Table_1_Molecular Systematics of the Long-Snouted Deep Water Dogfish (Centrophoridae, Deania) With Implications for Identification, Taxonomy, and Conservation.pdf

According to the most recent taxonomical revision, the deep-sea dogfish genus Deania encompasses four species. Three of them, D. calcea, D. profundorum, and D. hystricosa, occur in the North Atlantic. Whilst D. profundorum can be identified by the presence of a subcaudal keel, the other two species...

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Main Authors: Sergio Stefanni (122404), Diana Catarino (3264411), Pedro A. Ribeiro (10010762), Mafalda Freitas (8933297), Gui M. Menezes (7528553), Francis Neat (409563), David Stanković (3264414)
Format: Dataset
Language:unknown
Published: 2021
Subjects:
Online Access:https://doi.org/10.3389/fmars.2020.588192.s005
id ftsmithonian:oai:figshare.com:article/13615787
record_format openpolar
spelling ftsmithonian:oai:figshare.com:article/13615787 2023-05-15T17:35:10+02:00 Table_1_Molecular Systematics of the Long-Snouted Deep Water Dogfish (Centrophoridae, Deania) With Implications for Identification, Taxonomy, and Conservation.pdf Sergio Stefanni (122404) Diana Catarino (3264411) Pedro A. Ribeiro (10010762) Mafalda Freitas (8933297) Gui M. Menezes (7528553) Francis Neat (409563) David Stanković (3264414) 2021-01-20T16:18:38Z https://doi.org/10.3389/fmars.2020.588192.s005 unknown https://figshare.com/articles/dataset/Table_1_Molecular_Systematics_of_the_Long-Snouted_Deep_Water_Dogfish_Centrophoridae_Deania_With_Implications_for_Identification_Taxonomy_and_Conservation_pdf/13615787 doi:10.3389/fmars.2020.588192.s005 CC BY 4.0 CC-BY Oceanography Marine Biology Marine Geoscience Biological Oceanography Chemical Oceanography Physical Oceanography Marine Engineering deep-sea sharks fishery by-catch phylogeny Atlantic Ocean deep-sea dogfish skin denticles Dataset 2021 ftsmithonian https://doi.org/10.3389/fmars.2020.588192.s005 2021-02-03T09:27:11Z According to the most recent taxonomical revision, the deep-sea dogfish genus Deania encompasses four species. Three of them, D. calcea, D. profundorum, and D. hystricosa, occur in the North Atlantic. Whilst D. profundorum can be identified by the presence of a subcaudal keel, the other two species are not easily visually distinguished. Uncertainties over identification raises concerns over stock units and whether management plans are adequate. In this study we compared onboard visual identification of Deania specimens, with morphological inspection of skin denticles under stereo microscope and with independent molecular taxonomical assignment using two molecular markers. Particular emphasis was paid to specimens identified as D. calcea and D. hystricosa in the NE Atlantic where these species potentially occur sympatrically and may be easily confused. In the past the species have been discriminated on the basis of the size of skin denticles (skin roughness), but our study showed that the crown length of skin denticles covaries with size (and sex), irrespective of species, and therefore this is not a reliable morphological character and should not be used to discriminate between the two species. Phylogenetic analyses did not indicate that D. hystricosa to be a distinct lineage from D. calcea. Interestingly, however four individuals (specimens from: UK, Azores Is., Madeira Is. and Seine seamount) formed a well-defined sub-clade nested within the D. calcea clade, possibly a signature of a past vicariance event or a result of coalescent stochasticity. Dataset North Atlantic Unknown
institution Open Polar
collection Unknown
op_collection_id ftsmithonian
language unknown
topic Oceanography
Marine Biology
Marine Geoscience
Biological Oceanography
Chemical Oceanography
Physical Oceanography
Marine Engineering
deep-sea sharks
fishery by-catch
phylogeny
Atlantic Ocean
deep-sea dogfish
skin denticles
spellingShingle Oceanography
Marine Biology
Marine Geoscience
Biological Oceanography
Chemical Oceanography
Physical Oceanography
Marine Engineering
deep-sea sharks
fishery by-catch
phylogeny
Atlantic Ocean
deep-sea dogfish
skin denticles
Sergio Stefanni (122404)
Diana Catarino (3264411)
Pedro A. Ribeiro (10010762)
Mafalda Freitas (8933297)
Gui M. Menezes (7528553)
Francis Neat (409563)
David Stanković (3264414)
Table_1_Molecular Systematics of the Long-Snouted Deep Water Dogfish (Centrophoridae, Deania) With Implications for Identification, Taxonomy, and Conservation.pdf
topic_facet Oceanography
Marine Biology
Marine Geoscience
Biological Oceanography
Chemical Oceanography
Physical Oceanography
Marine Engineering
deep-sea sharks
fishery by-catch
phylogeny
Atlantic Ocean
deep-sea dogfish
skin denticles
description According to the most recent taxonomical revision, the deep-sea dogfish genus Deania encompasses four species. Three of them, D. calcea, D. profundorum, and D. hystricosa, occur in the North Atlantic. Whilst D. profundorum can be identified by the presence of a subcaudal keel, the other two species are not easily visually distinguished. Uncertainties over identification raises concerns over stock units and whether management plans are adequate. In this study we compared onboard visual identification of Deania specimens, with morphological inspection of skin denticles under stereo microscope and with independent molecular taxonomical assignment using two molecular markers. Particular emphasis was paid to specimens identified as D. calcea and D. hystricosa in the NE Atlantic where these species potentially occur sympatrically and may be easily confused. In the past the species have been discriminated on the basis of the size of skin denticles (skin roughness), but our study showed that the crown length of skin denticles covaries with size (and sex), irrespective of species, and therefore this is not a reliable morphological character and should not be used to discriminate between the two species. Phylogenetic analyses did not indicate that D. hystricosa to be a distinct lineage from D. calcea. Interestingly, however four individuals (specimens from: UK, Azores Is., Madeira Is. and Seine seamount) formed a well-defined sub-clade nested within the D. calcea clade, possibly a signature of a past vicariance event or a result of coalescent stochasticity.
format Dataset
author Sergio Stefanni (122404)
Diana Catarino (3264411)
Pedro A. Ribeiro (10010762)
Mafalda Freitas (8933297)
Gui M. Menezes (7528553)
Francis Neat (409563)
David Stanković (3264414)
author_facet Sergio Stefanni (122404)
Diana Catarino (3264411)
Pedro A. Ribeiro (10010762)
Mafalda Freitas (8933297)
Gui M. Menezes (7528553)
Francis Neat (409563)
David Stanković (3264414)
author_sort Sergio Stefanni (122404)
title Table_1_Molecular Systematics of the Long-Snouted Deep Water Dogfish (Centrophoridae, Deania) With Implications for Identification, Taxonomy, and Conservation.pdf
title_short Table_1_Molecular Systematics of the Long-Snouted Deep Water Dogfish (Centrophoridae, Deania) With Implications for Identification, Taxonomy, and Conservation.pdf
title_full Table_1_Molecular Systematics of the Long-Snouted Deep Water Dogfish (Centrophoridae, Deania) With Implications for Identification, Taxonomy, and Conservation.pdf
title_fullStr Table_1_Molecular Systematics of the Long-Snouted Deep Water Dogfish (Centrophoridae, Deania) With Implications for Identification, Taxonomy, and Conservation.pdf
title_full_unstemmed Table_1_Molecular Systematics of the Long-Snouted Deep Water Dogfish (Centrophoridae, Deania) With Implications for Identification, Taxonomy, and Conservation.pdf
title_sort table_1_molecular systematics of the long-snouted deep water dogfish (centrophoridae, deania) with implications for identification, taxonomy, and conservation.pdf
publishDate 2021
url https://doi.org/10.3389/fmars.2020.588192.s005
genre North Atlantic
genre_facet North Atlantic
op_relation https://figshare.com/articles/dataset/Table_1_Molecular_Systematics_of_the_Long-Snouted_Deep_Water_Dogfish_Centrophoridae_Deania_With_Implications_for_Identification_Taxonomy_and_Conservation_pdf/13615787
doi:10.3389/fmars.2020.588192.s005
op_rights CC BY 4.0
op_rightsnorm CC-BY
op_doi https://doi.org/10.3389/fmars.2020.588192.s005
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