Plastome sequence assembly results.
Total sizes of the Penstemon plastome, long single copy (LSC), short single copy (SSC), and inverted repeat (IR) for each species, as well as the counts of total genes, coding DNA sequence (CDS), rRNA, tRNA, and duplicated genes (within IR regions), followed by the NCBI sequence and annotation submi...
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2021
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Online Access: | https://doi.org/10.1371/journal.pone.0261143.t003 |
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ftsmithonian:oai:figshare.com:article/17208716 |
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ftsmithonian:oai:figshare.com:article/17208716 2023-05-15T15:02:57+02:00 Plastome sequence assembly results. Jason M. Stettler (5488874) Mikel R. Stevens (11841089) Lindsey M. Meservey (11841092) W. Wesley Crump (11841095) Jed D. Grow (11841098) Sydney J. Porter (11841101) L. Stephen Love (11841104) Peter J. Maughan (8887367) Eric N. Jellen (8887364) 2021-12-15T18:37:53Z https://doi.org/10.1371/journal.pone.0261143.t003 unknown https://figshare.com/articles/dataset/Plastome_sequence_assembly_results_/17208716 doi:10.1371/journal.pone.0261143.t003 CC BY 4.0 CC-BY Genetics Evolutionary Biology Ecology Plant Biology Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified Chemical Sciences not elsewhere classified recent geologic origin provides greater accuracy old world taxa monophyletic clade sister higher nodal support div >< p analyzing phylogenetic relationships plastome based phylogeny complete plastome sequences resolving problematic clades improving phylogenetic resolution concatenated chloroplast sequences six subgenera occupying plastome based phylogenies concatenated sequences phylogenies based major clades improves resolution temperate grasslands scrophulariaceae </ rps2 </ rpoc2 </ rbcl </ rapid rate psba </ psaa </ pleistocene transition plastid genomes plantaginaceae </ perennial forbs penstemon </ ndhf </ matk </ lamiales using lamiales order arid deserts arctic tundra alpine meadows Dataset 2021 ftsmithonian https://doi.org/10.1371/journal.pone.0261143.t003 2021-12-19T19:25:08Z Total sizes of the Penstemon plastome, long single copy (LSC), short single copy (SSC), and inverted repeat (IR) for each species, as well as the counts of total genes, coding DNA sequence (CDS), rRNA, tRNA, and duplicated genes (within IR regions), followed by the NCBI sequence and annotation submission ID number. Dataset Arctic Tundra Unknown Arctic |
institution |
Open Polar |
collection |
Unknown |
op_collection_id |
ftsmithonian |
language |
unknown |
topic |
Genetics Evolutionary Biology Ecology Plant Biology Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified Chemical Sciences not elsewhere classified recent geologic origin provides greater accuracy old world taxa monophyletic clade sister higher nodal support div >< p analyzing phylogenetic relationships plastome based phylogeny complete plastome sequences resolving problematic clades improving phylogenetic resolution concatenated chloroplast sequences six subgenera occupying plastome based phylogenies concatenated sequences phylogenies based major clades improves resolution temperate grasslands scrophulariaceae </ rps2 </ rpoc2 </ rbcl </ rapid rate psba </ psaa </ pleistocene transition plastid genomes plantaginaceae </ perennial forbs penstemon </ ndhf </ matk </ lamiales using lamiales order arid deserts arctic tundra alpine meadows |
spellingShingle |
Genetics Evolutionary Biology Ecology Plant Biology Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified Chemical Sciences not elsewhere classified recent geologic origin provides greater accuracy old world taxa monophyletic clade sister higher nodal support div >< p analyzing phylogenetic relationships plastome based phylogeny complete plastome sequences resolving problematic clades improving phylogenetic resolution concatenated chloroplast sequences six subgenera occupying plastome based phylogenies concatenated sequences phylogenies based major clades improves resolution temperate grasslands scrophulariaceae </ rps2 </ rpoc2 </ rbcl </ rapid rate psba </ psaa </ pleistocene transition plastid genomes plantaginaceae </ perennial forbs penstemon </ ndhf </ matk </ lamiales using lamiales order arid deserts arctic tundra alpine meadows Jason M. Stettler (5488874) Mikel R. Stevens (11841089) Lindsey M. Meservey (11841092) W. Wesley Crump (11841095) Jed D. Grow (11841098) Sydney J. Porter (11841101) L. Stephen Love (11841104) Peter J. Maughan (8887367) Eric N. Jellen (8887364) Plastome sequence assembly results. |
topic_facet |
Genetics Evolutionary Biology Ecology Plant Biology Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified Chemical Sciences not elsewhere classified recent geologic origin provides greater accuracy old world taxa monophyletic clade sister higher nodal support div >< p analyzing phylogenetic relationships plastome based phylogeny complete plastome sequences resolving problematic clades improving phylogenetic resolution concatenated chloroplast sequences six subgenera occupying plastome based phylogenies concatenated sequences phylogenies based major clades improves resolution temperate grasslands scrophulariaceae </ rps2 </ rpoc2 </ rbcl </ rapid rate psba </ psaa </ pleistocene transition plastid genomes plantaginaceae </ perennial forbs penstemon </ ndhf </ matk </ lamiales using lamiales order arid deserts arctic tundra alpine meadows |
description |
Total sizes of the Penstemon plastome, long single copy (LSC), short single copy (SSC), and inverted repeat (IR) for each species, as well as the counts of total genes, coding DNA sequence (CDS), rRNA, tRNA, and duplicated genes (within IR regions), followed by the NCBI sequence and annotation submission ID number. |
format |
Dataset |
author |
Jason M. Stettler (5488874) Mikel R. Stevens (11841089) Lindsey M. Meservey (11841092) W. Wesley Crump (11841095) Jed D. Grow (11841098) Sydney J. Porter (11841101) L. Stephen Love (11841104) Peter J. Maughan (8887367) Eric N. Jellen (8887364) |
author_facet |
Jason M. Stettler (5488874) Mikel R. Stevens (11841089) Lindsey M. Meservey (11841092) W. Wesley Crump (11841095) Jed D. Grow (11841098) Sydney J. Porter (11841101) L. Stephen Love (11841104) Peter J. Maughan (8887367) Eric N. Jellen (8887364) |
author_sort |
Jason M. Stettler (5488874) |
title |
Plastome sequence assembly results. |
title_short |
Plastome sequence assembly results. |
title_full |
Plastome sequence assembly results. |
title_fullStr |
Plastome sequence assembly results. |
title_full_unstemmed |
Plastome sequence assembly results. |
title_sort |
plastome sequence assembly results. |
publishDate |
2021 |
url |
https://doi.org/10.1371/journal.pone.0261143.t003 |
geographic |
Arctic |
geographic_facet |
Arctic |
genre |
Arctic Tundra |
genre_facet |
Arctic Tundra |
op_relation |
https://figshare.com/articles/dataset/Plastome_sequence_assembly_results_/17208716 doi:10.1371/journal.pone.0261143.t003 |
op_rights |
CC BY 4.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1371/journal.pone.0261143.t003 |
_version_ |
1766334868947468288 |