Data_Sheet_1_Revealing the Characteristics of the Antarctic Snow Alga Chlorominima collina gen. et sp. nov. Through Taxonomy, Physiology, and Transcriptomics.docx

Snow algae play crucial roles in cold ecosystems, however, many aspects related to their biology, adaptations and especially their diversity are not well known. To improve the identification of snow algae from colored snow, in the present study we used a polyphasic approach to describe a new Antarct...

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Main Authors: Francisca E. Gálvez (10931562), Mónica Saldarriaga-Córdoba (4620637), Pirjo Huovinen (582334), Andrea X. Silva (10931565), Iván Gómez (582335)
Format: Dataset
Language:unknown
Published: 2021
Subjects:
Online Access:https://doi.org/10.3389/fpls.2021.662298.s001
id ftsmithonian:oai:figshare.com:article/14742315
record_format openpolar
spelling ftsmithonian:oai:figshare.com:article/14742315 2023-05-15T13:47:39+02:00 Data_Sheet_1_Revealing the Characteristics of the Antarctic Snow Alga Chlorominima collina gen. et sp. nov. Through Taxonomy, Physiology, and Transcriptomics.docx Francisca E. Gálvez (10931562) Mónica Saldarriaga-Córdoba (4620637) Pirjo Huovinen (582334) Andrea X. Silva (10931565) Iván Gómez (582335) 2021-06-07T05:44:22Z https://doi.org/10.3389/fpls.2021.662298.s001 unknown https://figshare.com/articles/dataset/Data_Sheet_1_Revealing_the_Characteristics_of_the_Antarctic_Snow_Alga_Chlorominima_collina_gen_et_sp_nov_Through_Taxonomy_Physiology_and_Transcriptomics_docx/14742315 doi:10.3389/fpls.2021.662298.s001 CC BY 4.0 CC-BY Botany Plant Biology Plant Systematics and Taxonomy Plant Cell and Molecular Biology Plant Developmental and Reproductive Biology Plant Pathology Plant Physiology Plant Biology not elsewhere classified Antarctic Chlorominima polyphasic approach psychrophilic snow algae cysts transcriptome Dataset 2021 ftsmithonian https://doi.org/10.3389/fpls.2021.662298.s001 2021-06-13T15:02:05Z Snow algae play crucial roles in cold ecosystems, however, many aspects related to their biology, adaptations and especially their diversity are not well known. To improve the identification of snow algae from colored snow, in the present study we used a polyphasic approach to describe a new Antarctic genus, Chlorominima with the species type Chlorominima collina. This new taxon was isolated of colored snow collected from the Collins Glacier (King George Island) in the Maritime Antarctic region. Microscopy revealed biflagellated ellipsoidal cells with a rounded posterior end, a C-shaped parietal chloroplast without a pyrenoid, eyespot, and discrete papillae. Several of these characteristics are typical of the genus Chloromonas, but the new isolate differs from the described species of this genus by the unusual small size of the cells, the presence of several vacuoles, the position of the nucleus and the shape of the chloroplast. Molecular analyzes confirm that the isolated alga does not belong to Chloromonas and therefore forms an independent lineage, which is closely related to other unidentified Antarctic and Arctic strains, forming a polar subclade in the Stephanosphaerinia phylogroup within the Chlamydomonadales. Secondary structure comparisons of the ITS2 rDNA marker support the idea that new strain is a distinct taxon within of Caudivolvoxa. Physiological experiments revealed psychrophilic characteristics, which are typical of true snow algae. This status was confirmed by the partial transcriptome obtained at 2°C, in which various cold-responsive and cryoprotective genes were identified. This study explores the systematics, cold acclimatization strategies and their implications for the Antarctic snow flora. Dataset Antarc* Antarctic Arctic Collins Glacier King George Island Unknown Arctic Antarctic The Antarctic King George Island Collins Glacier ENVELOPE(65.308,65.308,-73.829,-73.829)
institution Open Polar
collection Unknown
op_collection_id ftsmithonian
language unknown
topic Botany
Plant Biology
Plant Systematics and Taxonomy
Plant Cell and Molecular Biology
Plant Developmental and Reproductive Biology
Plant Pathology
Plant Physiology
Plant Biology not elsewhere classified
Antarctic
Chlorominima
polyphasic approach
psychrophilic
snow algae
cysts
transcriptome
spellingShingle Botany
Plant Biology
Plant Systematics and Taxonomy
Plant Cell and Molecular Biology
Plant Developmental and Reproductive Biology
Plant Pathology
Plant Physiology
Plant Biology not elsewhere classified
Antarctic
Chlorominima
polyphasic approach
psychrophilic
snow algae
cysts
transcriptome
Francisca E. Gálvez (10931562)
Mónica Saldarriaga-Córdoba (4620637)
Pirjo Huovinen (582334)
Andrea X. Silva (10931565)
Iván Gómez (582335)
Data_Sheet_1_Revealing the Characteristics of the Antarctic Snow Alga Chlorominima collina gen. et sp. nov. Through Taxonomy, Physiology, and Transcriptomics.docx
topic_facet Botany
Plant Biology
Plant Systematics and Taxonomy
Plant Cell and Molecular Biology
Plant Developmental and Reproductive Biology
Plant Pathology
Plant Physiology
Plant Biology not elsewhere classified
Antarctic
Chlorominima
polyphasic approach
psychrophilic
snow algae
cysts
transcriptome
description Snow algae play crucial roles in cold ecosystems, however, many aspects related to their biology, adaptations and especially their diversity are not well known. To improve the identification of snow algae from colored snow, in the present study we used a polyphasic approach to describe a new Antarctic genus, Chlorominima with the species type Chlorominima collina. This new taxon was isolated of colored snow collected from the Collins Glacier (King George Island) in the Maritime Antarctic region. Microscopy revealed biflagellated ellipsoidal cells with a rounded posterior end, a C-shaped parietal chloroplast without a pyrenoid, eyespot, and discrete papillae. Several of these characteristics are typical of the genus Chloromonas, but the new isolate differs from the described species of this genus by the unusual small size of the cells, the presence of several vacuoles, the position of the nucleus and the shape of the chloroplast. Molecular analyzes confirm that the isolated alga does not belong to Chloromonas and therefore forms an independent lineage, which is closely related to other unidentified Antarctic and Arctic strains, forming a polar subclade in the Stephanosphaerinia phylogroup within the Chlamydomonadales. Secondary structure comparisons of the ITS2 rDNA marker support the idea that new strain is a distinct taxon within of Caudivolvoxa. Physiological experiments revealed psychrophilic characteristics, which are typical of true snow algae. This status was confirmed by the partial transcriptome obtained at 2°C, in which various cold-responsive and cryoprotective genes were identified. This study explores the systematics, cold acclimatization strategies and their implications for the Antarctic snow flora.
format Dataset
author Francisca E. Gálvez (10931562)
Mónica Saldarriaga-Córdoba (4620637)
Pirjo Huovinen (582334)
Andrea X. Silva (10931565)
Iván Gómez (582335)
author_facet Francisca E. Gálvez (10931562)
Mónica Saldarriaga-Córdoba (4620637)
Pirjo Huovinen (582334)
Andrea X. Silva (10931565)
Iván Gómez (582335)
author_sort Francisca E. Gálvez (10931562)
title Data_Sheet_1_Revealing the Characteristics of the Antarctic Snow Alga Chlorominima collina gen. et sp. nov. Through Taxonomy, Physiology, and Transcriptomics.docx
title_short Data_Sheet_1_Revealing the Characteristics of the Antarctic Snow Alga Chlorominima collina gen. et sp. nov. Through Taxonomy, Physiology, and Transcriptomics.docx
title_full Data_Sheet_1_Revealing the Characteristics of the Antarctic Snow Alga Chlorominima collina gen. et sp. nov. Through Taxonomy, Physiology, and Transcriptomics.docx
title_fullStr Data_Sheet_1_Revealing the Characteristics of the Antarctic Snow Alga Chlorominima collina gen. et sp. nov. Through Taxonomy, Physiology, and Transcriptomics.docx
title_full_unstemmed Data_Sheet_1_Revealing the Characteristics of the Antarctic Snow Alga Chlorominima collina gen. et sp. nov. Through Taxonomy, Physiology, and Transcriptomics.docx
title_sort data_sheet_1_revealing the characteristics of the antarctic snow alga chlorominima collina gen. et sp. nov. through taxonomy, physiology, and transcriptomics.docx
publishDate 2021
url https://doi.org/10.3389/fpls.2021.662298.s001
long_lat ENVELOPE(65.308,65.308,-73.829,-73.829)
geographic Arctic
Antarctic
The Antarctic
King George Island
Collins Glacier
geographic_facet Arctic
Antarctic
The Antarctic
King George Island
Collins Glacier
genre Antarc*
Antarctic
Arctic
Collins Glacier
King George Island
genre_facet Antarc*
Antarctic
Arctic
Collins Glacier
King George Island
op_relation https://figshare.com/articles/dataset/Data_Sheet_1_Revealing_the_Characteristics_of_the_Antarctic_Snow_Alga_Chlorominima_collina_gen_et_sp_nov_Through_Taxonomy_Physiology_and_Transcriptomics_docx/14742315
doi:10.3389/fpls.2021.662298.s001
op_rights CC BY 4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.3389/fpls.2021.662298.s001
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