Partial raw data: sea water carbonate system after years of transgenerational exposure to ocean acidification in the European Sea Bass Dicentrarchus labrax
This data set is linked to a study that sought to investigate the impacts of long-term ocean acidification on the olfactory rosette transcriptome of the European sea bass (Dicentrarchus labrax) and on viral resistance. We exposed two generations of the D. labrax to end-of-century predicted pH levels...
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ftseanoe:oai:seanoe.org:87395 2023-08-27T04:11:19+02:00 Partial raw data: sea water carbonate system after years of transgenerational exposure to ocean acidification in the European Sea Bass Dicentrarchus labrax Cohen-rengifo, Mishal Mouchel, Olivier Collet, Sophie Cominassi, Louise Howald, Sarah Crespel, Amélie Cabon, Cabon Danion, Morgane Mazurais, David North 48.35, South 48.35, East -4.56, West -4.56 2022-04 https://doi.org/10.17882/87395 https://www.seanoe.org/data/00762/87395/ unknown SEANOE doi:10.17882/87395 https://doi.org/10.17882/87395 https://www.seanoe.org/data/00762/87395/ CC-BY raw data carbonate system parameters physico-chemical parameters transgenerational ocean acidification viral challenge dataset 2022 ftseanoe https://doi.org/10.17882/87395 2023-08-09T16:24:02Z This data set is linked to a study that sought to investigate the impacts of long-term ocean acidification on the olfactory rosette transcriptome of the European sea bass (Dicentrarchus labrax) and on viral resistance. We exposed two generations of the D. labrax to end-of-century predicted pH levels (IPCC RCP8.5), with parents being exposed for 53 months (F1) and their offspring for 18 months (F2). Our design included a transcriptomic analysis of the olfactory rosette (collected from the F2) and a viral challenge (exposing F2 to betanodavirus) where we assessed survival rates. This data set contains physico-chemical parameters of the rearing sea water including the carbonate system components as well as survival data and temperature measurements during the viral challenge. The rearing periods extends as follows: F1 parents: 24 October 2013 - 26 March 2018; in duplica tanks per treatment F2 eggs phase: 27 March 2018 - 31 March 2018; in a simplica per treatment F2 larval phase: 1 April 2018 – 1 June 2018; in triplica tanks per treatment F2 juvenile phase: 2 April 2018 – 17 October 2019; in a duplica per treatment However, since this study extends over 7 years, some data is not available in digital form but in paper form. Therefore, here we provide digitalized data for the following periods. F1 parents: 8 February 2016 - 6 March 2018; monthly data showing physico-chemical and carbonate parameters of the sea water F2 eggs phase: 27 March 2018 - 31 March 2018; daily data showing the pH and temperature of the sea water F2 larval phase: 1 April 2018 – 1 June 2018; monthly data showing physico-chemical and carbonate parameters of the sea water and daily data showing the pH and temperature of the sea water F2 juvenile phase: 2 April 2018 – 24 October 2018; daily data showing the pH and temperature of the sea water F2 juvenile phase: 2 April 2018 – 11 February 2019; monthly data showing physico-chemical and carbonate parameters of the sea water pH in NIST scale and temperature were daily measured with a WTW 3110 pH meter ... Dataset Ocean acidification SEANOE (Sea scientific open data publication) |
institution |
Open Polar |
collection |
SEANOE (Sea scientific open data publication) |
op_collection_id |
ftseanoe |
language |
unknown |
topic |
raw data carbonate system parameters physico-chemical parameters transgenerational ocean acidification viral challenge |
spellingShingle |
raw data carbonate system parameters physico-chemical parameters transgenerational ocean acidification viral challenge Cohen-rengifo, Mishal Mouchel, Olivier Collet, Sophie Cominassi, Louise Howald, Sarah Crespel, Amélie Cabon, Cabon Danion, Morgane Mazurais, David Partial raw data: sea water carbonate system after years of transgenerational exposure to ocean acidification in the European Sea Bass Dicentrarchus labrax |
topic_facet |
raw data carbonate system parameters physico-chemical parameters transgenerational ocean acidification viral challenge |
description |
This data set is linked to a study that sought to investigate the impacts of long-term ocean acidification on the olfactory rosette transcriptome of the European sea bass (Dicentrarchus labrax) and on viral resistance. We exposed two generations of the D. labrax to end-of-century predicted pH levels (IPCC RCP8.5), with parents being exposed for 53 months (F1) and their offspring for 18 months (F2). Our design included a transcriptomic analysis of the olfactory rosette (collected from the F2) and a viral challenge (exposing F2 to betanodavirus) where we assessed survival rates. This data set contains physico-chemical parameters of the rearing sea water including the carbonate system components as well as survival data and temperature measurements during the viral challenge. The rearing periods extends as follows: F1 parents: 24 October 2013 - 26 March 2018; in duplica tanks per treatment F2 eggs phase: 27 March 2018 - 31 March 2018; in a simplica per treatment F2 larval phase: 1 April 2018 – 1 June 2018; in triplica tanks per treatment F2 juvenile phase: 2 April 2018 – 17 October 2019; in a duplica per treatment However, since this study extends over 7 years, some data is not available in digital form but in paper form. Therefore, here we provide digitalized data for the following periods. F1 parents: 8 February 2016 - 6 March 2018; monthly data showing physico-chemical and carbonate parameters of the sea water F2 eggs phase: 27 March 2018 - 31 March 2018; daily data showing the pH and temperature of the sea water F2 larval phase: 1 April 2018 – 1 June 2018; monthly data showing physico-chemical and carbonate parameters of the sea water and daily data showing the pH and temperature of the sea water F2 juvenile phase: 2 April 2018 – 24 October 2018; daily data showing the pH and temperature of the sea water F2 juvenile phase: 2 April 2018 – 11 February 2019; monthly data showing physico-chemical and carbonate parameters of the sea water pH in NIST scale and temperature were daily measured with a WTW 3110 pH meter ... |
format |
Dataset |
author |
Cohen-rengifo, Mishal Mouchel, Olivier Collet, Sophie Cominassi, Louise Howald, Sarah Crespel, Amélie Cabon, Cabon Danion, Morgane Mazurais, David |
author_facet |
Cohen-rengifo, Mishal Mouchel, Olivier Collet, Sophie Cominassi, Louise Howald, Sarah Crespel, Amélie Cabon, Cabon Danion, Morgane Mazurais, David |
author_sort |
Cohen-rengifo, Mishal |
title |
Partial raw data: sea water carbonate system after years of transgenerational exposure to ocean acidification in the European Sea Bass Dicentrarchus labrax |
title_short |
Partial raw data: sea water carbonate system after years of transgenerational exposure to ocean acidification in the European Sea Bass Dicentrarchus labrax |
title_full |
Partial raw data: sea water carbonate system after years of transgenerational exposure to ocean acidification in the European Sea Bass Dicentrarchus labrax |
title_fullStr |
Partial raw data: sea water carbonate system after years of transgenerational exposure to ocean acidification in the European Sea Bass Dicentrarchus labrax |
title_full_unstemmed |
Partial raw data: sea water carbonate system after years of transgenerational exposure to ocean acidification in the European Sea Bass Dicentrarchus labrax |
title_sort |
partial raw data: sea water carbonate system after years of transgenerational exposure to ocean acidification in the european sea bass dicentrarchus labrax |
publisher |
SEANOE |
publishDate |
2022 |
url |
https://doi.org/10.17882/87395 https://www.seanoe.org/data/00762/87395/ |
op_coverage |
North 48.35, South 48.35, East -4.56, West -4.56 |
genre |
Ocean acidification |
genre_facet |
Ocean acidification |
op_relation |
doi:10.17882/87395 https://doi.org/10.17882/87395 https://www.seanoe.org/data/00762/87395/ |
op_rights |
CC-BY |
op_doi |
https://doi.org/10.17882/87395 |
_version_ |
1775354008050860032 |