Current status and potential of genomic selection to improve selective breeding in the main aquaculture species of International Council for the Exploration of the Sea (ICES) member countries
Selective breeding has been successfully applied to improve profitability and sustainability in numerous aquatic species. Recent developments of high throughput genotyping technology now enable the implementation of genomic selection, a method aiming to predict the breeding value of candidates based...
Published in: | Aquaculture Reports |
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Main Authors: | , , , , , , , , , , , , , , , , , |
Format: | Article in Journal/Newspaper |
Language: | English |
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Online Access: | https://pure.qub.ac.uk/en/publications/3512f7c3-4250-4130-bce4-a249b8c0aa6c https://doi.org/10.1016/j.aqrep.2021.100700 https://pureadmin.qub.ac.uk/ws/files/238680876/current.pdf |
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ftqueensubelpubl:oai:pure.qub.ac.uk/portal:publications/3512f7c3-4250-4130-bce4-a249b8c0aa6c 2024-09-09T19:29:48+00:00 Current status and potential of genomic selection to improve selective breeding in the main aquaculture species of International Council for the Exploration of the Sea (ICES) member countries Boudry, Pierre Allal, François Aslam, Muhammad L. Bargelloni, Luca Bean, Tim P. Brard-Fudulea, Sophie Brieuc, Marine S.O. Calboli, Federico C.F. Gilbey, John Haffray, Pierrick Lamy, Jean-Baptiste Morvezen, Romain Purcell, Catherine Prodöhl, Paulo A. Vandeputte, Marc Waldbieser, Geoffrey C. Sonesson, Anna K. Houston, Ross D. 2021-07 application/pdf https://pure.qub.ac.uk/en/publications/3512f7c3-4250-4130-bce4-a249b8c0aa6c https://doi.org/10.1016/j.aqrep.2021.100700 https://pureadmin.qub.ac.uk/ws/files/238680876/current.pdf eng eng https://pure.qub.ac.uk/en/publications/3512f7c3-4250-4130-bce4-a249b8c0aa6c info:eu-repo/semantics/openAccess Boudry , P , Allal , F , Aslam , M L , Bargelloni , L , Bean , T P , Brard-Fudulea , S , Brieuc , M S O , Calboli , F C F , Gilbey , J , Haffray , P , Lamy , J-B , Morvezen , R , Purcell , C , Prodöhl , P A , Vandeputte , M , Waldbieser , G C , Sonesson , A K & Houston , R D 2021 , ' Current status and potential of genomic selection to improve selective breeding in the main aquaculture species of International Council for the Exploration of the Sea (ICES) member countries ' , Aquaculture Reports , vol. 20 , 100700 . https://doi.org/10.1016/j.aqrep.2021.100700 Aquaculture Selective breeding Genomic selection SNP array Genotyping by sequencing article 2021 ftqueensubelpubl https://doi.org/10.1016/j.aqrep.2021.100700 2024-06-18T14:40:54Z Selective breeding has been successfully applied to improve profitability and sustainability in numerous aquatic species. Recent developments of high throughput genotyping technology now enable the implementation of genomic selection, a method aiming to predict the breeding value of candidates based on their genotype at genome-wide markers. In this review article, we review the state of the arts, challenges and prospects for the application of genomic selection in aquaculture species. The particular focus is on the status of genomic selection in several major aquaculture species of International Council for the Exploration of the Sea (ICES) member countries: Atlantic salmon, rainbow trout, Atlantic cod, American catfish, Pacific oyster, European sea bass and gilthead sea bream. While the potential of genomic selection is clear, tailored species-specific applications will be needed to maximise its benefit for the aquaculture sector. Article in Journal/Newspaper atlantic cod Atlantic salmon Pacific oyster Queen's University Belfast Research Portal Pacific Aquaculture Reports 20 100700 |
institution |
Open Polar |
collection |
Queen's University Belfast Research Portal |
op_collection_id |
ftqueensubelpubl |
language |
English |
topic |
Aquaculture Selective breeding Genomic selection SNP array Genotyping by sequencing |
spellingShingle |
Aquaculture Selective breeding Genomic selection SNP array Genotyping by sequencing Boudry, Pierre Allal, François Aslam, Muhammad L. Bargelloni, Luca Bean, Tim P. Brard-Fudulea, Sophie Brieuc, Marine S.O. Calboli, Federico C.F. Gilbey, John Haffray, Pierrick Lamy, Jean-Baptiste Morvezen, Romain Purcell, Catherine Prodöhl, Paulo A. Vandeputte, Marc Waldbieser, Geoffrey C. Sonesson, Anna K. Houston, Ross D. Current status and potential of genomic selection to improve selective breeding in the main aquaculture species of International Council for the Exploration of the Sea (ICES) member countries |
topic_facet |
Aquaculture Selective breeding Genomic selection SNP array Genotyping by sequencing |
description |
Selective breeding has been successfully applied to improve profitability and sustainability in numerous aquatic species. Recent developments of high throughput genotyping technology now enable the implementation of genomic selection, a method aiming to predict the breeding value of candidates based on their genotype at genome-wide markers. In this review article, we review the state of the arts, challenges and prospects for the application of genomic selection in aquaculture species. The particular focus is on the status of genomic selection in several major aquaculture species of International Council for the Exploration of the Sea (ICES) member countries: Atlantic salmon, rainbow trout, Atlantic cod, American catfish, Pacific oyster, European sea bass and gilthead sea bream. While the potential of genomic selection is clear, tailored species-specific applications will be needed to maximise its benefit for the aquaculture sector. |
format |
Article in Journal/Newspaper |
author |
Boudry, Pierre Allal, François Aslam, Muhammad L. Bargelloni, Luca Bean, Tim P. Brard-Fudulea, Sophie Brieuc, Marine S.O. Calboli, Federico C.F. Gilbey, John Haffray, Pierrick Lamy, Jean-Baptiste Morvezen, Romain Purcell, Catherine Prodöhl, Paulo A. Vandeputte, Marc Waldbieser, Geoffrey C. Sonesson, Anna K. Houston, Ross D. |
author_facet |
Boudry, Pierre Allal, François Aslam, Muhammad L. Bargelloni, Luca Bean, Tim P. Brard-Fudulea, Sophie Brieuc, Marine S.O. Calboli, Federico C.F. Gilbey, John Haffray, Pierrick Lamy, Jean-Baptiste Morvezen, Romain Purcell, Catherine Prodöhl, Paulo A. Vandeputte, Marc Waldbieser, Geoffrey C. Sonesson, Anna K. Houston, Ross D. |
author_sort |
Boudry, Pierre |
title |
Current status and potential of genomic selection to improve selective breeding in the main aquaculture species of International Council for the Exploration of the Sea (ICES) member countries |
title_short |
Current status and potential of genomic selection to improve selective breeding in the main aquaculture species of International Council for the Exploration of the Sea (ICES) member countries |
title_full |
Current status and potential of genomic selection to improve selective breeding in the main aquaculture species of International Council for the Exploration of the Sea (ICES) member countries |
title_fullStr |
Current status and potential of genomic selection to improve selective breeding in the main aquaculture species of International Council for the Exploration of the Sea (ICES) member countries |
title_full_unstemmed |
Current status and potential of genomic selection to improve selective breeding in the main aquaculture species of International Council for the Exploration of the Sea (ICES) member countries |
title_sort |
current status and potential of genomic selection to improve selective breeding in the main aquaculture species of international council for the exploration of the sea (ices) member countries |
publishDate |
2021 |
url |
https://pure.qub.ac.uk/en/publications/3512f7c3-4250-4130-bce4-a249b8c0aa6c https://doi.org/10.1016/j.aqrep.2021.100700 https://pureadmin.qub.ac.uk/ws/files/238680876/current.pdf |
geographic |
Pacific |
geographic_facet |
Pacific |
genre |
atlantic cod Atlantic salmon Pacific oyster |
genre_facet |
atlantic cod Atlantic salmon Pacific oyster |
op_source |
Boudry , P , Allal , F , Aslam , M L , Bargelloni , L , Bean , T P , Brard-Fudulea , S , Brieuc , M S O , Calboli , F C F , Gilbey , J , Haffray , P , Lamy , J-B , Morvezen , R , Purcell , C , Prodöhl , P A , Vandeputte , M , Waldbieser , G C , Sonesson , A K & Houston , R D 2021 , ' Current status and potential of genomic selection to improve selective breeding in the main aquaculture species of International Council for the Exploration of the Sea (ICES) member countries ' , Aquaculture Reports , vol. 20 , 100700 . https://doi.org/10.1016/j.aqrep.2021.100700 |
op_relation |
https://pure.qub.ac.uk/en/publications/3512f7c3-4250-4130-bce4-a249b8c0aa6c |
op_rights |
info:eu-repo/semantics/openAccess |
op_doi |
https://doi.org/10.1016/j.aqrep.2021.100700 |
container_title |
Aquaculture Reports |
container_volume |
20 |
container_start_page |
100700 |
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1809898895169290240 |