Number and origin of publicly available SARS-CoV-2 sequence data over time.

• Main Authors: Barbara Schrörs (9156839), Pablo Riesgo-Ferreiro (10909735), Patrick Sorn (3548396), Ranganath Gudimella (741797), Thomas Bukur (3548387), Thomas Rösler (11485781), Martin Löwer (133159), Ugur Sahin (133198)
• Format: Still Image
• Language: unknown
• Published: 2021
• Subjects: Biophysics; Biochemistry; Microbiology; Genetics; Molecular Biology; Evolutionary Biology; Cancer; Infectious Diseases; Virology; Biological Sciences not elsewhere classified; xlink "> due; induce immune responses; european nucleotide archive; ngs data sets; mutant genome assemblies; 806 ngs datasets; might indicate co; type spike protein; spike protein mutants; mutant spike protein; confidence subclonal variants; 472 distinct variants; glycoprotein mutants demonstrates; diverse human populations; 2 genome assemblies; 14 recurrent variants; spike protein; variants might; ngs samples; 2 genome; 2 spike; observed variants; scale analysis; samples contained; require adaptations; mutation rate; median number; least 1; host evolution; great interest; findings demonstrate; early detection; continuous screening; continuous importance; cell recognition; around 2; antibody binding; analyzed sequences; analyzed 1; 2 strains; 2 sequences; 19 pandemic; Argentina; Canada; Faroe Islands; New Zealand; Norway; Saba; Saint-Vincent; Trinidad; Uruguay; Iceland
• Online Access: https://doi.org/10.1371/journal.pone.0249254.s001

The histogram shows the number of SARS-CoV-2 assembly sequences deposited at GISAID and NGS data deposited at SRA. Color coding indicates the sample origin. Countries summarized as “other” include: Afghanistan, Albania, Algeria, Andorra, Angola, Antigua and Barbuda, Argentina, Armenia, Aruba, Australia, Austria, Azerbaijan, Bahamas, Bahrain, Bangladesh, Barbados, Belarus, Belgium, Belize, Benin, Bermuda, Bolivia, Plurinational State of, Bonaire, Sint Eustatius and Saba, Bosnia and Herzegovina, Botswana, Brunei Darussalam, Bulgaria, Burkina Faso, Cambodia, Cameroon, Canada, Cayman Islands, Chile, Colombia, Comoros, Congo, Costa Rica, Croatia, Cuba, Cyprus, Czechia, Dominican Republic, Ecuador, Egypt, El Salvador, Equatorial Guinea, Estonia, Eswatini, Ethiopia, Faroe Islands, Finland, French Guiana, French Polynesia, Gabon, Gambia, Georgia, Ghana, Gibraltar, Guam, Guatemala, Guinea, Hong Kong, Hungary, Iceland, Indonesia, Iran, Islamic Republic of, Iraq, Ireland, Israel, Italy, Jamaica, Japan, Jordan, Kazakhstan, Kenya, Kuwait, Latvia, Lebanon, Lesotho, Liechtenstein, Lithuania, Luxembourg, Madagascar, Malawi, Malaysia, Mali, Malta, Martinique, Mauritius, Mexico, Moldova, Republic of, Monaco, Mongolia, Montenegro, Morocco, Mozambique, Myanmar, Nepal, Netherlands, New Zealand, Nigeria, North Macedonia, Northern Mariana Islands, Norway, Oman, Pakistan, Palestine, State of, Panama, Papua New Guinea, Paraguay, Peru, Philippines, Portugal, Reunion, Romania, Russian Federation, Rwanda, Saint Barthelemy, Saint Kitts and Nevis, Saint Lucia, Saint Martin (French part), Saint Vincent and the Grenadines, Saudi Arabia, Senegal, Serbia, Sierra Leone, Singapore, Slovakia, Slovenia, South Africa, Sri Lanka, Suriname, Sweden, Switzerland, Taiwan, Province of China, Thailand, Togo, Trinidad and Tobago, Tunisia, Uganda, Ukraine, United Arab Emirates, unknown, Uruguay, Uzbekistan, Venezuela, Bolivarian Republic of, Vietnam, Virgin Islands, British, Zambia, Zimbabwe and unknown. (TIF)