Characterization of a novel RNA virus discovered in the autumnal moth Epirrita autumnata in Sweden
A novel, 10 kb RNA virus-tentatively named 'Abisko virus'-was discovered in the transcriptome data of a diseased autumnal moth (Epirrita autumnata) larva, as part of a search for the possible causes of the cyclical nature and mortality associated with geometrid moth dynamics and outbreaks...
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2017
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Online Access: | https://pub.epsilon.slu.se/14780/ https://pub.epsilon.slu.se/14780/7/de_miranda_j_et_al_171204.pdf https://doi.org/10.3390/v9080214 |
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ftslunivuppsala:oai:pub.epsilon.slu.se:14780 2023-05-15T12:59:12+02:00 Characterization of a novel RNA virus discovered in the autumnal moth Epirrita autumnata in Sweden Rodrigues De Miranda, Joachim Hedman, Harald Onorati, Piero Stephan, Jörg Karlberg, Olof Bylund, Helena Terenius, Olle 2017 application/pdf https://pub.epsilon.slu.se/14780/ https://pub.epsilon.slu.se/14780/7/de_miranda_j_et_al_171204.pdf https://doi.org/10.3390/v9080214 sv eng swe eng https://pub.epsilon.slu.se/14780/7/de_miranda_j_et_al_171204.pdf Rodrigues De Miranda, Joachim and Hedman, Harald and Onorati, Piero and Stephan, Jörg and Karlberg, Olof and Bylund, Helena and Terenius, Olle (2017). Characterization of a novel RNA virus discovered in the autumnal moth Epirrita autumnata in Sweden. Viruses. 9 :8 , 214 [Research article] cc_by_4 CC-BY Microbiology (Microbiology in the medical area to be 30109) Research article PeerReviewed 2017 ftslunivuppsala https://doi.org/10.3390/v9080214 2022-01-09T19:14:23Z A novel, 10 kb RNA virus-tentatively named 'Abisko virus'-was discovered in the transcriptome data of a diseased autumnal moth (Epirrita autumnata) larva, as part of a search for the possible causes of the cyclical nature and mortality associated with geometrid moth dynamics and outbreaks in northern Fennoscandia. Abisko virus has a genome organization similar to that of the insect-infecting negeviruses, but phylogenetic and compositional bias analyses also reveal strong affiliations with plant-infecting viruses, such that both the primary host origin and taxonomic identity of the virus remain in doubt. In an extensive set of larval, pupal, and adult autumnal moth and winter moth (Operophtera brumata) outbreak samples, the virus was only detected in a few adult E. autumnata moths as well as the single larval transcriptome. The Abisko virus is therefore unlikely to be a factor in the Fennoscandia geometrid population dynamics. Article in Journal/Newspaper Abisko Fennoscandia Swedish University of Agricultural Sciences (SLU): Epsilon Open Archive Abisko ENVELOPE(18.829,18.829,68.349,68.349) Viruses 9 8 214 |
institution |
Open Polar |
collection |
Swedish University of Agricultural Sciences (SLU): Epsilon Open Archive |
op_collection_id |
ftslunivuppsala |
language |
Swedish English |
topic |
Microbiology (Microbiology in the medical area to be 30109) |
spellingShingle |
Microbiology (Microbiology in the medical area to be 30109) Rodrigues De Miranda, Joachim Hedman, Harald Onorati, Piero Stephan, Jörg Karlberg, Olof Bylund, Helena Terenius, Olle Characterization of a novel RNA virus discovered in the autumnal moth Epirrita autumnata in Sweden |
topic_facet |
Microbiology (Microbiology in the medical area to be 30109) |
description |
A novel, 10 kb RNA virus-tentatively named 'Abisko virus'-was discovered in the transcriptome data of a diseased autumnal moth (Epirrita autumnata) larva, as part of a search for the possible causes of the cyclical nature and mortality associated with geometrid moth dynamics and outbreaks in northern Fennoscandia. Abisko virus has a genome organization similar to that of the insect-infecting negeviruses, but phylogenetic and compositional bias analyses also reveal strong affiliations with plant-infecting viruses, such that both the primary host origin and taxonomic identity of the virus remain in doubt. In an extensive set of larval, pupal, and adult autumnal moth and winter moth (Operophtera brumata) outbreak samples, the virus was only detected in a few adult E. autumnata moths as well as the single larval transcriptome. The Abisko virus is therefore unlikely to be a factor in the Fennoscandia geometrid population dynamics. |
format |
Article in Journal/Newspaper |
author |
Rodrigues De Miranda, Joachim Hedman, Harald Onorati, Piero Stephan, Jörg Karlberg, Olof Bylund, Helena Terenius, Olle |
author_facet |
Rodrigues De Miranda, Joachim Hedman, Harald Onorati, Piero Stephan, Jörg Karlberg, Olof Bylund, Helena Terenius, Olle |
author_sort |
Rodrigues De Miranda, Joachim |
title |
Characterization of a novel RNA virus discovered in the autumnal moth Epirrita autumnata in Sweden |
title_short |
Characterization of a novel RNA virus discovered in the autumnal moth Epirrita autumnata in Sweden |
title_full |
Characterization of a novel RNA virus discovered in the autumnal moth Epirrita autumnata in Sweden |
title_fullStr |
Characterization of a novel RNA virus discovered in the autumnal moth Epirrita autumnata in Sweden |
title_full_unstemmed |
Characterization of a novel RNA virus discovered in the autumnal moth Epirrita autumnata in Sweden |
title_sort |
characterization of a novel rna virus discovered in the autumnal moth epirrita autumnata in sweden |
publishDate |
2017 |
url |
https://pub.epsilon.slu.se/14780/ https://pub.epsilon.slu.se/14780/7/de_miranda_j_et_al_171204.pdf https://doi.org/10.3390/v9080214 |
long_lat |
ENVELOPE(18.829,18.829,68.349,68.349) |
geographic |
Abisko |
geographic_facet |
Abisko |
genre |
Abisko Fennoscandia |
genre_facet |
Abisko Fennoscandia |
op_relation |
https://pub.epsilon.slu.se/14780/7/de_miranda_j_et_al_171204.pdf Rodrigues De Miranda, Joachim and Hedman, Harald and Onorati, Piero and Stephan, Jörg and Karlberg, Olof and Bylund, Helena and Terenius, Olle (2017). Characterization of a novel RNA virus discovered in the autumnal moth Epirrita autumnata in Sweden. Viruses. 9 :8 , 214 [Research article] |
op_rights |
cc_by_4 |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.3390/v9080214 |
container_title |
Viruses |
container_volume |
9 |
container_issue |
8 |
container_start_page |
214 |
_version_ |
1766367516646440960 |