First report of the photosynthetic dinoflagellate Heterocapsa minima in the Pacific Ocean: morphological and genetic characterizations and the nationwide distribution in Korea

The genus Heterocapsa is one of the major dinoflagellate groups, with some of its species having worldwide distributions. However, prior to the present study, the phototrophic species Heterocapsa minima has been reported only from the northeast Atlantic Ocean. Recently, H. minima was found in the Ko...

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Published in:ALGAE
Main Authors: Lee, Sung Yeon, Jeong, Hae Jin, Kwon, Ji Eun, You, Ji Hyun, Kim, So Jin, Ok, Jin Hee, Kang, Hee Chang, Park, Jae Yeon
Format: Article in Journal/Newspaper
Language:unknown
Published: 한국조류학회I 2020
Subjects:
DNA
Online Access:https://hdl.handle.net/10371/192640
https://doi.org/10.4490/algae.2019.34.2.28
id ftseoulnuniv:oai:s-space.snu.ac.kr:10371/192640
record_format openpolar
spelling ftseoulnuniv:oai:s-space.snu.ac.kr:10371/192640 2023-07-02T03:33:12+02:00 First report of the photosynthetic dinoflagellate Heterocapsa minima in the Pacific Ocean: morphological and genetic characterizations and the nationwide distribution in Korea Lee, Sung Yeon Jeong, Hae Jin Kwon, Ji Eun You, Ji Hyun Kim, So Jin Ok, Jin Hee Kang, Hee Chang Park, Jae Yeon Jeong, Hae Jin 2020-04-10 https://hdl.handle.net/10371/192640 https://doi.org/10.4490/algae.2019.34.2.28 영어 unknown 한국조류학회I ALGAE, Vol.34 No.1, pp.7-21 1226-2617 https://hdl.handle.net/10371/192640 doi:10.4490/algae.2019.34.2.28 000461948400002 2-s2.0-85067418291 95627 ART002452568 SP-NOV PERIDINIALES RED-TIDE ORGANISMS COCHLODINIUM-POLYKRIKOIDES DINOPHYCEAE IDENTIFICATION GROWTH MIXOTROPHY CIRCULARISQUAMA PICOPLANKTON NANOPLANKTON DNA Peridiniales qPCR salinity specific primer taxonomy temperature Article ART 2020 ftseoulnuniv https://doi.org/10.4490/algae.2019.34.2.28 2023-06-09T00:37:01Z The genus Heterocapsa is one of the major dinoflagellate groups, with some of its species having worldwide distributions. However, prior to the present study, the phototrophic species Heterocapsa minima has been reported only from the northeast Atlantic Ocean. Recently, H. minima was found in the Korean waters, and a clonal culture was established. This culture was used to examine the morphology of the Korean strain H. minima HMMJ1604 through light and scanning electron microscopy, as well as for its genetic characterization. Furthermore, to determine the nationwide distribution of H. minima in Korea, its abundance was quantified in the waters of 28 stations in all four seasons in 2016-2018 using the quantitative real-time polymerase chain reaction method. The overall morphology of H. minima HMMJ1604 was very similar to that of the Irish strain H. minima JK2. However, the Korean strain had five pores around the pore plate, whereas the Irish strain had six pores. When properly aligned, the sequences of the large subunit and internal transcribed spacer regions of the ribosomal DNA of the Korean strain were identical to those of the Irish strain. This species was detected in the waters of 26 out of 28 stations, but its abundance was greater than 1.0 cells mL(-1) at 8 stations. The highest abundance of H. minima was 44.4 cells mL(-1). Although this species was found in all seasons, its abundance was greater than 1.0 cells mL(-1) when the water temperature and salinity were 10.9-25.0 degrees C and 17.5-34.1, respectively. To the best knowledge, the present study reported for the first time that II. minima lives in the Pacific Ocean and is widely distributed in the Korean waters. Y 1 Article in Journal/Newspaper Northeast Atlantic Seoul National University: S-Space Pacific ALGAE 34 1 7 21
institution Open Polar
collection Seoul National University: S-Space
op_collection_id ftseoulnuniv
language unknown
topic SP-NOV PERIDINIALES
RED-TIDE ORGANISMS
COCHLODINIUM-POLYKRIKOIDES
DINOPHYCEAE
IDENTIFICATION
GROWTH
MIXOTROPHY
CIRCULARISQUAMA
PICOPLANKTON
NANOPLANKTON
DNA
Peridiniales
qPCR
salinity
specific primer
taxonomy
temperature
spellingShingle SP-NOV PERIDINIALES
RED-TIDE ORGANISMS
COCHLODINIUM-POLYKRIKOIDES
DINOPHYCEAE
IDENTIFICATION
GROWTH
MIXOTROPHY
CIRCULARISQUAMA
PICOPLANKTON
NANOPLANKTON
DNA
Peridiniales
qPCR
salinity
specific primer
taxonomy
temperature
Lee, Sung Yeon
Jeong, Hae Jin
Kwon, Ji Eun
You, Ji Hyun
Kim, So Jin
Ok, Jin Hee
Kang, Hee Chang
Park, Jae Yeon
First report of the photosynthetic dinoflagellate Heterocapsa minima in the Pacific Ocean: morphological and genetic characterizations and the nationwide distribution in Korea
topic_facet SP-NOV PERIDINIALES
RED-TIDE ORGANISMS
COCHLODINIUM-POLYKRIKOIDES
DINOPHYCEAE
IDENTIFICATION
GROWTH
MIXOTROPHY
CIRCULARISQUAMA
PICOPLANKTON
NANOPLANKTON
DNA
Peridiniales
qPCR
salinity
specific primer
taxonomy
temperature
description The genus Heterocapsa is one of the major dinoflagellate groups, with some of its species having worldwide distributions. However, prior to the present study, the phototrophic species Heterocapsa minima has been reported only from the northeast Atlantic Ocean. Recently, H. minima was found in the Korean waters, and a clonal culture was established. This culture was used to examine the morphology of the Korean strain H. minima HMMJ1604 through light and scanning electron microscopy, as well as for its genetic characterization. Furthermore, to determine the nationwide distribution of H. minima in Korea, its abundance was quantified in the waters of 28 stations in all four seasons in 2016-2018 using the quantitative real-time polymerase chain reaction method. The overall morphology of H. minima HMMJ1604 was very similar to that of the Irish strain H. minima JK2. However, the Korean strain had five pores around the pore plate, whereas the Irish strain had six pores. When properly aligned, the sequences of the large subunit and internal transcribed spacer regions of the ribosomal DNA of the Korean strain were identical to those of the Irish strain. This species was detected in the waters of 26 out of 28 stations, but its abundance was greater than 1.0 cells mL(-1) at 8 stations. The highest abundance of H. minima was 44.4 cells mL(-1). Although this species was found in all seasons, its abundance was greater than 1.0 cells mL(-1) when the water temperature and salinity were 10.9-25.0 degrees C and 17.5-34.1, respectively. To the best knowledge, the present study reported for the first time that II. minima lives in the Pacific Ocean and is widely distributed in the Korean waters. Y 1
author2 Jeong, Hae Jin
format Article in Journal/Newspaper
author Lee, Sung Yeon
Jeong, Hae Jin
Kwon, Ji Eun
You, Ji Hyun
Kim, So Jin
Ok, Jin Hee
Kang, Hee Chang
Park, Jae Yeon
author_facet Lee, Sung Yeon
Jeong, Hae Jin
Kwon, Ji Eun
You, Ji Hyun
Kim, So Jin
Ok, Jin Hee
Kang, Hee Chang
Park, Jae Yeon
author_sort Lee, Sung Yeon
title First report of the photosynthetic dinoflagellate Heterocapsa minima in the Pacific Ocean: morphological and genetic characterizations and the nationwide distribution in Korea
title_short First report of the photosynthetic dinoflagellate Heterocapsa minima in the Pacific Ocean: morphological and genetic characterizations and the nationwide distribution in Korea
title_full First report of the photosynthetic dinoflagellate Heterocapsa minima in the Pacific Ocean: morphological and genetic characterizations and the nationwide distribution in Korea
title_fullStr First report of the photosynthetic dinoflagellate Heterocapsa minima in the Pacific Ocean: morphological and genetic characterizations and the nationwide distribution in Korea
title_full_unstemmed First report of the photosynthetic dinoflagellate Heterocapsa minima in the Pacific Ocean: morphological and genetic characterizations and the nationwide distribution in Korea
title_sort first report of the photosynthetic dinoflagellate heterocapsa minima in the pacific ocean: morphological and genetic characterizations and the nationwide distribution in korea
publisher 한국조류학회I
publishDate 2020
url https://hdl.handle.net/10371/192640
https://doi.org/10.4490/algae.2019.34.2.28
geographic Pacific
geographic_facet Pacific
genre Northeast Atlantic
genre_facet Northeast Atlantic
op_relation ALGAE, Vol.34 No.1, pp.7-21
1226-2617
https://hdl.handle.net/10371/192640
doi:10.4490/algae.2019.34.2.28
000461948400002
2-s2.0-85067418291
95627
ART002452568
op_doi https://doi.org/10.4490/algae.2019.34.2.28
container_title ALGAE
container_volume 34
container_issue 1
container_start_page 7
op_container_end_page 21
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