Identified F ST outliers before and after disequilibrium pruning among arctic fox populations across North America.

Describes (per SNP): location, gene association, and predicted gene function in reference to the dog genome. The program identifying the SNP as an F ST outlier is also presented along with an indication of those missense SNP’s with the potential to alter protein function. All BLASTp predicted functi...

Full description

Bibliographic Details
Main Authors: Tristan M. Baecklund (10573715), Michael E. Donaldson (4431115), Karsten Hueffer (606200), Christopher J. Kyle (8136867)
Format: Dataset
Language:unknown
Published: 2021
Subjects:
Online Access:https://doi.org/10.1371/journal.pone.0258975.s014
id ftsmithonian:oai:figshare.com:article/16905594
record_format openpolar
spelling ftsmithonian:oai:figshare.com:article/16905594 2023-05-15T14:31:06+02:00 Identified F ST outliers before and after disequilibrium pruning among arctic fox populations across North America. Tristan M. Baecklund (10573715) Michael E. Donaldson (4431115) Karsten Hueffer (606200) Christopher J. Kyle (8136867) 2021-10-29T17:28:08Z https://doi.org/10.1371/journal.pone.0258975.s014 unknown https://figshare.com/articles/dataset/Identified_F_sub_ST_sub_outliers_before_and_after_disequilibrium_pruning_among_arctic_fox_populations_across_North_America_/16905594 doi:10.1371/journal.pone.0258975.s014 CC BY 4.0 CC-BY Genetics Evolutionary Biology Ecology Infectious Diseases Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified somewhat unexpected given rapidly changing environments north american range necessarily reflect causation corroborating past research undermine local adaptation local adaptation enhance contrasting genetic structure mediate host responses provide data relevant div >< p neutral genetic structure arctic rabies variants local adaptation genetic structure neutral loci primary host natural host host populations traits expected sequencing assay sampled regions remains unknown outliers associated northern climates lived nature largely persists increased frequencies geographic distributions foxes predominated evolutionary relationships dispersal capacities direct link differential selection data contribute assessed correlations arctic rabies arctic fox advantageous genotypes Dataset 2021 ftsmithonian https://doi.org/10.1371/journal.pone.0258975.s014 2021-12-19T23:01:20Z Describes (per SNP): location, gene association, and predicted gene function in reference to the dog genome. The program identifying the SNP as an F ST outlier is also presented along with an indication of those missense SNP’s with the potential to alter protein function. All BLASTp predicted functions are based upon Canis lupus familiaris unless otherwise specified. (XLSX) Dataset Arctic Fox Arctic Canis lupus Unknown Arctic
institution Open Polar
collection Unknown
op_collection_id ftsmithonian
language unknown
topic Genetics
Evolutionary Biology
Ecology
Infectious Diseases
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
somewhat unexpected given
rapidly changing environments
north american range
necessarily reflect causation
corroborating past research
undermine local adaptation
local adaptation enhance
contrasting genetic structure
mediate host responses
provide data relevant
div >< p
neutral genetic structure
arctic rabies variants
local adaptation
genetic structure
neutral loci
primary host
natural host
host populations
traits expected
sequencing assay
sampled regions
remains unknown
outliers associated
northern climates
lived nature
largely persists
increased frequencies
geographic distributions
foxes predominated
evolutionary relationships
dispersal capacities
direct link
differential selection
data contribute
assessed correlations
arctic rabies
arctic fox
advantageous genotypes
spellingShingle Genetics
Evolutionary Biology
Ecology
Infectious Diseases
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
somewhat unexpected given
rapidly changing environments
north american range
necessarily reflect causation
corroborating past research
undermine local adaptation
local adaptation enhance
contrasting genetic structure
mediate host responses
provide data relevant
div >< p
neutral genetic structure
arctic rabies variants
local adaptation
genetic structure
neutral loci
primary host
natural host
host populations
traits expected
sequencing assay
sampled regions
remains unknown
outliers associated
northern climates
lived nature
largely persists
increased frequencies
geographic distributions
foxes predominated
evolutionary relationships
dispersal capacities
direct link
differential selection
data contribute
assessed correlations
arctic rabies
arctic fox
advantageous genotypes
Tristan M. Baecklund (10573715)
Michael E. Donaldson (4431115)
Karsten Hueffer (606200)
Christopher J. Kyle (8136867)
Identified F ST outliers before and after disequilibrium pruning among arctic fox populations across North America.
topic_facet Genetics
Evolutionary Biology
Ecology
Infectious Diseases
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
somewhat unexpected given
rapidly changing environments
north american range
necessarily reflect causation
corroborating past research
undermine local adaptation
local adaptation enhance
contrasting genetic structure
mediate host responses
provide data relevant
div >< p
neutral genetic structure
arctic rabies variants
local adaptation
genetic structure
neutral loci
primary host
natural host
host populations
traits expected
sequencing assay
sampled regions
remains unknown
outliers associated
northern climates
lived nature
largely persists
increased frequencies
geographic distributions
foxes predominated
evolutionary relationships
dispersal capacities
direct link
differential selection
data contribute
assessed correlations
arctic rabies
arctic fox
advantageous genotypes
description Describes (per SNP): location, gene association, and predicted gene function in reference to the dog genome. The program identifying the SNP as an F ST outlier is also presented along with an indication of those missense SNP’s with the potential to alter protein function. All BLASTp predicted functions are based upon Canis lupus familiaris unless otherwise specified. (XLSX)
format Dataset
author Tristan M. Baecklund (10573715)
Michael E. Donaldson (4431115)
Karsten Hueffer (606200)
Christopher J. Kyle (8136867)
author_facet Tristan M. Baecklund (10573715)
Michael E. Donaldson (4431115)
Karsten Hueffer (606200)
Christopher J. Kyle (8136867)
author_sort Tristan M. Baecklund (10573715)
title Identified F ST outliers before and after disequilibrium pruning among arctic fox populations across North America.
title_short Identified F ST outliers before and after disequilibrium pruning among arctic fox populations across North America.
title_full Identified F ST outliers before and after disequilibrium pruning among arctic fox populations across North America.
title_fullStr Identified F ST outliers before and after disequilibrium pruning among arctic fox populations across North America.
title_full_unstemmed Identified F ST outliers before and after disequilibrium pruning among arctic fox populations across North America.
title_sort identified f st outliers before and after disequilibrium pruning among arctic fox populations across north america.
publishDate 2021
url https://doi.org/10.1371/journal.pone.0258975.s014
geographic Arctic
geographic_facet Arctic
genre Arctic Fox
Arctic
Canis lupus
genre_facet Arctic Fox
Arctic
Canis lupus
op_relation https://figshare.com/articles/dataset/Identified_F_sub_ST_sub_outliers_before_and_after_disequilibrium_pruning_among_arctic_fox_populations_across_North_America_/16905594
doi:10.1371/journal.pone.0258975.s014
op_rights CC BY 4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1371/journal.pone.0258975.s014
_version_ 1766304817944199168