Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems

Nucleocytoplasmic large DNA viruses (NCLDVs) infect various marine eukaryotes. However, little is known about NCLDV diversity and their relationships with eukaryotic hosts in marine environments, the elucidation of which will advance the current understanding of marine ecosystems. This study charact...

Full description

Bibliographic Details
Published in:Microorganisms
Main Authors: Kim, Kang Eun, Joo, Hyoung Min, Lee, Taek-Kyun, Kim, Hyun-Jung, Kim, Yu Jin, Kim, Bo Kyung, Ha, Sun-Yong, Jung, Seung Won
Format: Text
Language:English
Published: MDPI 2023
Subjects:
Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9862967/
http://www.ncbi.nlm.nih.gov/pubmed/36677461
https://doi.org/10.3390/microorganisms11010169
id ftpubmed:oai:pubmedcentral.nih.gov:9862967
record_format openpolar
spelling ftpubmed:oai:pubmedcentral.nih.gov:9862967 2023-05-15T14:52:31+02:00 Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems Kim, Kang Eun Joo, Hyoung Min Lee, Taek-Kyun Kim, Hyun-Jung Kim, Yu Jin Kim, Bo Kyung Ha, Sun-Yong Jung, Seung Won 2023-01-09 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9862967/ http://www.ncbi.nlm.nih.gov/pubmed/36677461 https://doi.org/10.3390/microorganisms11010169 en eng MDPI http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9862967/ http://www.ncbi.nlm.nih.gov/pubmed/36677461 http://dx.doi.org/10.3390/microorganisms11010169 © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). CC-BY Microorganisms Article Text 2023 ftpubmed https://doi.org/10.3390/microorganisms11010169 2023-01-29T01:50:31Z Nucleocytoplasmic large DNA viruses (NCLDVs) infect various marine eukaryotes. However, little is known about NCLDV diversity and their relationships with eukaryotic hosts in marine environments, the elucidation of which will advance the current understanding of marine ecosystems. This study characterizes the interplay between NCLDVs and the eukaryotic plankton community (EPC) in the sub-Arctic area using metagenomics and metabarcoding to investigate NCLDVs and EPC, respectively, in the Kongsfjorden ecosystem of Svalbard (Norway) in April and June 2018. Gyrodinium helveticum (Dinophyceae) is the most prevalent eukaryotic taxon in the EPC in April, during which time Mimiviridae (31.8%), Poxviridae (25.1%), Phycodnaviridae (14.7%) and Pandoraviridae (13.1%) predominate. However, in June, the predominant taxon is Aureococcus anophagefferens (Pelagophyceae), and the NCLDVs, Poxviridae (32.9%), Mimiviridae (29.1%), and Phycodnaviridae (18.5%) appear in higher proportions with an increase in Pelagophyceae, Bacillariophyceae, and Chlorophyta groups. Thus, differences in NCLDVs may be caused by changes in EPC composition in response to environmental changes, such as increases in water temperature and light intensity. Taken together, these findings are particularly relevant considering the anticipated impact of NCLDV-induced EPC control mechanisms on polar regions and, therefore, improve the understanding of the Sub-Arctic Kongsfjorden ecosystem. Text Arctic Kongsfjord* Kongsfjorden Svalbard PubMed Central (PMC) Arctic Norway Svalbard Microorganisms 11 1 169
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Article
spellingShingle Article
Kim, Kang Eun
Joo, Hyoung Min
Lee, Taek-Kyun
Kim, Hyun-Jung
Kim, Yu Jin
Kim, Bo Kyung
Ha, Sun-Yong
Jung, Seung Won
Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems
topic_facet Article
description Nucleocytoplasmic large DNA viruses (NCLDVs) infect various marine eukaryotes. However, little is known about NCLDV diversity and their relationships with eukaryotic hosts in marine environments, the elucidation of which will advance the current understanding of marine ecosystems. This study characterizes the interplay between NCLDVs and the eukaryotic plankton community (EPC) in the sub-Arctic area using metagenomics and metabarcoding to investigate NCLDVs and EPC, respectively, in the Kongsfjorden ecosystem of Svalbard (Norway) in April and June 2018. Gyrodinium helveticum (Dinophyceae) is the most prevalent eukaryotic taxon in the EPC in April, during which time Mimiviridae (31.8%), Poxviridae (25.1%), Phycodnaviridae (14.7%) and Pandoraviridae (13.1%) predominate. However, in June, the predominant taxon is Aureococcus anophagefferens (Pelagophyceae), and the NCLDVs, Poxviridae (32.9%), Mimiviridae (29.1%), and Phycodnaviridae (18.5%) appear in higher proportions with an increase in Pelagophyceae, Bacillariophyceae, and Chlorophyta groups. Thus, differences in NCLDVs may be caused by changes in EPC composition in response to environmental changes, such as increases in water temperature and light intensity. Taken together, these findings are particularly relevant considering the anticipated impact of NCLDV-induced EPC control mechanisms on polar regions and, therefore, improve the understanding of the Sub-Arctic Kongsfjorden ecosystem.
format Text
author Kim, Kang Eun
Joo, Hyoung Min
Lee, Taek-Kyun
Kim, Hyun-Jung
Kim, Yu Jin
Kim, Bo Kyung
Ha, Sun-Yong
Jung, Seung Won
author_facet Kim, Kang Eun
Joo, Hyoung Min
Lee, Taek-Kyun
Kim, Hyun-Jung
Kim, Yu Jin
Kim, Bo Kyung
Ha, Sun-Yong
Jung, Seung Won
author_sort Kim, Kang Eun
title Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems
title_short Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems
title_full Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems
title_fullStr Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems
title_full_unstemmed Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems
title_sort covariance of marine nucleocytoplasmic large dna viruses with eukaryotic plankton communities in the sub-arctic kongsfjorden ecosystem: a metagenomic analysis of marine microbial ecosystems
publisher MDPI
publishDate 2023
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9862967/
http://www.ncbi.nlm.nih.gov/pubmed/36677461
https://doi.org/10.3390/microorganisms11010169
geographic Arctic
Norway
Svalbard
geographic_facet Arctic
Norway
Svalbard
genre Arctic
Kongsfjord*
Kongsfjorden
Svalbard
genre_facet Arctic
Kongsfjord*
Kongsfjorden
Svalbard
op_source Microorganisms
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9862967/
http://www.ncbi.nlm.nih.gov/pubmed/36677461
http://dx.doi.org/10.3390/microorganisms11010169
op_rights © 2023 by the authors.
https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
op_rightsnorm CC-BY
op_doi https://doi.org/10.3390/microorganisms11010169
container_title Microorganisms
container_volume 11
container_issue 1
container_start_page 169
_version_ 1766323760694034432