Evaluation of a semi-nested PCR for detection of Renibacterium salmoninarum in samples from kidney, gill and ovarian fluid of Atlantic salmon broodfish

A semi-nested PCR (snPCR) for detection of Renibacterium salmoninarum that causes bacterial kidney disease (BKD) in salmonids was constructed. The efficacy of the snPCR was evaluated by comparison with nested PCR (nPCR) and two ELISA methods on kidney, ovarian fluid and gill samples collected from A...

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Main Authors: Ívar Örn Árnason 1982-, Sunna Sigurðardóttir 1949-, Árni Kristmundsson 1966-, Vilhjálmur Svansson 1960-, Sigríður Guðmundsdóttir 1950-
Other Authors: Landbúnaðarháskóli Íslands
Format: Article in Journal/Newspaper
Language:English
Published: 2013
Subjects:
Online Access:http://hdl.handle.net/1946/19717
id ftskemman:oai:skemman.is:1946/19717
record_format openpolar
spelling ftskemman:oai:skemman.is:1946/19717 2023-05-15T15:30:57+02:00 Evaluation of a semi-nested PCR for detection of Renibacterium salmoninarum in samples from kidney, gill and ovarian fluid of Atlantic salmon broodfish Ívar Örn Árnason 1982- Sunna Sigurðardóttir 1949- Árni Kristmundsson 1966- Vilhjálmur Svansson 1960- Sigríður Guðmundsdóttir 1950- Landbúnaðarháskóli Íslands 2013 application/pdf http://hdl.handle.net/1946/19717 en eng http://www.ias.is/landbunadur/wgsamvef.nsf/Attachment/Arnason%20et%20al%202013/$file/Arnason%20et%20al%202013.pdf Icelandic agricultural sciences 26, 49-57 1670-567x http://hdl.handle.net/1946/19717 Dýrasjúkdómar Laxaætt Article 2013 ftskemman 2022-12-11T06:58:43Z A semi-nested PCR (snPCR) for detection of Renibacterium salmoninarum that causes bacterial kidney disease (BKD) in salmonids was constructed. The efficacy of the snPCR was evaluated by comparison with nested PCR (nPCR) and two ELISA methods on kidney, ovarian fluid and gill samples collected from Atlantic salmon broodfish with escalating disease. The PCR methods using a conventional isolation kit identified equal numbers of positive samples, or 30%, with acceptable agreement. The ratio of positive kidney samples in PCR increased significantly, 42.5% in snPCR and 45% in nPCR, when an FTA minicard was used for DNA isolation. ELISA, using polyclonal antibodies, detected the highest number of positive samples (65%) and ELISA using monoclonal antibodies the lowest (17.5%). Ovarian fluid and gills gave inadequate results and cannot replace kidney samples for determination of R. salmoninarum infection in Atlantic salmon broodfish. Semi-nested PCR (snPCR) aðferð var þróuð til greiningar á nýrnaveikibakteríunni Renibacterium salmoninarum. Greiningargeta snPCR prófsins í nýrna-, tálkna- og hrognavökvasýnum var metin út frá samanburði við nested PCR (nPCR) og tvær ELISA aðferðir í Atlantshafsklaklöxum með virka sýkingu. PCR aðferðirnar greindu sama hlutfall af jákvæðum sýnum með hefðbundinni DNA einangrunaraðferð, eða 30%, með góðu innbyrðis samræmi. Einangrun DNA á FTA pappír stuðlaði að greiningu marktækt fleiri jákvæðra sýna, 42.5% fyrir snPCR og 45% fyrir nPCR. Fjölstofna ELISA aðferð (pELISA) greindi flest jákvæð sýni (65%), en einstofna aðferðin (mELISA) fæst (17.5%). Tálkn og hrognavökvi henta ekki til skimunar á R. Salmoninarum í laxi. Article in Journal/Newspaper Atlantic salmon Skemman (Iceland)
institution Open Polar
collection Skemman (Iceland)
op_collection_id ftskemman
language English
topic Dýrasjúkdómar
Laxaætt
spellingShingle Dýrasjúkdómar
Laxaætt
Ívar Örn Árnason 1982-
Sunna Sigurðardóttir 1949-
Árni Kristmundsson 1966-
Vilhjálmur Svansson 1960-
Sigríður Guðmundsdóttir 1950-
Evaluation of a semi-nested PCR for detection of Renibacterium salmoninarum in samples from kidney, gill and ovarian fluid of Atlantic salmon broodfish
topic_facet Dýrasjúkdómar
Laxaætt
description A semi-nested PCR (snPCR) for detection of Renibacterium salmoninarum that causes bacterial kidney disease (BKD) in salmonids was constructed. The efficacy of the snPCR was evaluated by comparison with nested PCR (nPCR) and two ELISA methods on kidney, ovarian fluid and gill samples collected from Atlantic salmon broodfish with escalating disease. The PCR methods using a conventional isolation kit identified equal numbers of positive samples, or 30%, with acceptable agreement. The ratio of positive kidney samples in PCR increased significantly, 42.5% in snPCR and 45% in nPCR, when an FTA minicard was used for DNA isolation. ELISA, using polyclonal antibodies, detected the highest number of positive samples (65%) and ELISA using monoclonal antibodies the lowest (17.5%). Ovarian fluid and gills gave inadequate results and cannot replace kidney samples for determination of R. salmoninarum infection in Atlantic salmon broodfish. Semi-nested PCR (snPCR) aðferð var þróuð til greiningar á nýrnaveikibakteríunni Renibacterium salmoninarum. Greiningargeta snPCR prófsins í nýrna-, tálkna- og hrognavökvasýnum var metin út frá samanburði við nested PCR (nPCR) og tvær ELISA aðferðir í Atlantshafsklaklöxum með virka sýkingu. PCR aðferðirnar greindu sama hlutfall af jákvæðum sýnum með hefðbundinni DNA einangrunaraðferð, eða 30%, með góðu innbyrðis samræmi. Einangrun DNA á FTA pappír stuðlaði að greiningu marktækt fleiri jákvæðra sýna, 42.5% fyrir snPCR og 45% fyrir nPCR. Fjölstofna ELISA aðferð (pELISA) greindi flest jákvæð sýni (65%), en einstofna aðferðin (mELISA) fæst (17.5%). Tálkn og hrognavökvi henta ekki til skimunar á R. Salmoninarum í laxi.
author2 Landbúnaðarháskóli Íslands
format Article in Journal/Newspaper
author Ívar Örn Árnason 1982-
Sunna Sigurðardóttir 1949-
Árni Kristmundsson 1966-
Vilhjálmur Svansson 1960-
Sigríður Guðmundsdóttir 1950-
author_facet Ívar Örn Árnason 1982-
Sunna Sigurðardóttir 1949-
Árni Kristmundsson 1966-
Vilhjálmur Svansson 1960-
Sigríður Guðmundsdóttir 1950-
author_sort Ívar Örn Árnason 1982-
title Evaluation of a semi-nested PCR for detection of Renibacterium salmoninarum in samples from kidney, gill and ovarian fluid of Atlantic salmon broodfish
title_short Evaluation of a semi-nested PCR for detection of Renibacterium salmoninarum in samples from kidney, gill and ovarian fluid of Atlantic salmon broodfish
title_full Evaluation of a semi-nested PCR for detection of Renibacterium salmoninarum in samples from kidney, gill and ovarian fluid of Atlantic salmon broodfish
title_fullStr Evaluation of a semi-nested PCR for detection of Renibacterium salmoninarum in samples from kidney, gill and ovarian fluid of Atlantic salmon broodfish
title_full_unstemmed Evaluation of a semi-nested PCR for detection of Renibacterium salmoninarum in samples from kidney, gill and ovarian fluid of Atlantic salmon broodfish
title_sort evaluation of a semi-nested pcr for detection of renibacterium salmoninarum in samples from kidney, gill and ovarian fluid of atlantic salmon broodfish
publishDate 2013
url http://hdl.handle.net/1946/19717
genre Atlantic salmon
genre_facet Atlantic salmon
op_relation http://www.ias.is/landbunadur/wgsamvef.nsf/Attachment/Arnason%20et%20al%202013/$file/Arnason%20et%20al%202013.pdf
Icelandic agricultural sciences 26, 49-57
1670-567x
http://hdl.handle.net/1946/19717
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