Table_1_Heterogeneity of Microbial Communities in Soils From the Antarctic Peninsula Region.docx

Ice-free areas represent less than 1% of the Antarctic surface. However, climate change models predict a significant increase in temperatures in the coming decades, triggering a relevant reduction of the ice-covered surface. Microorganisms, adapted to the extreme and fluctuating conditions, are the...

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Main Authors: Pablo Almela (6520748), Ana Justel (301130), Antonio Quesada (1680352)
Format: Dataset
Language:unknown
Published: 2021
Subjects:
Online Access:https://doi.org/10.3389/fmicb.2021.628792.s002
id ftsmithonian:oai:figshare.com:article/14036906
record_format openpolar
spelling ftsmithonian:oai:figshare.com:article/14036906 2023-05-15T13:46:29+02:00 Table_1_Heterogeneity of Microbial Communities in Soils From the Antarctic Peninsula Region.docx Pablo Almela (6520748) Ana Justel (301130) Antonio Quesada (1680352) 2021-02-16T04:10:22Z https://doi.org/10.3389/fmicb.2021.628792.s002 unknown https://figshare.com/articles/dataset/Table_1_Heterogeneity_of_Microbial_Communities_in_Soils_From_the_Antarctic_Peninsula_Region_docx/14036906 doi:10.3389/fmicb.2021.628792.s002 CC BY 4.0 CC-BY Microbiology Microbial Genetics Microbial Ecology Mycology microorgamisms soil distribution heterogeneity homogeneity Antarctica Dataset 2021 ftsmithonian https://doi.org/10.3389/fmicb.2021.628792.s002 2021-02-26T11:24:51Z Ice-free areas represent less than 1% of the Antarctic surface. However, climate change models predict a significant increase in temperatures in the coming decades, triggering a relevant reduction of the ice-covered surface. Microorganisms, adapted to the extreme and fluctuating conditions, are the dominant biota. In this article we analyze the diversity and composition of soil bacterial communities in 52 soil samples on three scales: (i) fine scale, where we compare the differences in the microbial community between top-stratum soils (0–2 cm) and deeper-stratum soils (5–10 cm) at the same sampling point; (ii) medium scale, in which we compare the composition of the microbial community of top-stratum soils from different sampling points within the same sampling location; and (iii) coarse scale, where we compare communities between comparable ecosystems located hundreds of kilometers apart along the Antarctic Peninsula. The results suggest that in ice-free soils exposed for longer periods of time (millennia) microbial communities are significantly different along the soil profiles. However, in recently (decades) deglaciated soils the communities are not different along the soil profile. Furthermore, the microbial communities found in soils at the different sampling locations show a high degree of heterogeneity, with a relevant proportion of unique amplicon sequence variants (ASV) that appeared mainly in low abundance, and only at a single sampling location. The Core90 community, defined as the ASVs shared by 90% of the soils from the 4 sampling locations, was composed of 26 ASVs, representing a small percentage of the total sequences. Nevertheless, the taxonomic composition of the Core80 (ASVs shared by 80% of sampling points per location) of the different sampling locations, was very similar, as they were mostly defined by 20 common taxa, representing up to 75.7% of the sequences of the Core80 communities, suggesting a greater homogeneity of soil bacterial taxa among distant locations. Dataset Antarc* Antarctic Antarctic Peninsula Antarctica Unknown Antarctic Antarctic Peninsula The Antarctic
institution Open Polar
collection Unknown
op_collection_id ftsmithonian
language unknown
topic Microbiology
Microbial Genetics
Microbial Ecology
Mycology
microorgamisms
soil
distribution
heterogeneity
homogeneity
Antarctica
spellingShingle Microbiology
Microbial Genetics
Microbial Ecology
Mycology
microorgamisms
soil
distribution
heterogeneity
homogeneity
Antarctica
Pablo Almela (6520748)
Ana Justel (301130)
Antonio Quesada (1680352)
Table_1_Heterogeneity of Microbial Communities in Soils From the Antarctic Peninsula Region.docx
topic_facet Microbiology
Microbial Genetics
Microbial Ecology
Mycology
microorgamisms
soil
distribution
heterogeneity
homogeneity
Antarctica
description Ice-free areas represent less than 1% of the Antarctic surface. However, climate change models predict a significant increase in temperatures in the coming decades, triggering a relevant reduction of the ice-covered surface. Microorganisms, adapted to the extreme and fluctuating conditions, are the dominant biota. In this article we analyze the diversity and composition of soil bacterial communities in 52 soil samples on three scales: (i) fine scale, where we compare the differences in the microbial community between top-stratum soils (0–2 cm) and deeper-stratum soils (5–10 cm) at the same sampling point; (ii) medium scale, in which we compare the composition of the microbial community of top-stratum soils from different sampling points within the same sampling location; and (iii) coarse scale, where we compare communities between comparable ecosystems located hundreds of kilometers apart along the Antarctic Peninsula. The results suggest that in ice-free soils exposed for longer periods of time (millennia) microbial communities are significantly different along the soil profiles. However, in recently (decades) deglaciated soils the communities are not different along the soil profile. Furthermore, the microbial communities found in soils at the different sampling locations show a high degree of heterogeneity, with a relevant proportion of unique amplicon sequence variants (ASV) that appeared mainly in low abundance, and only at a single sampling location. The Core90 community, defined as the ASVs shared by 90% of the soils from the 4 sampling locations, was composed of 26 ASVs, representing a small percentage of the total sequences. Nevertheless, the taxonomic composition of the Core80 (ASVs shared by 80% of sampling points per location) of the different sampling locations, was very similar, as they were mostly defined by 20 common taxa, representing up to 75.7% of the sequences of the Core80 communities, suggesting a greater homogeneity of soil bacterial taxa among distant locations.
format Dataset
author Pablo Almela (6520748)
Ana Justel (301130)
Antonio Quesada (1680352)
author_facet Pablo Almela (6520748)
Ana Justel (301130)
Antonio Quesada (1680352)
author_sort Pablo Almela (6520748)
title Table_1_Heterogeneity of Microbial Communities in Soils From the Antarctic Peninsula Region.docx
title_short Table_1_Heterogeneity of Microbial Communities in Soils From the Antarctic Peninsula Region.docx
title_full Table_1_Heterogeneity of Microbial Communities in Soils From the Antarctic Peninsula Region.docx
title_fullStr Table_1_Heterogeneity of Microbial Communities in Soils From the Antarctic Peninsula Region.docx
title_full_unstemmed Table_1_Heterogeneity of Microbial Communities in Soils From the Antarctic Peninsula Region.docx
title_sort table_1_heterogeneity of microbial communities in soils from the antarctic peninsula region.docx
publishDate 2021
url https://doi.org/10.3389/fmicb.2021.628792.s002
geographic Antarctic
Antarctic Peninsula
The Antarctic
geographic_facet Antarctic
Antarctic Peninsula
The Antarctic
genre Antarc*
Antarctic
Antarctic Peninsula
Antarctica
genre_facet Antarc*
Antarctic
Antarctic Peninsula
Antarctica
op_relation https://figshare.com/articles/dataset/Table_1_Heterogeneity_of_Microbial_Communities_in_Soils_From_the_Antarctic_Peninsula_Region_docx/14036906
doi:10.3389/fmicb.2021.628792.s002
op_rights CC BY 4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.3389/fmicb.2021.628792.s002
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