Additional file 5 of The transcriptomic responses of Atlantic salmon (Salmo salar) to high temperature stress alone, and in combination with moderate hypoxia

Additional file 5 Results of GO/pathway term network analysis (ClueGO) associated with down-regulated differentially expressed genes (DEGs) of the Warm & Normoxic (WN) treatment group. Listed are the significantly enriched Gene Ontology (GO) terms, and KEGG or Reactome pathways (hypergeometric t...

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Main Authors: Anne Beemelmanns (10588016), Fábio S. Zanuzzo (10588019), Xi Xue (10588022), Rebeccah M. Sandrelli (10347606), Matthew L. Rise (6796409), A. Kurt Gamperl (9984239)
Format: Dataset
Language:unknown
Published: 2021
Subjects:
Online Access:https://doi.org/10.6084/m9.figshare.14404406.v1
id ftsmithonian:oai:figshare.com:article/14404406
record_format openpolar
spelling ftsmithonian:oai:figshare.com:article/14404406 2023-05-15T15:32:08+02:00 Additional file 5 of The transcriptomic responses of Atlantic salmon (Salmo salar) to high temperature stress alone, and in combination with moderate hypoxia Anne Beemelmanns (10588016) Fábio S. Zanuzzo (10588019) Xi Xue (10588022) Rebeccah M. Sandrelli (10347606) Matthew L. Rise (6796409) A. Kurt Gamperl (9984239) 2021-04-12T05:00:00Z https://doi.org/10.6084/m9.figshare.14404406.v1 unknown https://figshare.com/articles/dataset/Additional_file_5_of_The_transcriptomic_responses_of_Atlantic_salmon_Salmo_salar_to_high_temperature_stress_alone_and_in_combination_with_moderate_hypoxia/14404406 doi:10.6084/m9.figshare.14404406.v1 CC BY + CC0 CC0 CC-BY Genetics Climate change Increasing temperature Hypoxia Transcriptomics Biomarker genes Aquaculture Dataset 2021 ftsmithonian https://doi.org/10.6084/m9.figshare.14404406.v1 2021-05-05T18:37:15Z Additional file 5 Results of GO/pathway term network analysis (ClueGO) associated with down-regulated differentially expressed genes (DEGs) of the Warm & Normoxic (WN) treatment group. Listed are the significantly enriched Gene Ontology (GO) terms, and KEGG or Reactome pathways (hypergeometric test p < 0.05 with Benjamini-Hochberg correction). GO/pathway term annotations were obtained using the GO database for biological process, cellular component, molecular function, and immune processes, and the KEGG and Reactome pathway databases. The enriched GO/pathway terms are ordered according to ten functional themes: Heat Shock Response (#1), Cellular Stress (#2), Oxidative Stress (#3), Apoptosis (#4), Immune Response (#5), Protein Processing & Localization (#6), Transcription (#7), Proteolysis (#8), Catabolic Processes (#9) and Cellular Metabolic Processes (#10). The enriched GO/pathway terms are illustrated in corresponding network Fig. 3b. Dataset Atlantic salmon Salmo salar Unknown
institution Open Polar
collection Unknown
op_collection_id ftsmithonian
language unknown
topic Genetics
Climate change
Increasing temperature
Hypoxia
Transcriptomics
Biomarker genes
Aquaculture
spellingShingle Genetics
Climate change
Increasing temperature
Hypoxia
Transcriptomics
Biomarker genes
Aquaculture
Anne Beemelmanns (10588016)
Fábio S. Zanuzzo (10588019)
Xi Xue (10588022)
Rebeccah M. Sandrelli (10347606)
Matthew L. Rise (6796409)
A. Kurt Gamperl (9984239)
Additional file 5 of The transcriptomic responses of Atlantic salmon (Salmo salar) to high temperature stress alone, and in combination with moderate hypoxia
topic_facet Genetics
Climate change
Increasing temperature
Hypoxia
Transcriptomics
Biomarker genes
Aquaculture
description Additional file 5 Results of GO/pathway term network analysis (ClueGO) associated with down-regulated differentially expressed genes (DEGs) of the Warm & Normoxic (WN) treatment group. Listed are the significantly enriched Gene Ontology (GO) terms, and KEGG or Reactome pathways (hypergeometric test p < 0.05 with Benjamini-Hochberg correction). GO/pathway term annotations were obtained using the GO database for biological process, cellular component, molecular function, and immune processes, and the KEGG and Reactome pathway databases. The enriched GO/pathway terms are ordered according to ten functional themes: Heat Shock Response (#1), Cellular Stress (#2), Oxidative Stress (#3), Apoptosis (#4), Immune Response (#5), Protein Processing & Localization (#6), Transcription (#7), Proteolysis (#8), Catabolic Processes (#9) and Cellular Metabolic Processes (#10). The enriched GO/pathway terms are illustrated in corresponding network Fig. 3b.
format Dataset
author Anne Beemelmanns (10588016)
Fábio S. Zanuzzo (10588019)
Xi Xue (10588022)
Rebeccah M. Sandrelli (10347606)
Matthew L. Rise (6796409)
A. Kurt Gamperl (9984239)
author_facet Anne Beemelmanns (10588016)
Fábio S. Zanuzzo (10588019)
Xi Xue (10588022)
Rebeccah M. Sandrelli (10347606)
Matthew L. Rise (6796409)
A. Kurt Gamperl (9984239)
author_sort Anne Beemelmanns (10588016)
title Additional file 5 of The transcriptomic responses of Atlantic salmon (Salmo salar) to high temperature stress alone, and in combination with moderate hypoxia
title_short Additional file 5 of The transcriptomic responses of Atlantic salmon (Salmo salar) to high temperature stress alone, and in combination with moderate hypoxia
title_full Additional file 5 of The transcriptomic responses of Atlantic salmon (Salmo salar) to high temperature stress alone, and in combination with moderate hypoxia
title_fullStr Additional file 5 of The transcriptomic responses of Atlantic salmon (Salmo salar) to high temperature stress alone, and in combination with moderate hypoxia
title_full_unstemmed Additional file 5 of The transcriptomic responses of Atlantic salmon (Salmo salar) to high temperature stress alone, and in combination with moderate hypoxia
title_sort additional file 5 of the transcriptomic responses of atlantic salmon (salmo salar) to high temperature stress alone, and in combination with moderate hypoxia
publishDate 2021
url https://doi.org/10.6084/m9.figshare.14404406.v1
genre Atlantic salmon
Salmo salar
genre_facet Atlantic salmon
Salmo salar
op_relation https://figshare.com/articles/dataset/Additional_file_5_of_The_transcriptomic_responses_of_Atlantic_salmon_Salmo_salar_to_high_temperature_stress_alone_and_in_combination_with_moderate_hypoxia/14404406
doi:10.6084/m9.figshare.14404406.v1
op_rights CC BY + CC0
op_rightsnorm CC0
CC-BY
op_doi https://doi.org/10.6084/m9.figshare.14404406.v1
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