CRITTERBASE, a science-driven data warehouse for marine biota
Data on marine biota exist in many formats and sources, such as published literature, data repositories, and unpublished material. Due to this heterogeneity, information is difficult to find, access and combine, severely impeding its reuse for further scientific analysis and its long-term availabili...
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ftpubmed:oai:pubmedcentral.nih.gov:9357058 2023-05-15T13:58:53+02:00 CRITTERBASE, a science-driven data warehouse for marine biota Teschke, Katharina Kraan, Casper Kloss, Paul Andresen, Henrike Beermann, Jan Fiorentino, Dario Gusky, Manuela Hansen, Miriam L. S. Konijnenberg, Rebecca Koppe, Roland Pehlke, Hendrik Piepenburg, Dieter Sabbagh, Tawfik Wrede, Alexa Brey, Thomas Dannheim, Jennifer 2022-08-06 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9357058/ http://www.ncbi.nlm.nih.gov/pubmed/35933490 https://doi.org/10.1038/s41597-022-01590-1 en eng Nature Publishing Group UK http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9357058/ http://www.ncbi.nlm.nih.gov/pubmed/35933490 http://dx.doi.org/10.1038/s41597-022-01590-1 © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . CC-BY Sci Data Article Text 2022 ftpubmed https://doi.org/10.1038/s41597-022-01590-1 2022-08-14T00:39:36Z Data on marine biota exist in many formats and sources, such as published literature, data repositories, and unpublished material. Due to this heterogeneity, information is difficult to find, access and combine, severely impeding its reuse for further scientific analysis and its long-term availability for future generations. To address this challenge, we present CRITTERBASE, a publicly accessible data warehouse and interactive portal that currently hosts quality-controlled and taxonomically standardized presence/absence, abundance, and biomass data for 18,644 samples and 3,664 benthic taxa (2,824 of which at species level). These samples were collected by grabs, underwater imaging or trawls in Arctic, North Sea and Antarctic regions between the years 1800 and 2014. Data were collated from literature, unpublished data, own research and online repositories. All metadata and links to primary sources are included. We envision CRITTERBASE becoming a valuable and continuously expanding tool for a wide range of usages, such as studies of spatio-temporal biodiversity patterns, impacts and risks of climate change or the evidence-based design of marine protection policies. Text Antarc* Antarctic Arctic Climate change PubMed Central (PMC) Antarctic Arctic Scientific Data 9 1 |
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Article Teschke, Katharina Kraan, Casper Kloss, Paul Andresen, Henrike Beermann, Jan Fiorentino, Dario Gusky, Manuela Hansen, Miriam L. S. Konijnenberg, Rebecca Koppe, Roland Pehlke, Hendrik Piepenburg, Dieter Sabbagh, Tawfik Wrede, Alexa Brey, Thomas Dannheim, Jennifer CRITTERBASE, a science-driven data warehouse for marine biota |
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Article |
description |
Data on marine biota exist in many formats and sources, such as published literature, data repositories, and unpublished material. Due to this heterogeneity, information is difficult to find, access and combine, severely impeding its reuse for further scientific analysis and its long-term availability for future generations. To address this challenge, we present CRITTERBASE, a publicly accessible data warehouse and interactive portal that currently hosts quality-controlled and taxonomically standardized presence/absence, abundance, and biomass data for 18,644 samples and 3,664 benthic taxa (2,824 of which at species level). These samples were collected by grabs, underwater imaging or trawls in Arctic, North Sea and Antarctic regions between the years 1800 and 2014. Data were collated from literature, unpublished data, own research and online repositories. All metadata and links to primary sources are included. We envision CRITTERBASE becoming a valuable and continuously expanding tool for a wide range of usages, such as studies of spatio-temporal biodiversity patterns, impacts and risks of climate change or the evidence-based design of marine protection policies. |
format |
Text |
author |
Teschke, Katharina Kraan, Casper Kloss, Paul Andresen, Henrike Beermann, Jan Fiorentino, Dario Gusky, Manuela Hansen, Miriam L. S. Konijnenberg, Rebecca Koppe, Roland Pehlke, Hendrik Piepenburg, Dieter Sabbagh, Tawfik Wrede, Alexa Brey, Thomas Dannheim, Jennifer |
author_facet |
Teschke, Katharina Kraan, Casper Kloss, Paul Andresen, Henrike Beermann, Jan Fiorentino, Dario Gusky, Manuela Hansen, Miriam L. S. Konijnenberg, Rebecca Koppe, Roland Pehlke, Hendrik Piepenburg, Dieter Sabbagh, Tawfik Wrede, Alexa Brey, Thomas Dannheim, Jennifer |
author_sort |
Teschke, Katharina |
title |
CRITTERBASE, a science-driven data warehouse for marine biota |
title_short |
CRITTERBASE, a science-driven data warehouse for marine biota |
title_full |
CRITTERBASE, a science-driven data warehouse for marine biota |
title_fullStr |
CRITTERBASE, a science-driven data warehouse for marine biota |
title_full_unstemmed |
CRITTERBASE, a science-driven data warehouse for marine biota |
title_sort |
critterbase, a science-driven data warehouse for marine biota |
publisher |
Nature Publishing Group UK |
publishDate |
2022 |
url |
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9357058/ http://www.ncbi.nlm.nih.gov/pubmed/35933490 https://doi.org/10.1038/s41597-022-01590-1 |
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Antarctic Arctic |
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Antarctic Arctic |
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Antarc* Antarctic Arctic Climate change |
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Antarc* Antarctic Arctic Climate change |
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Sci Data |
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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9357058/ http://www.ncbi.nlm.nih.gov/pubmed/35933490 http://dx.doi.org/10.1038/s41597-022-01590-1 |
op_rights |
© The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
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CC-BY |
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https://doi.org/10.1038/s41597-022-01590-1 |
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Scientific Data |
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