DAPC of final on-target SNP sub-dataset identifies two clusters.

Discriminant analysis of principal components on the final on-target SNP sub-dataset (n = 22). a) the clustering of the samples into two inferred clusters and b) the clustering of samples into the same two inferred clusters as in a), but individuals are identified based on the geographic region from...

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Main Authors: Tristan M. Baecklund (10573715), Michael E. Donaldson (4431115), Karsten Hueffer (606200), Christopher J. Kyle (8136867)
Format: Still Image
Language:unknown
Published: 2021
Subjects:
Online Access:https://doi.org/10.1371/journal.pone.0258975.s004
id ftsmithonian:oai:figshare.com:article/16905564
record_format openpolar
spelling ftsmithonian:oai:figshare.com:article/16905564 2023-05-15T14:31:10+02:00 DAPC of final on-target SNP sub-dataset identifies two clusters. Tristan M. Baecklund (10573715) Michael E. Donaldson (4431115) Karsten Hueffer (606200) Christopher J. Kyle (8136867) 2021-10-29T17:28:08Z https://doi.org/10.1371/journal.pone.0258975.s004 unknown https://figshare.com/articles/figure/DAPC_of_final_on-target_SNP_sub-dataset_identifies_two_clusters_/16905564 doi:10.1371/journal.pone.0258975.s004 CC BY 4.0 CC-BY Genetics Evolutionary Biology Ecology Infectious Diseases Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified somewhat unexpected given rapidly changing environments north american range necessarily reflect causation corroborating past research undermine local adaptation local adaptation enhance contrasting genetic structure mediate host responses provide data relevant div >< p neutral genetic structure arctic rabies variants local adaptation genetic structure neutral loci primary host natural host host populations traits expected sequencing assay sampled regions remains unknown outliers associated northern climates lived nature largely persists increased frequencies geographic distributions foxes predominated evolutionary relationships dispersal capacities direct link differential selection data contribute assessed correlations arctic rabies arctic fox advantageous genotypes Image Figure 2021 ftsmithonian https://doi.org/10.1371/journal.pone.0258975.s004 2021-12-19T23:01:23Z Discriminant analysis of principal components on the final on-target SNP sub-dataset (n = 22). a) the clustering of the samples into two inferred clusters and b) the clustering of samples into the same two inferred clusters as in a), but individuals are identified based on the geographic region from which the sample originated; cluster 1 = Arviat and Victoria Island samples; cluster 2 = Southwestern Alaska samples. (TIF) Still Image Arctic Fox Arctic Arviat Victoria Island Alaska Unknown Arctic
institution Open Polar
collection Unknown
op_collection_id ftsmithonian
language unknown
topic Genetics
Evolutionary Biology
Ecology
Infectious Diseases
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
somewhat unexpected given
rapidly changing environments
north american range
necessarily reflect causation
corroborating past research
undermine local adaptation
local adaptation enhance
contrasting genetic structure
mediate host responses
provide data relevant
div >< p
neutral genetic structure
arctic rabies variants
local adaptation
genetic structure
neutral loci
primary host
natural host
host populations
traits expected
sequencing assay
sampled regions
remains unknown
outliers associated
northern climates
lived nature
largely persists
increased frequencies
geographic distributions
foxes predominated
evolutionary relationships
dispersal capacities
direct link
differential selection
data contribute
assessed correlations
arctic rabies
arctic fox
advantageous genotypes
spellingShingle Genetics
Evolutionary Biology
Ecology
Infectious Diseases
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
somewhat unexpected given
rapidly changing environments
north american range
necessarily reflect causation
corroborating past research
undermine local adaptation
local adaptation enhance
contrasting genetic structure
mediate host responses
provide data relevant
div >< p
neutral genetic structure
arctic rabies variants
local adaptation
genetic structure
neutral loci
primary host
natural host
host populations
traits expected
sequencing assay
sampled regions
remains unknown
outliers associated
northern climates
lived nature
largely persists
increased frequencies
geographic distributions
foxes predominated
evolutionary relationships
dispersal capacities
direct link
differential selection
data contribute
assessed correlations
arctic rabies
arctic fox
advantageous genotypes
Tristan M. Baecklund (10573715)
Michael E. Donaldson (4431115)
Karsten Hueffer (606200)
Christopher J. Kyle (8136867)
DAPC of final on-target SNP sub-dataset identifies two clusters.
topic_facet Genetics
Evolutionary Biology
Ecology
Infectious Diseases
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
somewhat unexpected given
rapidly changing environments
north american range
necessarily reflect causation
corroborating past research
undermine local adaptation
local adaptation enhance
contrasting genetic structure
mediate host responses
provide data relevant
div >< p
neutral genetic structure
arctic rabies variants
local adaptation
genetic structure
neutral loci
primary host
natural host
host populations
traits expected
sequencing assay
sampled regions
remains unknown
outliers associated
northern climates
lived nature
largely persists
increased frequencies
geographic distributions
foxes predominated
evolutionary relationships
dispersal capacities
direct link
differential selection
data contribute
assessed correlations
arctic rabies
arctic fox
advantageous genotypes
description Discriminant analysis of principal components on the final on-target SNP sub-dataset (n = 22). a) the clustering of the samples into two inferred clusters and b) the clustering of samples into the same two inferred clusters as in a), but individuals are identified based on the geographic region from which the sample originated; cluster 1 = Arviat and Victoria Island samples; cluster 2 = Southwestern Alaska samples. (TIF)
format Still Image
author Tristan M. Baecklund (10573715)
Michael E. Donaldson (4431115)
Karsten Hueffer (606200)
Christopher J. Kyle (8136867)
author_facet Tristan M. Baecklund (10573715)
Michael E. Donaldson (4431115)
Karsten Hueffer (606200)
Christopher J. Kyle (8136867)
author_sort Tristan M. Baecklund (10573715)
title DAPC of final on-target SNP sub-dataset identifies two clusters.
title_short DAPC of final on-target SNP sub-dataset identifies two clusters.
title_full DAPC of final on-target SNP sub-dataset identifies two clusters.
title_fullStr DAPC of final on-target SNP sub-dataset identifies two clusters.
title_full_unstemmed DAPC of final on-target SNP sub-dataset identifies two clusters.
title_sort dapc of final on-target snp sub-dataset identifies two clusters.
publishDate 2021
url https://doi.org/10.1371/journal.pone.0258975.s004
geographic Arctic
geographic_facet Arctic
genre Arctic Fox
Arctic
Arviat
Victoria Island
Alaska
genre_facet Arctic Fox
Arctic
Arviat
Victoria Island
Alaska
op_relation https://figshare.com/articles/figure/DAPC_of_final_on-target_SNP_sub-dataset_identifies_two_clusters_/16905564
doi:10.1371/journal.pone.0258975.s004
op_rights CC BY 4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1371/journal.pone.0258975.s004
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