Partial raw data: sea water carbonate system after years of transgenerational exposure to ocean acidification in the European Sea Bass Dicentrarchus labrax

This data set is linked to a study that sought to investigate the impacts of long-term ocean acidification on the olfactory rosette transcriptome of the European sea bass (Dicentrarchus labrax) and on viral resistance. We exposed two generations of the D. labrax to end-of-century predicted pH levels...

Full description

Bibliographic Details
Main Authors: Cohen-rengifo, Mishal, Mouchel, Olivier, Collet, Sophie, Cominassi, Louise, Howald, Sarah, Crespel, Amélie, Cabon, Cabon, Danion, Morgane, Mazurais, David
Format: Dataset
Language:unknown
Published: SEANOE 2022
Subjects:
Online Access:https://doi.org/10.17882/87395
https://www.seanoe.org/data/00762/87395/
id ftseanoe:oai:seanoe.org:87395
record_format openpolar
spelling ftseanoe:oai:seanoe.org:87395 2023-08-27T04:11:19+02:00 Partial raw data: sea water carbonate system after years of transgenerational exposure to ocean acidification in the European Sea Bass Dicentrarchus labrax Cohen-rengifo, Mishal Mouchel, Olivier Collet, Sophie Cominassi, Louise Howald, Sarah Crespel, Amélie Cabon, Cabon Danion, Morgane Mazurais, David North 48.35, South 48.35, East -4.56, West -4.56 2022-04 https://doi.org/10.17882/87395 https://www.seanoe.org/data/00762/87395/ unknown SEANOE doi:10.17882/87395 https://doi.org/10.17882/87395 https://www.seanoe.org/data/00762/87395/ CC-BY raw data carbonate system parameters physico-chemical parameters transgenerational ocean acidification viral challenge dataset 2022 ftseanoe https://doi.org/10.17882/87395 2023-08-09T16:24:02Z This data set is linked to a study that sought to investigate the impacts of long-term ocean acidification on the olfactory rosette transcriptome of the European sea bass (Dicentrarchus labrax) and on viral resistance. We exposed two generations of the D. labrax to end-of-century predicted pH levels (IPCC RCP8.5), with parents being exposed for 53 months (F1) and their offspring for 18 months (F2). Our design included a transcriptomic analysis of the olfactory rosette (collected from the F2) and a viral challenge (exposing F2 to betanodavirus) where we assessed survival rates. This data set contains physico-chemical parameters of the rearing sea water including the carbonate system components as well as survival data and temperature measurements during the viral challenge. The rearing periods extends as follows: F1 parents: 24 October 2013 - 26 March 2018; in duplica tanks per treatment F2 eggs phase: 27 March 2018 - 31 March 2018; in a simplica per treatment F2 larval phase: 1 April 2018 – 1 June 2018; in triplica tanks per treatment F2 juvenile phase: 2 April 2018 – 17 October 2019; in a duplica per treatment However, since this study extends over 7 years, some data is not available in digital form but in paper form. Therefore, here we provide digitalized data for the following periods. F1 parents: 8 February 2016 - 6 March 2018; monthly data showing physico-chemical and carbonate parameters of the sea water F2 eggs phase: 27 March 2018 - 31 March 2018; daily data showing the pH and temperature of the sea water F2 larval phase: 1 April 2018 – 1 June 2018; monthly data showing physico-chemical and carbonate parameters of the sea water and daily data showing the pH and temperature of the sea water F2 juvenile phase: 2 April 2018 – 24 October 2018; daily data showing the pH and temperature of the sea water F2 juvenile phase: 2 April 2018 – 11 February 2019; monthly data showing physico-chemical and carbonate parameters of the sea water pH in NIST scale and temperature were daily measured with a WTW 3110 pH meter ... Dataset Ocean acidification SEANOE (Sea scientific open data publication)
institution Open Polar
collection SEANOE (Sea scientific open data publication)
op_collection_id ftseanoe
language unknown
topic raw data
carbonate system parameters
physico-chemical parameters
transgenerational ocean acidification
viral challenge
spellingShingle raw data
carbonate system parameters
physico-chemical parameters
transgenerational ocean acidification
viral challenge
Cohen-rengifo, Mishal
Mouchel, Olivier
Collet, Sophie
Cominassi, Louise
Howald, Sarah
Crespel, Amélie
Cabon, Cabon
Danion, Morgane
Mazurais, David
Partial raw data: sea water carbonate system after years of transgenerational exposure to ocean acidification in the European Sea Bass Dicentrarchus labrax
topic_facet raw data
carbonate system parameters
physico-chemical parameters
transgenerational ocean acidification
viral challenge
description This data set is linked to a study that sought to investigate the impacts of long-term ocean acidification on the olfactory rosette transcriptome of the European sea bass (Dicentrarchus labrax) and on viral resistance. We exposed two generations of the D. labrax to end-of-century predicted pH levels (IPCC RCP8.5), with parents being exposed for 53 months (F1) and their offspring for 18 months (F2). Our design included a transcriptomic analysis of the olfactory rosette (collected from the F2) and a viral challenge (exposing F2 to betanodavirus) where we assessed survival rates. This data set contains physico-chemical parameters of the rearing sea water including the carbonate system components as well as survival data and temperature measurements during the viral challenge. The rearing periods extends as follows: F1 parents: 24 October 2013 - 26 March 2018; in duplica tanks per treatment F2 eggs phase: 27 March 2018 - 31 March 2018; in a simplica per treatment F2 larval phase: 1 April 2018 – 1 June 2018; in triplica tanks per treatment F2 juvenile phase: 2 April 2018 – 17 October 2019; in a duplica per treatment However, since this study extends over 7 years, some data is not available in digital form but in paper form. Therefore, here we provide digitalized data for the following periods. F1 parents: 8 February 2016 - 6 March 2018; monthly data showing physico-chemical and carbonate parameters of the sea water F2 eggs phase: 27 March 2018 - 31 March 2018; daily data showing the pH and temperature of the sea water F2 larval phase: 1 April 2018 – 1 June 2018; monthly data showing physico-chemical and carbonate parameters of the sea water and daily data showing the pH and temperature of the sea water F2 juvenile phase: 2 April 2018 – 24 October 2018; daily data showing the pH and temperature of the sea water F2 juvenile phase: 2 April 2018 – 11 February 2019; monthly data showing physico-chemical and carbonate parameters of the sea water pH in NIST scale and temperature were daily measured with a WTW 3110 pH meter ...
format Dataset
author Cohen-rengifo, Mishal
Mouchel, Olivier
Collet, Sophie
Cominassi, Louise
Howald, Sarah
Crespel, Amélie
Cabon, Cabon
Danion, Morgane
Mazurais, David
author_facet Cohen-rengifo, Mishal
Mouchel, Olivier
Collet, Sophie
Cominassi, Louise
Howald, Sarah
Crespel, Amélie
Cabon, Cabon
Danion, Morgane
Mazurais, David
author_sort Cohen-rengifo, Mishal
title Partial raw data: sea water carbonate system after years of transgenerational exposure to ocean acidification in the European Sea Bass Dicentrarchus labrax
title_short Partial raw data: sea water carbonate system after years of transgenerational exposure to ocean acidification in the European Sea Bass Dicentrarchus labrax
title_full Partial raw data: sea water carbonate system after years of transgenerational exposure to ocean acidification in the European Sea Bass Dicentrarchus labrax
title_fullStr Partial raw data: sea water carbonate system after years of transgenerational exposure to ocean acidification in the European Sea Bass Dicentrarchus labrax
title_full_unstemmed Partial raw data: sea water carbonate system after years of transgenerational exposure to ocean acidification in the European Sea Bass Dicentrarchus labrax
title_sort partial raw data: sea water carbonate system after years of transgenerational exposure to ocean acidification in the european sea bass dicentrarchus labrax
publisher SEANOE
publishDate 2022
url https://doi.org/10.17882/87395
https://www.seanoe.org/data/00762/87395/
op_coverage North 48.35, South 48.35, East -4.56, West -4.56
genre Ocean acidification
genre_facet Ocean acidification
op_relation doi:10.17882/87395
https://doi.org/10.17882/87395
https://www.seanoe.org/data/00762/87395/
op_rights CC-BY
op_doi https://doi.org/10.17882/87395
_version_ 1775354008050860032