (809148) Carlo A. Biagi (9579561) Hollie Johnson (11851615) Jay Joshi (8283645) Anne-Marie Flores (9579564) Sreeja Leelakumari (11851618) Richard Moore (2297) Pawan K. Pandoh (11851621) Ruth E. Withler (7852571) Terry D. Beacham (2855522) Rosalind A. Leggatt (11851624) Carolyn M. Tarpey (11851627) Lisa W. Seeb (8135907) James E. Seeb (8135904) Steven J. M. Jones (9709382) Robert H. Devlin (7852568) Ben F. Koop (316166) 2021-12-17T18:44:57Z https://doi.org/10.1371/journal.pone.0255752.s002 unknown https://figshare.com/articles/journal_contribution/Comparison_of_the_odd_and_even-year_genome_assemblies_/17265970 doi:10.1371/journal.pone.0255752.s002 CC BY 4.0 CC-BY Microbiology Genetics Evolutionary Biology Ecology Inorganic Chemistry Science Policy Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified western pacific ocean six canadian rivers one japanese river oncorhynchus gorbuscha </ reference genome assemblies year life history salmon fishery worldwide largest fst peak year genome near pink salmon (< year temporal isolation div >< p could influence speciation fst peaks may pink salmon genome pink salmon whole genome genome influenced identified peaks genetic isolation spawn either sequencing data reduced recombination pairs long organ development multiple centromeres mostly associated large proportion immune function genomic consequences genetic drift genes related commercial value >) adults Text Journal contribution 2021 ftsmithonian https://doi.org/10.1371/journal.pone.0255752.s002 2021-12-19T19:12:44Z A chromosome-by-chromosome comparison of the odd and even-year genome assemblies. Each slide has two figures shown side-by-side with the odd-year scaffolds aligned to the corresponding odd-year chromosome on the left and the even-year scaffolds aligned to the corresponding odd-year chromosome. CHROMEISTER [ 111 ] was used to align the scaffolds to the chromosomes. On the y-axes, the scaffold number (in descending order from the top) is shown, with dashed lines delineating the scaffold alignments. The chromosome position is shown on the x-axes. The y-axes are not equivalent between figures, but the x-axes are. (PDF) Other Non-Article Part of Journal/Newspaper Oncorhynchus gorbuscha Pink salmon Unknown Pacific The ''Y'' ENVELOPE(-112.453,-112.453,57.591,57.591) |
institution |
Open Polar |
collection |
Unknown |
op_collection_id |
ftsmithonian |
language |
unknown |
topic |
Microbiology Genetics Evolutionary Biology Ecology Inorganic Chemistry Science Policy Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified western pacific ocean six canadian rivers one japanese river oncorhynchus gorbuscha </ reference genome assemblies year life history salmon fishery worldwide largest fst peak year genome near pink salmon (< year temporal isolation div >< p could influence speciation fst peaks may pink salmon genome pink salmon whole genome genome influenced identified peaks genetic isolation spawn either sequencing data reduced recombination pairs long organ development multiple centromeres mostly associated large proportion immune function genomic consequences genetic drift genes related commercial value >) adults |
spellingShingle |
Microbiology Genetics Evolutionary Biology Ecology Inorganic Chemistry Science Policy Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified western pacific ocean six canadian rivers one japanese river oncorhynchus gorbuscha </ reference genome assemblies year life history salmon fishery worldwide largest fst peak year genome near pink salmon (< year temporal isolation div >< p could influence speciation fst peaks may pink salmon genome pink salmon whole genome genome influenced identified peaks genetic isolation spawn either sequencing data reduced recombination pairs long organ development multiple centromeres mostly associated large proportion immune function genomic consequences genetic drift genes related commercial value >) adults Kris A. Christensen (3797896) Eric B. Rondeau (8726934) Dionne Sakhrani (809148) Carlo A. Biagi (9579561) Hollie Johnson (11851615) Jay Joshi (8283645) Anne-Marie Flores (9579564) Sreeja Leelakumari (11851618) Richard Moore (2297) Pawan K. Pandoh (11851621) Ruth E. Withler (7852571) Terry D. Beacham (2855522) Rosalind A. Leggatt (11851624) Carolyn M. Tarpey (11851627) Lisa W. Seeb (8135907) James E. Seeb (8135904) Steven J. M. Jones (9709382) Robert H. Devlin (7852568) Ben F. Koop (316166) Comparison of the odd and even-year genome assemblies. |
topic_facet |
Microbiology Genetics Evolutionary Biology Ecology Inorganic Chemistry Science Policy Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified western pacific ocean six canadian rivers one japanese river oncorhynchus gorbuscha </ reference genome assemblies year life history salmon fishery worldwide largest fst peak year genome near pink salmon (< year temporal isolation div >< p could influence speciation fst peaks may pink salmon genome pink salmon whole genome genome influenced identified peaks genetic isolation spawn either sequencing data reduced recombination pairs long organ development multiple centromeres mostly associated large proportion immune function genomic consequences genetic drift genes related commercial value >) adults |
description |
A chromosome-by-chromosome comparison of the odd and even-year genome assemblies. Each slide has two figures shown side-by-side with the odd-year scaffolds aligned to the corresponding odd-year chromosome on the left and the even-year scaffolds aligned to the corresponding odd-year chromosome. CHROMEISTER [ 111 ] was used to align the scaffolds to the chromosomes. On the y-axes, the scaffold number (in descending order from the top) is shown, with dashed lines delineating the scaffold alignments. The chromosome position is shown on the x-axes. The y-axes are not equivalent between figures, but the x-axes are. (PDF) |
format |
Other Non-Article Part of Journal/Newspaper |
author |
Kris A. Christensen (3797896) Eric B. Rondeau (8726934) Dionne Sakhrani (809148) Carlo A. Biagi (9579561) Hollie Johnson (11851615) Jay Joshi (8283645) Anne-Marie Flores (9579564) Sreeja Leelakumari (11851618) Richard Moore (2297) Pawan K. Pandoh (11851621) Ruth E. Withler (7852571) Terry D. Beacham (2855522) Rosalind A. Leggatt (11851624) Carolyn M. Tarpey (11851627) Lisa W. Seeb (8135907) James E. Seeb (8135904) Steven J. M. Jones (9709382) Robert H. Devlin (7852568) Ben F. Koop (316166) |
author_facet |
Kris A. Christensen (3797896) Eric B. Rondeau (8726934) Dionne Sakhrani (809148) Carlo A. Biagi (9579561) Hollie Johnson (11851615) Jay Joshi (8283645) Anne-Marie Flores (9579564) Sreeja Leelakumari (11851618) Richard Moore (2297) Pawan K. Pandoh (11851621) Ruth E. Withler (7852571) Terry D. Beacham (2855522) Rosalind A. Leggatt (11851624) Carolyn M. Tarpey (11851627) Lisa W. Seeb (8135907) James E. Seeb (8135904) Steven J. M. Jones (9709382) Robert H. Devlin (7852568) Ben F. Koop (316166) |
author_sort |
Kris A. Christensen (3797896) |
title |
Comparison of the odd and even-year genome assemblies. |
title_short |
Comparison of the odd and even-year genome assemblies. |
title_full |
Comparison of the odd and even-year genome assemblies. |
title_fullStr |
Comparison of the odd and even-year genome assemblies. |
title_full_unstemmed |
Comparison of the odd and even-year genome assemblies. |
title_sort |
comparison of the odd and even-year genome assemblies. |
publishDate |
2021 |
url |
https://doi.org/10.1371/journal.pone.0255752.s002 |
long_lat |
ENVELOPE(-112.453,-112.453,57.591,57.591) |
geographic |
Pacific The ''Y'' |
geographic_facet |
Pacific The ''Y'' |
genre |
Oncorhynchus gorbuscha Pink salmon |
genre_facet |
Oncorhynchus gorbuscha Pink salmon |
op_relation |
https://figshare.com/articles/journal_contribution/Comparison_of_the_odd_and_even-year_genome_assemblies_/17265970 doi:10.1371/journal.pone.0255752.s002 |
op_rights |
CC BY 4.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1371/journal.pone.0255752.s002 |
_version_ |
1766160595201032192 |