A biogeographic analysis of the species Fragaria vesca using microsatellite markers on a worldwide plant collection

The woodland strawberry, Fragaria vesca L., has the widest distribution of its genus. It can be found across North-America, all over Europe and into Asia. F. vesca has become an important research model benefitting from its small genome as well as both easy propogation and maintainance. A vast colle...

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Main Author: Hrannar Smári Hilmarsson 1984-
Other Authors: Landbúnaðarháskóli Íslands
Format: Thesis
Language:English
Published: 2015
Subjects:
Online Access:http://hdl.handle.net/1946/23439
id ftskemman:oai:skemman.is:1946/23439
record_format openpolar
spelling ftskemman:oai:skemman.is:1946/23439 2023-05-15T16:52:30+02:00 A biogeographic analysis of the species Fragaria vesca using microsatellite markers on a worldwide plant collection Hrannar Smári Hilmarsson 1984- Landbúnaðarháskóli Íslands 2015-06 application/pdf http://hdl.handle.net/1946/23439 en eng http://hdl.handle.net/1946/23439 Jarðaber Erfðafjölbreytileiki Stofnerfafræði Thesis Master's 2015 ftskemman 2022-12-11T06:57:43Z The woodland strawberry, Fragaria vesca L., has the widest distribution of its genus. It can be found across North-America, all over Europe and into Asia. F. vesca has become an important research model benefitting from its small genome as well as both easy propogation and maintainance. A vast collection and research on natural variation is imperative to the advancement of research in the field of the Rosa (Rosaceae) plant family, the third most economically important of all plant families. Another importat reason for assessing the genetic population structure of the F. vesca is its vast distribution and the effect of climate change through the ages, which could shed light on the dispersal route of the species during and after the last glacial maximum. The aims of this study were to collect individuals of F. vesca representing the entire geographic distribution, assess their genetic diversity and to shed light on the origin of the Icelandic F. vesca population. In this study, a collection of 445 plants were gathered from all corners of the geographical distribution. Of those, 300 plants were analysed using 66 of the 68 microsatellite markers tested. Their mean allele number per locus was 3.94 and the mean polymorphic information content value was 0.13. Ten markers were monomorphic and 13 biallelic. The collection of plants was analysed using Beyasian clustering analysis software BAPS and STRUCTURE. The two methods resulted in contrasting number of clusters for the data. The only corresponding results were the great divergence between the American population and the European. Also it was prominent in both methods that the Icelandic population was a separate cluster in the European populations. The two genetic distance methods used showed that the Icelandic population was closest genetically to the set of cultivars used in this study. Furthermore, the results revealed no population structure in Iceland suggesting recent dispersal and refuting any suggestions of glacial survival. Thesis Iceland Skemman (Iceland)
institution Open Polar
collection Skemman (Iceland)
op_collection_id ftskemman
language English
topic Jarðaber
Erfðafjölbreytileiki
Stofnerfafræði
spellingShingle Jarðaber
Erfðafjölbreytileiki
Stofnerfafræði
Hrannar Smári Hilmarsson 1984-
A biogeographic analysis of the species Fragaria vesca using microsatellite markers on a worldwide plant collection
topic_facet Jarðaber
Erfðafjölbreytileiki
Stofnerfafræði
description The woodland strawberry, Fragaria vesca L., has the widest distribution of its genus. It can be found across North-America, all over Europe and into Asia. F. vesca has become an important research model benefitting from its small genome as well as both easy propogation and maintainance. A vast collection and research on natural variation is imperative to the advancement of research in the field of the Rosa (Rosaceae) plant family, the third most economically important of all plant families. Another importat reason for assessing the genetic population structure of the F. vesca is its vast distribution and the effect of climate change through the ages, which could shed light on the dispersal route of the species during and after the last glacial maximum. The aims of this study were to collect individuals of F. vesca representing the entire geographic distribution, assess their genetic diversity and to shed light on the origin of the Icelandic F. vesca population. In this study, a collection of 445 plants were gathered from all corners of the geographical distribution. Of those, 300 plants were analysed using 66 of the 68 microsatellite markers tested. Their mean allele number per locus was 3.94 and the mean polymorphic information content value was 0.13. Ten markers were monomorphic and 13 biallelic. The collection of plants was analysed using Beyasian clustering analysis software BAPS and STRUCTURE. The two methods resulted in contrasting number of clusters for the data. The only corresponding results were the great divergence between the American population and the European. Also it was prominent in both methods that the Icelandic population was a separate cluster in the European populations. The two genetic distance methods used showed that the Icelandic population was closest genetically to the set of cultivars used in this study. Furthermore, the results revealed no population structure in Iceland suggesting recent dispersal and refuting any suggestions of glacial survival.
author2 Landbúnaðarháskóli Íslands
format Thesis
author Hrannar Smári Hilmarsson 1984-
author_facet Hrannar Smári Hilmarsson 1984-
author_sort Hrannar Smári Hilmarsson 1984-
title A biogeographic analysis of the species Fragaria vesca using microsatellite markers on a worldwide plant collection
title_short A biogeographic analysis of the species Fragaria vesca using microsatellite markers on a worldwide plant collection
title_full A biogeographic analysis of the species Fragaria vesca using microsatellite markers on a worldwide plant collection
title_fullStr A biogeographic analysis of the species Fragaria vesca using microsatellite markers on a worldwide plant collection
title_full_unstemmed A biogeographic analysis of the species Fragaria vesca using microsatellite markers on a worldwide plant collection
title_sort biogeographic analysis of the species fragaria vesca using microsatellite markers on a worldwide plant collection
publishDate 2015
url http://hdl.handle.net/1946/23439
genre Iceland
genre_facet Iceland
op_relation http://hdl.handle.net/1946/23439
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