Additional file 6 of The transcriptomic responses of Atlantic salmon (Salmo salar) to high temperature stress alone, and in combination with moderate hypoxia
Additional file 6 Results of GO/pathway term network analysis (ClueGO) associated with down-regulated differentially expressed genes (DEGs) of the Warm & Hypoxic (WH) treatment group. Listed are the significantly enriched Gene Ontology (GO) terms, and KEGG or Reactome pathways (hypergeometric te...
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ftsmithonian:oai:figshare.com:article/14404409 2023-05-15T15:32:08+02:00 Additional file 6 of The transcriptomic responses of Atlantic salmon (Salmo salar) to high temperature stress alone, and in combination with moderate hypoxia Anne Beemelmanns (10588016) Fábio S. Zanuzzo (10588019) Xi Xue (10588022) Rebeccah M. Sandrelli (10347606) Matthew L. Rise (6796409) A. Kurt Gamperl (9984239) 2021-04-12T05:00:00Z https://doi.org/10.6084/m9.figshare.14404409.v1 unknown https://figshare.com/articles/dataset/Additional_file_6_of_The_transcriptomic_responses_of_Atlantic_salmon_Salmo_salar_to_high_temperature_stress_alone_and_in_combination_with_moderate_hypoxia/14404409 doi:10.6084/m9.figshare.14404409.v1 CC BY + CC0 CC0 CC-BY Genetics Climate change Increasing temperature Hypoxia Transcriptomics Biomarker genes Aquaculture Dataset 2021 ftsmithonian https://doi.org/10.6084/m9.figshare.14404409.v1 2021-05-05T18:37:15Z Additional file 6 Results of GO/pathway term network analysis (ClueGO) associated with down-regulated differentially expressed genes (DEGs) of the Warm & Hypoxic (WH) treatment group. Listed are the significantly enriched Gene Ontology (GO) terms, and KEGG or Reactome pathways (hypergeometric test p < 0.05 with Benjamini-Hochberg correction). GO/pathway term annotations were obtained using the GO database for biological process, cellular component, molecular function, and immune processes, and the KEGG and Reactome pathway databases. The enriched GO/pathway terms are ordered according to ten functional themes: Heat Shock Response (#1), Cellular Stress (#2), Oxidative Stress (#3), Apoptosis (#4), Immune Response (#5), Protein Processing & Localization (#6), Transcription (#7), Proteolysis (#8), Catabolic Processes (#9) and Cellular Metabolic Processes (#10). The enriched GO/pathway terms are illustrated in corresponding network Fig. 4b. Dataset Atlantic salmon Salmo salar Unknown |
institution |
Open Polar |
collection |
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op_collection_id |
ftsmithonian |
language |
unknown |
topic |
Genetics Climate change Increasing temperature Hypoxia Transcriptomics Biomarker genes Aquaculture |
spellingShingle |
Genetics Climate change Increasing temperature Hypoxia Transcriptomics Biomarker genes Aquaculture Anne Beemelmanns (10588016) Fábio S. Zanuzzo (10588019) Xi Xue (10588022) Rebeccah M. Sandrelli (10347606) Matthew L. Rise (6796409) A. Kurt Gamperl (9984239) Additional file 6 of The transcriptomic responses of Atlantic salmon (Salmo salar) to high temperature stress alone, and in combination with moderate hypoxia |
topic_facet |
Genetics Climate change Increasing temperature Hypoxia Transcriptomics Biomarker genes Aquaculture |
description |
Additional file 6 Results of GO/pathway term network analysis (ClueGO) associated with down-regulated differentially expressed genes (DEGs) of the Warm & Hypoxic (WH) treatment group. Listed are the significantly enriched Gene Ontology (GO) terms, and KEGG or Reactome pathways (hypergeometric test p < 0.05 with Benjamini-Hochberg correction). GO/pathway term annotations were obtained using the GO database for biological process, cellular component, molecular function, and immune processes, and the KEGG and Reactome pathway databases. The enriched GO/pathway terms are ordered according to ten functional themes: Heat Shock Response (#1), Cellular Stress (#2), Oxidative Stress (#3), Apoptosis (#4), Immune Response (#5), Protein Processing & Localization (#6), Transcription (#7), Proteolysis (#8), Catabolic Processes (#9) and Cellular Metabolic Processes (#10). The enriched GO/pathway terms are illustrated in corresponding network Fig. 4b. |
format |
Dataset |
author |
Anne Beemelmanns (10588016) Fábio S. Zanuzzo (10588019) Xi Xue (10588022) Rebeccah M. Sandrelli (10347606) Matthew L. Rise (6796409) A. Kurt Gamperl (9984239) |
author_facet |
Anne Beemelmanns (10588016) Fábio S. Zanuzzo (10588019) Xi Xue (10588022) Rebeccah M. Sandrelli (10347606) Matthew L. Rise (6796409) A. Kurt Gamperl (9984239) |
author_sort |
Anne Beemelmanns (10588016) |
title |
Additional file 6 of The transcriptomic responses of Atlantic salmon (Salmo salar) to high temperature stress alone, and in combination with moderate hypoxia |
title_short |
Additional file 6 of The transcriptomic responses of Atlantic salmon (Salmo salar) to high temperature stress alone, and in combination with moderate hypoxia |
title_full |
Additional file 6 of The transcriptomic responses of Atlantic salmon (Salmo salar) to high temperature stress alone, and in combination with moderate hypoxia |
title_fullStr |
Additional file 6 of The transcriptomic responses of Atlantic salmon (Salmo salar) to high temperature stress alone, and in combination with moderate hypoxia |
title_full_unstemmed |
Additional file 6 of The transcriptomic responses of Atlantic salmon (Salmo salar) to high temperature stress alone, and in combination with moderate hypoxia |
title_sort |
additional file 6 of the transcriptomic responses of atlantic salmon (salmo salar) to high temperature stress alone, and in combination with moderate hypoxia |
publishDate |
2021 |
url |
https://doi.org/10.6084/m9.figshare.14404409.v1 |
genre |
Atlantic salmon Salmo salar |
genre_facet |
Atlantic salmon Salmo salar |
op_relation |
https://figshare.com/articles/dataset/Additional_file_6_of_The_transcriptomic_responses_of_Atlantic_salmon_Salmo_salar_to_high_temperature_stress_alone_and_in_combination_with_moderate_hypoxia/14404409 doi:10.6084/m9.figshare.14404409.v1 |
op_rights |
CC BY + CC0 |
op_rightsnorm |
CC0 CC-BY |
op_doi |
https://doi.org/10.6084/m9.figshare.14404409.v1 |
_version_ |
1766362636153257984 |