Twenty-two novel microsatellite loci for lumpfish (Cyclopterus lumpus)
Lumpfish (Cyclopterus lumpus L. 1758) are widely distributed on both sides of the North Atlantic. They are a commercially important species, but stock size estimates have declined since the mid-1980s in Canada, Norway and Iceland. Little is known about the biology of this species, in particular the...
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ftqueensubelpubl:oai:pure.qub.ac.uk/portal:publications/c53f423c-e241-4263-9c12-d6126e2833e0 2023-05-15T16:49:47+02:00 Twenty-two novel microsatellite loci for lumpfish (Cyclopterus lumpus) Skirnisdottir, Sigurlaug Olafsdottir, Gudbjorg Olafsson, Kristinn Jendrossek, Thomas Lloyd, Hywel ap Dafydd Helyar, Sarah Pampoulie, Christophe Danielsdottir, Anna K. Kasper, Jacob M. 2013 https://pure.qub.ac.uk/en/publications/twentytwo-novel-microsatellite-loci-for-lumpfish-cyclopterus-lumpus(c53f423c-e241-4263-9c12-d6126e2833e0).html https://doi.org/10.1007/s12686-012-9762-y http://www.scopus.com/inward/record.url?scp=84873701992&partnerID=8YFLogxK eng eng info:eu-repo/semantics/restrictedAccess Skirnisdottir , S , Olafsdottir , G , Olafsson , K , Jendrossek , T , Lloyd , H A D , Helyar , S , Pampoulie , C , Danielsdottir , A K & Kasper , J M 2013 , ' Twenty-two novel microsatellite loci for lumpfish (Cyclopterus lumpus) ' , Conservation Genetics Resources , vol. 5 , no. 1 , pp. 177-179 . https://doi.org/10.1007/s12686-012-9762-y Genotyping Lumpfish Microsatellite Next generation sequencing /dk/atira/pure/subjectarea/asjc/1300/1311 Genetics /dk/atira/pure/subjectarea/asjc/1100/1105 Ecology Evolution Behavior and Systematics article 2013 ftqueensubelpubl https://doi.org/10.1007/s12686-012-9762-y 2022-02-09T22:18:45Z Lumpfish (Cyclopterus lumpus L. 1758) are widely distributed on both sides of the North Atlantic. They are a commercially important species, but stock size estimates have declined since the mid-1980s in Canada, Norway and Iceland. Little is known about the biology of this species, in particular the breeding migrations and population structure which are fundamental for effective management. This paper describes the development and characterization of twenty-two polymorphic microsatellite loci using next generation sequencing. The number of alleles per locus ranged from 3 to 27 in two geographically distant North Atlantic populations, with observed and expected heterozygosities ranging between 0. 0625-0. 979 and 0. 0618-0. 946, respectively. These loci are an important resource that will allow assessment of the population genetic structure of this species, and contribute to its appropriate management. Article in Journal/Newspaper Iceland North Atlantic Queen's University Belfast Research Portal Canada Norway Conservation Genetics Resources 5 1 177 179 |
institution |
Open Polar |
collection |
Queen's University Belfast Research Portal |
op_collection_id |
ftqueensubelpubl |
language |
English |
topic |
Genotyping Lumpfish Microsatellite Next generation sequencing /dk/atira/pure/subjectarea/asjc/1300/1311 Genetics /dk/atira/pure/subjectarea/asjc/1100/1105 Ecology Evolution Behavior and Systematics |
spellingShingle |
Genotyping Lumpfish Microsatellite Next generation sequencing /dk/atira/pure/subjectarea/asjc/1300/1311 Genetics /dk/atira/pure/subjectarea/asjc/1100/1105 Ecology Evolution Behavior and Systematics Skirnisdottir, Sigurlaug Olafsdottir, Gudbjorg Olafsson, Kristinn Jendrossek, Thomas Lloyd, Hywel ap Dafydd Helyar, Sarah Pampoulie, Christophe Danielsdottir, Anna K. Kasper, Jacob M. Twenty-two novel microsatellite loci for lumpfish (Cyclopterus lumpus) |
topic_facet |
Genotyping Lumpfish Microsatellite Next generation sequencing /dk/atira/pure/subjectarea/asjc/1300/1311 Genetics /dk/atira/pure/subjectarea/asjc/1100/1105 Ecology Evolution Behavior and Systematics |
description |
Lumpfish (Cyclopterus lumpus L. 1758) are widely distributed on both sides of the North Atlantic. They are a commercially important species, but stock size estimates have declined since the mid-1980s in Canada, Norway and Iceland. Little is known about the biology of this species, in particular the breeding migrations and population structure which are fundamental for effective management. This paper describes the development and characterization of twenty-two polymorphic microsatellite loci using next generation sequencing. The number of alleles per locus ranged from 3 to 27 in two geographically distant North Atlantic populations, with observed and expected heterozygosities ranging between 0. 0625-0. 979 and 0. 0618-0. 946, respectively. These loci are an important resource that will allow assessment of the population genetic structure of this species, and contribute to its appropriate management. |
format |
Article in Journal/Newspaper |
author |
Skirnisdottir, Sigurlaug Olafsdottir, Gudbjorg Olafsson, Kristinn Jendrossek, Thomas Lloyd, Hywel ap Dafydd Helyar, Sarah Pampoulie, Christophe Danielsdottir, Anna K. Kasper, Jacob M. |
author_facet |
Skirnisdottir, Sigurlaug Olafsdottir, Gudbjorg Olafsson, Kristinn Jendrossek, Thomas Lloyd, Hywel ap Dafydd Helyar, Sarah Pampoulie, Christophe Danielsdottir, Anna K. Kasper, Jacob M. |
author_sort |
Skirnisdottir, Sigurlaug |
title |
Twenty-two novel microsatellite loci for lumpfish (Cyclopterus lumpus) |
title_short |
Twenty-two novel microsatellite loci for lumpfish (Cyclopterus lumpus) |
title_full |
Twenty-two novel microsatellite loci for lumpfish (Cyclopterus lumpus) |
title_fullStr |
Twenty-two novel microsatellite loci for lumpfish (Cyclopterus lumpus) |
title_full_unstemmed |
Twenty-two novel microsatellite loci for lumpfish (Cyclopterus lumpus) |
title_sort |
twenty-two novel microsatellite loci for lumpfish (cyclopterus lumpus) |
publishDate |
2013 |
url |
https://pure.qub.ac.uk/en/publications/twentytwo-novel-microsatellite-loci-for-lumpfish-cyclopterus-lumpus(c53f423c-e241-4263-9c12-d6126e2833e0).html https://doi.org/10.1007/s12686-012-9762-y http://www.scopus.com/inward/record.url?scp=84873701992&partnerID=8YFLogxK |
geographic |
Canada Norway |
geographic_facet |
Canada Norway |
genre |
Iceland North Atlantic |
genre_facet |
Iceland North Atlantic |
op_source |
Skirnisdottir , S , Olafsdottir , G , Olafsson , K , Jendrossek , T , Lloyd , H A D , Helyar , S , Pampoulie , C , Danielsdottir , A K & Kasper , J M 2013 , ' Twenty-two novel microsatellite loci for lumpfish (Cyclopterus lumpus) ' , Conservation Genetics Resources , vol. 5 , no. 1 , pp. 177-179 . https://doi.org/10.1007/s12686-012-9762-y |
op_rights |
info:eu-repo/semantics/restrictedAccess |
op_doi |
https://doi.org/10.1007/s12686-012-9762-y |
container_title |
Conservation Genetics Resources |
container_volume |
5 |
container_issue |
1 |
container_start_page |
177 |
op_container_end_page |
179 |
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1766039977483829248 |