Genotypic structure of mussel samples from contact zones between M . edulis and M . trossulus .
A. Frequency distributions of individual q-values in pooled samples. Red and blue bars indicate T- and E-morphotypes, correspondingly. B. Distributions of individual q-values in samples ordinated by Ptros (proportion of M . trossulus ). Red and blue dots indicate T- and E-morphotypes, correspondingl...
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ftsmithonian:oai:figshare.com:article/15045758 2023-05-15T15:08:15+02:00 Genotypic structure of mussel samples from contact zones between M . edulis and M . trossulus . Vadim Khaitov (2589874) Julia Marchenko (11177903) Marina Katolikova (2589880) Risto Väinölä (2589886) Sarah E. Kingston (3608393) David B. Carlon (11177906) Michael Gantsevich (2589877) Petr Strelkov (2589883) 2021-07-23T17:34:32Z https://doi.org/10.1371/journal.pone.0249587.s002 unknown https://figshare.com/articles/figure/Genotypic_structure_of_mussel_samples_from_contact_zones_between_i_M_i_i_edulis_i_and_i_M_i_i_trossulus_i_/15045758 doi:10.1371/journal.pone.0249587.s002 CC BY 4.0 CC-BY Evolutionary Biology Ecology Inorganic Chemistry Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified morphotype trossulu White Sea semi-diagnostic conchological character Arctic Barents Sea species identification mussels Mytilus edulis L Baltic Sea unstudied contact zones Image Figure 2021 ftsmithonian https://doi.org/10.1371/journal.pone.0249587.s002 2021-07-25T16:24:04Z A. Frequency distributions of individual q-values in pooled samples. Red and blue bars indicate T- and E-morphotypes, correspondingly. B. Distributions of individual q-values in samples ordinated by Ptros (proportion of M . trossulus ). Red and blue dots indicate T- and E-morphotypes, correspondingly. To avoid overplotting, the horizontal position of all points (individual mussels) was jittered by adding a small random value. For visual purposes, chart areas with maximal dots density are contoured and the probability of T-morphotype presence is shown by the color gradient. The contour lines represent the kernel density estimations (Venables, Ripley 2002) with density2d() function in “ggplot2” package. The probability was assessed using the binomial general additive model, GAM (Zuur, 2012) with the binary outcome (T vs E morphotype) as dependent variable and “Structure q-score”, “ Ptros ” and “ Set ” as independent predictors. SCOT and NORW were not included in GAM due to poore cover of Ptros axis. References for S2 Fig : Venables, W. N. and Ripley, B. D. (2002) Modern Applied Statistics with S. Fourth edition. Springer. Zuur, A.F. (2012) A Beginner’s Guide to Generalized Additive Models with R. Highland Statistics Ltd, Newburgh. (TIF) Still Image Arctic Barents Sea White Sea Unknown Arctic Barents Sea White Sea Gam ENVELOPE(-57.955,-57.955,-61.923,-61.923) |
institution |
Open Polar |
collection |
Unknown |
op_collection_id |
ftsmithonian |
language |
unknown |
topic |
Evolutionary Biology Ecology Inorganic Chemistry Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified morphotype trossulu White Sea semi-diagnostic conchological character Arctic Barents Sea species identification mussels Mytilus edulis L Baltic Sea unstudied contact zones |
spellingShingle |
Evolutionary Biology Ecology Inorganic Chemistry Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified morphotype trossulu White Sea semi-diagnostic conchological character Arctic Barents Sea species identification mussels Mytilus edulis L Baltic Sea unstudied contact zones Vadim Khaitov (2589874) Julia Marchenko (11177903) Marina Katolikova (2589880) Risto Väinölä (2589886) Sarah E. Kingston (3608393) David B. Carlon (11177906) Michael Gantsevich (2589877) Petr Strelkov (2589883) Genotypic structure of mussel samples from contact zones between M . edulis and M . trossulus . |
topic_facet |
Evolutionary Biology Ecology Inorganic Chemistry Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified morphotype trossulu White Sea semi-diagnostic conchological character Arctic Barents Sea species identification mussels Mytilus edulis L Baltic Sea unstudied contact zones |
description |
A. Frequency distributions of individual q-values in pooled samples. Red and blue bars indicate T- and E-morphotypes, correspondingly. B. Distributions of individual q-values in samples ordinated by Ptros (proportion of M . trossulus ). Red and blue dots indicate T- and E-morphotypes, correspondingly. To avoid overplotting, the horizontal position of all points (individual mussels) was jittered by adding a small random value. For visual purposes, chart areas with maximal dots density are contoured and the probability of T-morphotype presence is shown by the color gradient. The contour lines represent the kernel density estimations (Venables, Ripley 2002) with density2d() function in “ggplot2” package. The probability was assessed using the binomial general additive model, GAM (Zuur, 2012) with the binary outcome (T vs E morphotype) as dependent variable and “Structure q-score”, “ Ptros ” and “ Set ” as independent predictors. SCOT and NORW were not included in GAM due to poore cover of Ptros axis. References for S2 Fig : Venables, W. N. and Ripley, B. D. (2002) Modern Applied Statistics with S. Fourth edition. Springer. Zuur, A.F. (2012) A Beginner’s Guide to Generalized Additive Models with R. Highland Statistics Ltd, Newburgh. (TIF) |
format |
Still Image |
author |
Vadim Khaitov (2589874) Julia Marchenko (11177903) Marina Katolikova (2589880) Risto Väinölä (2589886) Sarah E. Kingston (3608393) David B. Carlon (11177906) Michael Gantsevich (2589877) Petr Strelkov (2589883) |
author_facet |
Vadim Khaitov (2589874) Julia Marchenko (11177903) Marina Katolikova (2589880) Risto Väinölä (2589886) Sarah E. Kingston (3608393) David B. Carlon (11177906) Michael Gantsevich (2589877) Petr Strelkov (2589883) |
author_sort |
Vadim Khaitov (2589874) |
title |
Genotypic structure of mussel samples from contact zones between M . edulis and M . trossulus . |
title_short |
Genotypic structure of mussel samples from contact zones between M . edulis and M . trossulus . |
title_full |
Genotypic structure of mussel samples from contact zones between M . edulis and M . trossulus . |
title_fullStr |
Genotypic structure of mussel samples from contact zones between M . edulis and M . trossulus . |
title_full_unstemmed |
Genotypic structure of mussel samples from contact zones between M . edulis and M . trossulus . |
title_sort |
genotypic structure of mussel samples from contact zones between m . edulis and m . trossulus . |
publishDate |
2021 |
url |
https://doi.org/10.1371/journal.pone.0249587.s002 |
long_lat |
ENVELOPE(-57.955,-57.955,-61.923,-61.923) |
geographic |
Arctic Barents Sea White Sea Gam |
geographic_facet |
Arctic Barents Sea White Sea Gam |
genre |
Arctic Barents Sea White Sea |
genre_facet |
Arctic Barents Sea White Sea |
op_relation |
https://figshare.com/articles/figure/Genotypic_structure_of_mussel_samples_from_contact_zones_between_i_M_i_i_edulis_i_and_i_M_i_i_trossulus_i_/15045758 doi:10.1371/journal.pone.0249587.s002 |
op_rights |
CC BY 4.0 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1371/journal.pone.0249587.s002 |
_version_ |
1766339650268430336 |