Plastome sequence assembly results.

Total sizes of the Penstemon plastome, long single copy (LSC), short single copy (SSC), and inverted repeat (IR) for each species, as well as the counts of total genes, coding DNA sequence (CDS), rRNA, tRNA, and duplicated genes (within IR regions), followed by the NCBI sequence and annotation submi...

Full description

Bibliographic Details
Main Authors: Jason M. Stettler (5488874), Mikel R. Stevens (11841089), Lindsey M. Meservey (11841092), W. Wesley Crump (11841095), Jed D. Grow (11841098), Sydney J. Porter (11841101), L. Stephen Love (11841104), Peter J. Maughan (8887367), Eric N. Jellen (8887364)
Format: Dataset
Language:unknown
Published: 2021
Subjects:
Online Access:https://doi.org/10.1371/journal.pone.0261143.t003
id ftsmithonian:oai:figshare.com:article/17208716
record_format openpolar
spelling ftsmithonian:oai:figshare.com:article/17208716 2023-05-15T15:02:57+02:00 Plastome sequence assembly results. Jason M. Stettler (5488874) Mikel R. Stevens (11841089) Lindsey M. Meservey (11841092) W. Wesley Crump (11841095) Jed D. Grow (11841098) Sydney J. Porter (11841101) L. Stephen Love (11841104) Peter J. Maughan (8887367) Eric N. Jellen (8887364) 2021-12-15T18:37:53Z https://doi.org/10.1371/journal.pone.0261143.t003 unknown https://figshare.com/articles/dataset/Plastome_sequence_assembly_results_/17208716 doi:10.1371/journal.pone.0261143.t003 CC BY 4.0 CC-BY Genetics Evolutionary Biology Ecology Plant Biology Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified Chemical Sciences not elsewhere classified recent geologic origin provides greater accuracy old world taxa monophyletic clade sister higher nodal support div >< p analyzing phylogenetic relationships plastome based phylogeny complete plastome sequences resolving problematic clades improving phylogenetic resolution concatenated chloroplast sequences six subgenera occupying plastome based phylogenies concatenated sequences phylogenies based major clades improves resolution temperate grasslands scrophulariaceae </ rps2 </ rpoc2 </ rbcl </ rapid rate psba </ psaa </ pleistocene transition plastid genomes plantaginaceae </ perennial forbs penstemon </ ndhf </ matk </ lamiales using lamiales order arid deserts arctic tundra alpine meadows Dataset 2021 ftsmithonian https://doi.org/10.1371/journal.pone.0261143.t003 2021-12-19T19:25:08Z Total sizes of the Penstemon plastome, long single copy (LSC), short single copy (SSC), and inverted repeat (IR) for each species, as well as the counts of total genes, coding DNA sequence (CDS), rRNA, tRNA, and duplicated genes (within IR regions), followed by the NCBI sequence and annotation submission ID number. Dataset Arctic Tundra Unknown Arctic
institution Open Polar
collection Unknown
op_collection_id ftsmithonian
language unknown
topic Genetics
Evolutionary Biology
Ecology
Plant Biology
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Chemical Sciences not elsewhere classified
recent geologic origin
provides greater accuracy
old world taxa
monophyletic clade sister
higher nodal support
div >< p
analyzing phylogenetic relationships
plastome based phylogeny
complete plastome sequences
resolving problematic clades
improving phylogenetic resolution
concatenated chloroplast sequences
six subgenera occupying
plastome based phylogenies
concatenated sequences
phylogenies based
major clades
improves resolution
temperate grasslands
scrophulariaceae </
rps2 </
rpoc2 </
rbcl </
rapid rate
psba </
psaa </
pleistocene transition
plastid genomes
plantaginaceae </
perennial forbs
penstemon </
ndhf </
matk </
lamiales using
lamiales order
arid deserts
arctic tundra
alpine meadows
spellingShingle Genetics
Evolutionary Biology
Ecology
Plant Biology
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Chemical Sciences not elsewhere classified
recent geologic origin
provides greater accuracy
old world taxa
monophyletic clade sister
higher nodal support
div >< p
analyzing phylogenetic relationships
plastome based phylogeny
complete plastome sequences
resolving problematic clades
improving phylogenetic resolution
concatenated chloroplast sequences
six subgenera occupying
plastome based phylogenies
concatenated sequences
phylogenies based
major clades
improves resolution
temperate grasslands
scrophulariaceae </
rps2 </
rpoc2 </
rbcl </
rapid rate
psba </
psaa </
pleistocene transition
plastid genomes
plantaginaceae </
perennial forbs
penstemon </
ndhf </
matk </
lamiales using
lamiales order
arid deserts
arctic tundra
alpine meadows
Jason M. Stettler (5488874)
Mikel R. Stevens (11841089)
Lindsey M. Meservey (11841092)
W. Wesley Crump (11841095)
Jed D. Grow (11841098)
Sydney J. Porter (11841101)
L. Stephen Love (11841104)
Peter J. Maughan (8887367)
Eric N. Jellen (8887364)
Plastome sequence assembly results.
topic_facet Genetics
Evolutionary Biology
Ecology
Plant Biology
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
Chemical Sciences not elsewhere classified
recent geologic origin
provides greater accuracy
old world taxa
monophyletic clade sister
higher nodal support
div >< p
analyzing phylogenetic relationships
plastome based phylogeny
complete plastome sequences
resolving problematic clades
improving phylogenetic resolution
concatenated chloroplast sequences
six subgenera occupying
plastome based phylogenies
concatenated sequences
phylogenies based
major clades
improves resolution
temperate grasslands
scrophulariaceae </
rps2 </
rpoc2 </
rbcl </
rapid rate
psba </
psaa </
pleistocene transition
plastid genomes
plantaginaceae </
perennial forbs
penstemon </
ndhf </
matk </
lamiales using
lamiales order
arid deserts
arctic tundra
alpine meadows
description Total sizes of the Penstemon plastome, long single copy (LSC), short single copy (SSC), and inverted repeat (IR) for each species, as well as the counts of total genes, coding DNA sequence (CDS), rRNA, tRNA, and duplicated genes (within IR regions), followed by the NCBI sequence and annotation submission ID number.
format Dataset
author Jason M. Stettler (5488874)
Mikel R. Stevens (11841089)
Lindsey M. Meservey (11841092)
W. Wesley Crump (11841095)
Jed D. Grow (11841098)
Sydney J. Porter (11841101)
L. Stephen Love (11841104)
Peter J. Maughan (8887367)
Eric N. Jellen (8887364)
author_facet Jason M. Stettler (5488874)
Mikel R. Stevens (11841089)
Lindsey M. Meservey (11841092)
W. Wesley Crump (11841095)
Jed D. Grow (11841098)
Sydney J. Porter (11841101)
L. Stephen Love (11841104)
Peter J. Maughan (8887367)
Eric N. Jellen (8887364)
author_sort Jason M. Stettler (5488874)
title Plastome sequence assembly results.
title_short Plastome sequence assembly results.
title_full Plastome sequence assembly results.
title_fullStr Plastome sequence assembly results.
title_full_unstemmed Plastome sequence assembly results.
title_sort plastome sequence assembly results.
publishDate 2021
url https://doi.org/10.1371/journal.pone.0261143.t003
geographic Arctic
geographic_facet Arctic
genre Arctic
Tundra
genre_facet Arctic
Tundra
op_relation https://figshare.com/articles/dataset/Plastome_sequence_assembly_results_/17208716
doi:10.1371/journal.pone.0261143.t003
op_rights CC BY 4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1371/journal.pone.0261143.t003
_version_ 1766334868947468288