Additional file 6 of The transcriptomic responses of Atlantic salmon (Salmo salar) to high temperature stress alone, and in combination with moderate hypoxia

Additional file 6 Results of GO/pathway term network analysis (ClueGO) associated with down-regulated differentially expressed genes (DEGs) of the Warm & Hypoxic (WH) treatment group. Listed are the significantly enriched Gene Ontology (GO) terms, and KEGG or Reactome pathways (hypergeometric te...

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Bibliographic Details
Main Authors: Anne Beemelmanns (10588016), Fábio S. Zanuzzo (10588019), Xi Xue (10588022), Rebeccah M. Sandrelli (10347606), Matthew L. Rise (6796409), A. Kurt Gamperl (9984239)
Format: Dataset
Language:unknown
Published: 2021
Subjects:
Genetics
Climate change
Increasing temperature
Hypoxia
Transcriptomics
Biomarker genes
Aquaculture
Atlantic salmon
Salmo salar
Online Access:https://doi.org/10.6084/m9.figshare.14404409.v1
Description
Summary:Additional file 6 Results of GO/pathway term network analysis (ClueGO) associated with down-regulated differentially expressed genes (DEGs) of the Warm & Hypoxic (WH) treatment group. Listed are the significantly enriched Gene Ontology (GO) terms, and KEGG or Reactome pathways (hypergeometric test p < 0.05 with Benjamini-Hochberg correction). GO/pathway term annotations were obtained using the GO database for biological process, cellular component, molecular function, and immune processes, and the KEGG and Reactome pathway databases. The enriched GO/pathway terms are ordered according to ten functional themes: Heat Shock Response (#1), Cellular Stress (#2), Oxidative Stress (#3), Apoptosis (#4), Immune Response (#5), Protein Processing & Localization (#6), Transcription (#7), Proteolysis (#8), Catabolic Processes (#9) and Cellular Metabolic Processes (#10). The enriched GO/pathway terms are illustrated in corresponding network Fig. 4b.

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