Additional file 12 of SalmoSim: the development of a three-compartment in vitro simulator of the Atlantic salmon GI tract and associated microbial communities

• Main Authors: Raminta Kazlauskaite (11368785), Bachar Cheaib (718391), Chloe Heys (3267108), Umer Zeeshan Ijaz (3769318), Stephanie Connelly (8926943), William Sloan (523554), Julie Russel (11368788), Laura Rubio (2662996), John Sweetman (739905), Alex Kitts (11368791), Philip McGinnity (3250896), Philip Lyons (11368794), Martin Llewellyn (6532214)
• Format: Other Non-Article Part of Journal/Newspaper
• Language: unknown
• Published: 2021
• Subjects: Microbiology; Genetics; SalmoSim; Gut microbiota; In vitro gut model system; Atlantic salmon; NGS
• Online Access: https://doi.org/10.6084/m9.figshare.16551207.v1

Additional file 11: Figure S5. Stability within SalmoSim system, within different biological replicates and different gut compartments, calculated by using generalised UniFrac values for pairwise beta diversity analysis. The figure represents microbial stability within the SalmoSim system (data separated by different biological replicates and gut compartments) as the pairwise beta diversity comparison between different sampling time points (days), calculated by using generalised (50%) UniFrac as a distance measure. A small p-value indicates that the two time points are statistically different, and p>0.05 indicates that two time points are not statistically different. The colour key illustrates the p-value: red end of spectrum denoting low p values (distinct compositions between time points) and dark green indicating high p values (similar compositions between timepoints).