First report of the photosynthetic dinoflagellate Heterocapsa minima in the Pacific Ocean: morphological and genetic characterizations and the nationwide distribution in Korea
The genus Heterocapsa is one of the major dinoflagellate groups, with some of its species having worldwide distributions. However, prior to the present study, the phototrophic species Heterocapsa minima has been reported only from the northeast Atlantic Ocean. Recently, H. minima was found in the Ko...
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한국조류학회I
2020
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Online Access: | https://hdl.handle.net/10371/192640 https://doi.org/10.4490/algae.2019.34.2.28 |
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ftseoulnuniv:oai:s-space.snu.ac.kr:10371/192640 2023-07-02T03:33:12+02:00 First report of the photosynthetic dinoflagellate Heterocapsa minima in the Pacific Ocean: morphological and genetic characterizations and the nationwide distribution in Korea Lee, Sung Yeon Jeong, Hae Jin Kwon, Ji Eun You, Ji Hyun Kim, So Jin Ok, Jin Hee Kang, Hee Chang Park, Jae Yeon Jeong, Hae Jin 2020-04-10 https://hdl.handle.net/10371/192640 https://doi.org/10.4490/algae.2019.34.2.28 영어 unknown 한국조류학회I ALGAE, Vol.34 No.1, pp.7-21 1226-2617 https://hdl.handle.net/10371/192640 doi:10.4490/algae.2019.34.2.28 000461948400002 2-s2.0-85067418291 95627 ART002452568 SP-NOV PERIDINIALES RED-TIDE ORGANISMS COCHLODINIUM-POLYKRIKOIDES DINOPHYCEAE IDENTIFICATION GROWTH MIXOTROPHY CIRCULARISQUAMA PICOPLANKTON NANOPLANKTON DNA Peridiniales qPCR salinity specific primer taxonomy temperature Article ART 2020 ftseoulnuniv https://doi.org/10.4490/algae.2019.34.2.28 2023-06-09T00:37:01Z The genus Heterocapsa is one of the major dinoflagellate groups, with some of its species having worldwide distributions. However, prior to the present study, the phototrophic species Heterocapsa minima has been reported only from the northeast Atlantic Ocean. Recently, H. minima was found in the Korean waters, and a clonal culture was established. This culture was used to examine the morphology of the Korean strain H. minima HMMJ1604 through light and scanning electron microscopy, as well as for its genetic characterization. Furthermore, to determine the nationwide distribution of H. minima in Korea, its abundance was quantified in the waters of 28 stations in all four seasons in 2016-2018 using the quantitative real-time polymerase chain reaction method. The overall morphology of H. minima HMMJ1604 was very similar to that of the Irish strain H. minima JK2. However, the Korean strain had five pores around the pore plate, whereas the Irish strain had six pores. When properly aligned, the sequences of the large subunit and internal transcribed spacer regions of the ribosomal DNA of the Korean strain were identical to those of the Irish strain. This species was detected in the waters of 26 out of 28 stations, but its abundance was greater than 1.0 cells mL(-1) at 8 stations. The highest abundance of H. minima was 44.4 cells mL(-1). Although this species was found in all seasons, its abundance was greater than 1.0 cells mL(-1) when the water temperature and salinity were 10.9-25.0 degrees C and 17.5-34.1, respectively. To the best knowledge, the present study reported for the first time that II. minima lives in the Pacific Ocean and is widely distributed in the Korean waters. Y 1 Article in Journal/Newspaper Northeast Atlantic Seoul National University: S-Space Pacific ALGAE 34 1 7 21 |
institution |
Open Polar |
collection |
Seoul National University: S-Space |
op_collection_id |
ftseoulnuniv |
language |
unknown |
topic |
SP-NOV PERIDINIALES RED-TIDE ORGANISMS COCHLODINIUM-POLYKRIKOIDES DINOPHYCEAE IDENTIFICATION GROWTH MIXOTROPHY CIRCULARISQUAMA PICOPLANKTON NANOPLANKTON DNA Peridiniales qPCR salinity specific primer taxonomy temperature |
spellingShingle |
SP-NOV PERIDINIALES RED-TIDE ORGANISMS COCHLODINIUM-POLYKRIKOIDES DINOPHYCEAE IDENTIFICATION GROWTH MIXOTROPHY CIRCULARISQUAMA PICOPLANKTON NANOPLANKTON DNA Peridiniales qPCR salinity specific primer taxonomy temperature Lee, Sung Yeon Jeong, Hae Jin Kwon, Ji Eun You, Ji Hyun Kim, So Jin Ok, Jin Hee Kang, Hee Chang Park, Jae Yeon First report of the photosynthetic dinoflagellate Heterocapsa minima in the Pacific Ocean: morphological and genetic characterizations and the nationwide distribution in Korea |
topic_facet |
SP-NOV PERIDINIALES RED-TIDE ORGANISMS COCHLODINIUM-POLYKRIKOIDES DINOPHYCEAE IDENTIFICATION GROWTH MIXOTROPHY CIRCULARISQUAMA PICOPLANKTON NANOPLANKTON DNA Peridiniales qPCR salinity specific primer taxonomy temperature |
description |
The genus Heterocapsa is one of the major dinoflagellate groups, with some of its species having worldwide distributions. However, prior to the present study, the phototrophic species Heterocapsa minima has been reported only from the northeast Atlantic Ocean. Recently, H. minima was found in the Korean waters, and a clonal culture was established. This culture was used to examine the morphology of the Korean strain H. minima HMMJ1604 through light and scanning electron microscopy, as well as for its genetic characterization. Furthermore, to determine the nationwide distribution of H. minima in Korea, its abundance was quantified in the waters of 28 stations in all four seasons in 2016-2018 using the quantitative real-time polymerase chain reaction method. The overall morphology of H. minima HMMJ1604 was very similar to that of the Irish strain H. minima JK2. However, the Korean strain had five pores around the pore plate, whereas the Irish strain had six pores. When properly aligned, the sequences of the large subunit and internal transcribed spacer regions of the ribosomal DNA of the Korean strain were identical to those of the Irish strain. This species was detected in the waters of 26 out of 28 stations, but its abundance was greater than 1.0 cells mL(-1) at 8 stations. The highest abundance of H. minima was 44.4 cells mL(-1). Although this species was found in all seasons, its abundance was greater than 1.0 cells mL(-1) when the water temperature and salinity were 10.9-25.0 degrees C and 17.5-34.1, respectively. To the best knowledge, the present study reported for the first time that II. minima lives in the Pacific Ocean and is widely distributed in the Korean waters. Y 1 |
author2 |
Jeong, Hae Jin |
format |
Article in Journal/Newspaper |
author |
Lee, Sung Yeon Jeong, Hae Jin Kwon, Ji Eun You, Ji Hyun Kim, So Jin Ok, Jin Hee Kang, Hee Chang Park, Jae Yeon |
author_facet |
Lee, Sung Yeon Jeong, Hae Jin Kwon, Ji Eun You, Ji Hyun Kim, So Jin Ok, Jin Hee Kang, Hee Chang Park, Jae Yeon |
author_sort |
Lee, Sung Yeon |
title |
First report of the photosynthetic dinoflagellate Heterocapsa minima in the Pacific Ocean: morphological and genetic characterizations and the nationwide distribution in Korea |
title_short |
First report of the photosynthetic dinoflagellate Heterocapsa minima in the Pacific Ocean: morphological and genetic characterizations and the nationwide distribution in Korea |
title_full |
First report of the photosynthetic dinoflagellate Heterocapsa minima in the Pacific Ocean: morphological and genetic characterizations and the nationwide distribution in Korea |
title_fullStr |
First report of the photosynthetic dinoflagellate Heterocapsa minima in the Pacific Ocean: morphological and genetic characterizations and the nationwide distribution in Korea |
title_full_unstemmed |
First report of the photosynthetic dinoflagellate Heterocapsa minima in the Pacific Ocean: morphological and genetic characterizations and the nationwide distribution in Korea |
title_sort |
first report of the photosynthetic dinoflagellate heterocapsa minima in the pacific ocean: morphological and genetic characterizations and the nationwide distribution in korea |
publisher |
한국조류학회I |
publishDate |
2020 |
url |
https://hdl.handle.net/10371/192640 https://doi.org/10.4490/algae.2019.34.2.28 |
geographic |
Pacific |
geographic_facet |
Pacific |
genre |
Northeast Atlantic |
genre_facet |
Northeast Atlantic |
op_relation |
ALGAE, Vol.34 No.1, pp.7-21 1226-2617 https://hdl.handle.net/10371/192640 doi:10.4490/algae.2019.34.2.28 000461948400002 2-s2.0-85067418291 95627 ART002452568 |
op_doi |
https://doi.org/10.4490/algae.2019.34.2.28 |
container_title |
ALGAE |
container_volume |
34 |
container_issue |
1 |
container_start_page |
7 |
op_container_end_page |
21 |
_version_ |
1770273059375153152 |