Identified outliers before and after disequilibrium pruning among red fox populations across North America.

Describes (per SNP): Location, gene association, and predicted gene function in reference to the dog genome. SNPs are further identified to which sub-dataset they belong; red fox from Alaska and Ontario or red fox only from Alaska: i) identified outlier ii) identified outlier retained after filterin...

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Bibliographic Details
Main Authors: Tristan M. Baecklund (10573715), Jaycee Morrison (10573718), Michael E. Donaldson (4431115), Karsten Hueffer (606200), Christopher J. Kyle (8136867)
Format: Dataset
Language:unknown
Published: 2021
Subjects:
Online Access:https://doi.org/10.1371/journal.pone.0249176.s010
id ftsmithonian:oai:figshare.com:article/14389703
record_format openpolar
spelling ftsmithonian:oai:figshare.com:article/14389703 2023-05-15T15:50:01+02:00 Identified outliers before and after disequilibrium pruning among red fox populations across North America. Tristan M. Baecklund (10573715) Jaycee Morrison (10573718) Michael E. Donaldson (4431115) Karsten Hueffer (606200) Christopher J. Kyle (8136867) 2021-04-08T17:48:11Z https://doi.org/10.1371/journal.pone.0249176.s010 unknown https://figshare.com/articles/dataset/Identified_outliers_before_and_after_disequilibrium_pruning_among_red_fox_populations_across_North_America_/14389703 doi:10.1371/journal.pone.0249176.s010 CC BY 4.0 CC-BY Genetics Evolutionary Biology Ecology Infectious Diseases Biological Sciences not elsewhere classified toll-like receptor genes cause missense mutations AR variants 30 outlier SNPs disease control strategies Vulpes vulpes rabies variant distributions fox populations 116 genomic regions Dataset 2021 ftsmithonian https://doi.org/10.1371/journal.pone.0249176.s010 2021-04-11T15:09:24Z Describes (per SNP): Location, gene association, and predicted gene function in reference to the dog genome. SNPs are further identified to which sub-dataset they belong; red fox from Alaska and Ontario or red fox only from Alaska: i) identified outlier ii) identified outlier retained after filtering iii) missense SNP with potential to alter protein function and finally if the SNP was identified as an outlier by multiple tests. All BLASTp predicted functions are based upon Canis lupus familiaris unless otherwise specified. (XLSX) Dataset Canis lupus Alaska Unknown
institution Open Polar
collection Unknown
op_collection_id ftsmithonian
language unknown
topic Genetics
Evolutionary Biology
Ecology
Infectious Diseases
Biological Sciences not elsewhere classified
toll-like receptor genes
cause missense mutations
AR variants
30 outlier SNPs
disease control strategies
Vulpes vulpes
rabies variant distributions
fox populations
116 genomic regions
spellingShingle Genetics
Evolutionary Biology
Ecology
Infectious Diseases
Biological Sciences not elsewhere classified
toll-like receptor genes
cause missense mutations
AR variants
30 outlier SNPs
disease control strategies
Vulpes vulpes
rabies variant distributions
fox populations
116 genomic regions
Tristan M. Baecklund (10573715)
Jaycee Morrison (10573718)
Michael E. Donaldson (4431115)
Karsten Hueffer (606200)
Christopher J. Kyle (8136867)
Identified outliers before and after disequilibrium pruning among red fox populations across North America.
topic_facet Genetics
Evolutionary Biology
Ecology
Infectious Diseases
Biological Sciences not elsewhere classified
toll-like receptor genes
cause missense mutations
AR variants
30 outlier SNPs
disease control strategies
Vulpes vulpes
rabies variant distributions
fox populations
116 genomic regions
description Describes (per SNP): Location, gene association, and predicted gene function in reference to the dog genome. SNPs are further identified to which sub-dataset they belong; red fox from Alaska and Ontario or red fox only from Alaska: i) identified outlier ii) identified outlier retained after filtering iii) missense SNP with potential to alter protein function and finally if the SNP was identified as an outlier by multiple tests. All BLASTp predicted functions are based upon Canis lupus familiaris unless otherwise specified. (XLSX)
format Dataset
author Tristan M. Baecklund (10573715)
Jaycee Morrison (10573718)
Michael E. Donaldson (4431115)
Karsten Hueffer (606200)
Christopher J. Kyle (8136867)
author_facet Tristan M. Baecklund (10573715)
Jaycee Morrison (10573718)
Michael E. Donaldson (4431115)
Karsten Hueffer (606200)
Christopher J. Kyle (8136867)
author_sort Tristan M. Baecklund (10573715)
title Identified outliers before and after disequilibrium pruning among red fox populations across North America.
title_short Identified outliers before and after disequilibrium pruning among red fox populations across North America.
title_full Identified outliers before and after disequilibrium pruning among red fox populations across North America.
title_fullStr Identified outliers before and after disequilibrium pruning among red fox populations across North America.
title_full_unstemmed Identified outliers before and after disequilibrium pruning among red fox populations across North America.
title_sort identified outliers before and after disequilibrium pruning among red fox populations across north america.
publishDate 2021
url https://doi.org/10.1371/journal.pone.0249176.s010
genre Canis lupus
Alaska
genre_facet Canis lupus
Alaska
op_relation https://figshare.com/articles/dataset/Identified_outliers_before_and_after_disequilibrium_pruning_among_red_fox_populations_across_North_America_/14389703
doi:10.1371/journal.pone.0249176.s010
op_rights CC BY 4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.1371/journal.pone.0249176.s010
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