Adding stable carbon isotopes improves model representation of the role of microbial communities in peatland methane cycling

Climate change is expected to have significant and uncertain impacts on methane (CH4) emissions from northern peatlands. Biogeochemical models can extrapolate site‐specificCH4 measurements to larger scales and predict responses of CH4 emissions to environmental changes. However, these models include...

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Published in:Journal of Advances in Modeling Earth Systems
Main Authors: Deng, Jia, McCalley, Carmody K., Frolking, Steve, Chanton, Jeff, Crill, Patrick, Varner, Ruth, Tyson, Gene, Rich, Virginia, Hines, Mark, Saleska, Scott R., Li, Changsheng
Format: Article in Journal/Newspaper
Language:unknown
Published: Wiley-Blackwell 2017
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Online Access:https://eprints.qut.edu.au/209431/
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spelling ftqueensland:oai:eprints.qut.edu.au:209431 2024-02-04T10:03:53+01:00 Adding stable carbon isotopes improves model representation of the role of microbial communities in peatland methane cycling Deng, Jia McCalley, Carmody K. Frolking, Steve Chanton, Jeff Crill, Patrick Varner, Ruth Tyson, Gene Rich, Virginia Hines, Mark Saleska, Scott R. Li, Changsheng 2017 application/pdf https://eprints.qut.edu.au/209431/ unknown Wiley-Blackwell https://eprints.qut.edu.au/209431/1/81234708.pdf doi:10.1002/2016MS000817 Deng, Jia, McCalley, Carmody K., Frolking, Steve, Chanton, Jeff, Crill, Patrick, Varner, Ruth, Tyson, Gene, Rich, Virginia, Hines, Mark, Saleska, Scott R., & Li, Changsheng (2017) Adding stable carbon isotopes improves model representation of the role of microbial communities in peatland methane cycling. Journal of Advances in Modeling Earth Systems, 9(2), pp. 1412-1430. https://eprints.qut.edu.au/209431/ free_to_read http://creativecommons.org/licenses/by-nc-nd/4.0/ 2017 The Author(s) This work is covered by copyright. Unless the document is being made available under a Creative Commons Licence, you must assume that re-use is limited to personal use and that permission from the copyright owner must be obtained for all other uses. If the document is available under a Creative Commons License (or other specified license) then refer to the Licence for details of permitted re-use. It is a condition of access that users recognise and abide by the legal requirements associated with these rights. If you believe that this work infringes copyright please provide details by email to qut.copyright@qut.edu.au Journal of Advances in Modeling Earth Systems Contribution to Journal 2017 ftqueensland https://doi.org/10.1002/2016MS000817 2024-01-08T23:57:22Z Climate change is expected to have significant and uncertain impacts on methane (CH4) emissions from northern peatlands. Biogeochemical models can extrapolate site‐specificCH4 measurements to larger scales and predict responses of CH4 emissions to environmental changes. However, these models include considerable uncertainties and limitations in representing CH4 production, consumption, and transport processes. To improve predictions of CH4 transformations, we incorporated acetate and stable carbon (C) isotopic dynamics associated with CH4 cycling into a biogeochemistry model, DNDC. By including these new features, DNDC explicitly simulates acetate dynamics and the relative contribution of acetotrophic and hydrogenotrophic methanogenesis (AM and HM) to CH4 production, and predicts the C isotopic signature (δ13C) in soil C pools and emitted gases. When tested against biogeochemical and microbial community observations at two sites in a zone of thawing permafrost in a subarctic peatland in Sweden, the new formulation substantially improved agreement with CH4 production pathways and δ13C in emitted CH4 (δ13C‐CH4), a measure of the integrated effects of microbial production and consumption, and of physical transport. We also investigated the sensitivity of simulated δ13C‐CH4 to C isotopic composition of substrates and, to fractionation factors for CH4 production (αAM and αHM), CH4 oxidation (αMO), and plant‐mediated CH4 transport (αTP). The sensitivity analysis indicated that the δ13C‐CH4 is highly sensitive to the factors associated with microbial metabolism (αAM, αHM, and αMO). The model framework simulating stable C isotopic dynamics provides a robust basis for better constraining and testing microbial mechanisms in predicting CH4 cycling in peatlands. Article in Journal/Newspaper permafrost Subarctic Queensland University of Technology: QUT ePrints Journal of Advances in Modeling Earth Systems 9 2 1412 1430
institution Open Polar
collection Queensland University of Technology: QUT ePrints
op_collection_id ftqueensland
language unknown
description Climate change is expected to have significant and uncertain impacts on methane (CH4) emissions from northern peatlands. Biogeochemical models can extrapolate site‐specificCH4 measurements to larger scales and predict responses of CH4 emissions to environmental changes. However, these models include considerable uncertainties and limitations in representing CH4 production, consumption, and transport processes. To improve predictions of CH4 transformations, we incorporated acetate and stable carbon (C) isotopic dynamics associated with CH4 cycling into a biogeochemistry model, DNDC. By including these new features, DNDC explicitly simulates acetate dynamics and the relative contribution of acetotrophic and hydrogenotrophic methanogenesis (AM and HM) to CH4 production, and predicts the C isotopic signature (δ13C) in soil C pools and emitted gases. When tested against biogeochemical and microbial community observations at two sites in a zone of thawing permafrost in a subarctic peatland in Sweden, the new formulation substantially improved agreement with CH4 production pathways and δ13C in emitted CH4 (δ13C‐CH4), a measure of the integrated effects of microbial production and consumption, and of physical transport. We also investigated the sensitivity of simulated δ13C‐CH4 to C isotopic composition of substrates and, to fractionation factors for CH4 production (αAM and αHM), CH4 oxidation (αMO), and plant‐mediated CH4 transport (αTP). The sensitivity analysis indicated that the δ13C‐CH4 is highly sensitive to the factors associated with microbial metabolism (αAM, αHM, and αMO). The model framework simulating stable C isotopic dynamics provides a robust basis for better constraining and testing microbial mechanisms in predicting CH4 cycling in peatlands.
format Article in Journal/Newspaper
author Deng, Jia
McCalley, Carmody K.
Frolking, Steve
Chanton, Jeff
Crill, Patrick
Varner, Ruth
Tyson, Gene
Rich, Virginia
Hines, Mark
Saleska, Scott R.
Li, Changsheng
spellingShingle Deng, Jia
McCalley, Carmody K.
Frolking, Steve
Chanton, Jeff
Crill, Patrick
Varner, Ruth
Tyson, Gene
Rich, Virginia
Hines, Mark
Saleska, Scott R.
Li, Changsheng
Adding stable carbon isotopes improves model representation of the role of microbial communities in peatland methane cycling
author_facet Deng, Jia
McCalley, Carmody K.
Frolking, Steve
Chanton, Jeff
Crill, Patrick
Varner, Ruth
Tyson, Gene
Rich, Virginia
Hines, Mark
Saleska, Scott R.
Li, Changsheng
author_sort Deng, Jia
title Adding stable carbon isotopes improves model representation of the role of microbial communities in peatland methane cycling
title_short Adding stable carbon isotopes improves model representation of the role of microbial communities in peatland methane cycling
title_full Adding stable carbon isotopes improves model representation of the role of microbial communities in peatland methane cycling
title_fullStr Adding stable carbon isotopes improves model representation of the role of microbial communities in peatland methane cycling
title_full_unstemmed Adding stable carbon isotopes improves model representation of the role of microbial communities in peatland methane cycling
title_sort adding stable carbon isotopes improves model representation of the role of microbial communities in peatland methane cycling
publisher Wiley-Blackwell
publishDate 2017
url https://eprints.qut.edu.au/209431/
genre permafrost
Subarctic
genre_facet permafrost
Subarctic
op_source Journal of Advances in Modeling Earth Systems
op_relation https://eprints.qut.edu.au/209431/1/81234708.pdf
doi:10.1002/2016MS000817
Deng, Jia, McCalley, Carmody K., Frolking, Steve, Chanton, Jeff, Crill, Patrick, Varner, Ruth, Tyson, Gene, Rich, Virginia, Hines, Mark, Saleska, Scott R., & Li, Changsheng (2017) Adding stable carbon isotopes improves model representation of the role of microbial communities in peatland methane cycling. Journal of Advances in Modeling Earth Systems, 9(2), pp. 1412-1430.
https://eprints.qut.edu.au/209431/
op_rights free_to_read
http://creativecommons.org/licenses/by-nc-nd/4.0/
2017 The Author(s)
This work is covered by copyright. Unless the document is being made available under a Creative Commons Licence, you must assume that re-use is limited to personal use and that permission from the copyright owner must be obtained for all other uses. If the document is available under a Creative Commons License (or other specified license) then refer to the Licence for details of permitted re-use. It is a condition of access that users recognise and abide by the legal requirements associated with these rights. If you believe that this work infringes copyright please provide details by email to qut.copyright@qut.edu.au
op_doi https://doi.org/10.1002/2016MS000817
container_title Journal of Advances in Modeling Earth Systems
container_volume 9
container_issue 2
container_start_page 1412
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