Towards a sustainable Arctic fishery: Population genomics of lake whitefish in a hybrid species complex
Genetic variation is an important predictor of population persistence under changing or stressful environmental conditions. Consequently, efforts to preserve genetic variation by identifying genetically distinct populations and delineating management units are primary goals of conservation genetics...
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ftqueensuniv:oai:https://qspace.library.queensu.ca:1974/27468 2024-06-02T08:00:06+00:00 Towards a sustainable Arctic fishery: Population genomics of lake whitefish in a hybrid species complex Driver, Hannah Biology Lougheed, Stephen 2019-11-28T16:05:26Z application/pdf http://hdl.handle.net/1974/27468 eng eng Canadian theses http://hdl.handle.net/1974/27468 Queen's University's Thesis/Dissertation Non-Exclusive License for Deposit to QSpace and Library and Archives Canada ProQuest PhD and Master's Theses International Dissemination Agreement Intellectual Property Guidelines at Queen's University Copying and Preserving Your Thesis This publication is made available by the authority of the copyright owner solely for the purpose of private study and research and may not be copied or reproduced except as permitted by the copyright laws without written authority from the copyright owner. Attribution 3.0 United States http://creativecommons.org/licenses/by/3.0/us/ Population Genetics Genomics Hybridization Genetic Structure Conservation Fisheries Management Lake Whitefish Arctic Cisco Sardine Cisco Coregonus Clupeaformis ddRADseq Sustainable Fishery thesis 2019 ftqueensuniv 2024-05-06T10:47:32Z Genetic variation is an important predictor of population persistence under changing or stressful environmental conditions. Consequently, efforts to preserve genetic variation by identifying genetically distinct populations and delineating management units are primary goals of conservation genetics and fisheries management. Accelerated melting of sea ice in the lower Northwest Passage (LNWP) in Nunavut has recently opened the passage to shipping, providing an opportunity for fishery establishment. Nunavut communities have some of the highest rates of food insecurity across Canada, so the commercial harvest of profitable fish species could help to alleviate this crisis. However, sustainable fishery management in the LNWP requires the characterization of genetic structure in focal species to determine the best practices for managing demographically independent populations and, over the longer term, conserving genetic variation. The lake whitefish (Coregonus clupeaformis) is an important commercial species across Canada, is abundant in the LNWP, and is valued by the local people in Nunavut. However, lake whitefish have only recently expanded their range into this area, and the distribution of their genetic variation across the LNWP is unknown. Using genome-wide panels of single nucleotide polymorphisms, my results suggest one genetic population of lake whitefish in the LNWP. However, using putatively adaptive markers, I find weak evidence for two to three units of lake whitefish in the area. Further, I uncover genetic indication of hybridization between lake whitefish, Arctic cisco (C. autumnalis), and sardine cisco (C. sardinella) in the LNWP. Admixture among these species may make setting sustainable catch limits for lake whitefish challenging, as fishing pressures will likely decrease the abundance and genetic diversity of each species. Thus, my work aims to inform fishing regulations that reduce the relative exploitation of genetically distinct units of lake whitefish and minimize impacts of harvest on hybrids ... Thesis Arctic cisco Arctic Northwest passage Nunavut Sea ice Queen's University, Ontario: QSpace Arctic Nunavut Canada Northwest Passage |
institution |
Open Polar |
collection |
Queen's University, Ontario: QSpace |
op_collection_id |
ftqueensuniv |
language |
English |
topic |
Population Genetics Genomics Hybridization Genetic Structure Conservation Fisheries Management Lake Whitefish Arctic Cisco Sardine Cisco Coregonus Clupeaformis ddRADseq Sustainable Fishery |
spellingShingle |
Population Genetics Genomics Hybridization Genetic Structure Conservation Fisheries Management Lake Whitefish Arctic Cisco Sardine Cisco Coregonus Clupeaformis ddRADseq Sustainable Fishery Driver, Hannah Towards a sustainable Arctic fishery: Population genomics of lake whitefish in a hybrid species complex |
topic_facet |
Population Genetics Genomics Hybridization Genetic Structure Conservation Fisheries Management Lake Whitefish Arctic Cisco Sardine Cisco Coregonus Clupeaformis ddRADseq Sustainable Fishery |
description |
Genetic variation is an important predictor of population persistence under changing or stressful environmental conditions. Consequently, efforts to preserve genetic variation by identifying genetically distinct populations and delineating management units are primary goals of conservation genetics and fisheries management. Accelerated melting of sea ice in the lower Northwest Passage (LNWP) in Nunavut has recently opened the passage to shipping, providing an opportunity for fishery establishment. Nunavut communities have some of the highest rates of food insecurity across Canada, so the commercial harvest of profitable fish species could help to alleviate this crisis. However, sustainable fishery management in the LNWP requires the characterization of genetic structure in focal species to determine the best practices for managing demographically independent populations and, over the longer term, conserving genetic variation. The lake whitefish (Coregonus clupeaformis) is an important commercial species across Canada, is abundant in the LNWP, and is valued by the local people in Nunavut. However, lake whitefish have only recently expanded their range into this area, and the distribution of their genetic variation across the LNWP is unknown. Using genome-wide panels of single nucleotide polymorphisms, my results suggest one genetic population of lake whitefish in the LNWP. However, using putatively adaptive markers, I find weak evidence for two to three units of lake whitefish in the area. Further, I uncover genetic indication of hybridization between lake whitefish, Arctic cisco (C. autumnalis), and sardine cisco (C. sardinella) in the LNWP. Admixture among these species may make setting sustainable catch limits for lake whitefish challenging, as fishing pressures will likely decrease the abundance and genetic diversity of each species. Thus, my work aims to inform fishing regulations that reduce the relative exploitation of genetically distinct units of lake whitefish and minimize impacts of harvest on hybrids ... |
author2 |
Biology Lougheed, Stephen |
format |
Thesis |
author |
Driver, Hannah |
author_facet |
Driver, Hannah |
author_sort |
Driver, Hannah |
title |
Towards a sustainable Arctic fishery: Population genomics of lake whitefish in a hybrid species complex |
title_short |
Towards a sustainable Arctic fishery: Population genomics of lake whitefish in a hybrid species complex |
title_full |
Towards a sustainable Arctic fishery: Population genomics of lake whitefish in a hybrid species complex |
title_fullStr |
Towards a sustainable Arctic fishery: Population genomics of lake whitefish in a hybrid species complex |
title_full_unstemmed |
Towards a sustainable Arctic fishery: Population genomics of lake whitefish in a hybrid species complex |
title_sort |
towards a sustainable arctic fishery: population genomics of lake whitefish in a hybrid species complex |
publishDate |
2019 |
url |
http://hdl.handle.net/1974/27468 |
geographic |
Arctic Nunavut Canada Northwest Passage |
geographic_facet |
Arctic Nunavut Canada Northwest Passage |
genre |
Arctic cisco Arctic Northwest passage Nunavut Sea ice |
genre_facet |
Arctic cisco Arctic Northwest passage Nunavut Sea ice |
op_relation |
Canadian theses http://hdl.handle.net/1974/27468 |
op_rights |
Queen's University's Thesis/Dissertation Non-Exclusive License for Deposit to QSpace and Library and Archives Canada ProQuest PhD and Master's Theses International Dissemination Agreement Intellectual Property Guidelines at Queen's University Copying and Preserving Your Thesis This publication is made available by the authority of the copyright owner solely for the purpose of private study and research and may not be copied or reproduced except as permitted by the copyright laws without written authority from the copyright owner. Attribution 3.0 United States http://creativecommons.org/licenses/by/3.0/us/ |
_version_ |
1800744124197896192 |