Admixture coefficients for 238 black rats ( Rattus rattus ) sampled in Haida Gwaii, BC.

Admixture coefficients were calculated using the full ddRAD dataset of 10,770 SNPs (top) or with a reduce GT-seq panel of 428 SNPs (bottom). Estimates were obtained using the snmf() function in the R-package LEA v 2.6.0 [ 52 ] at an optimal k = 9 and averaged over 20 iterations.

Bibliographic Details
Main Authors: Bryson M. F. Sjodin (8991983), Robyn L. Irvine (2903468), Michael A. Russello (8026964)
Format: Still Image
Language:unknown
Published: 2020
Subjects:
Microbiology
Genetics
Evolutionary Biology
Ecology
Marine Biology
Science Policy
Environmental Sciences not elsewhere classified
Biological Sciences not elsewhere classified
IAS
SNP
Haida Gwaii
GT-seq panel development
species management Invasive
DNA
application
RapidRat
Rattus rattus
Online Access:https://doi.org/10.1371/journal.pone.0234694.g006
Description
Summary:Admixture coefficients were calculated using the full ddRAD dataset of 10,770 SNPs (top) or with a reduce GT-seq panel of 428 SNPs (bottom). Estimates were obtained using the snmf() function in the R-package LEA v 2.6.0 [ 52 ] at an optimal k = 9 and averaged over 20 iterations.

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