A 26-year time series of mortality and growth of the Pacific oyster C. gigas recorded along French coasts

We used a compiled data set from a monitoring network of oyster production coordinated by IFREMER (the French Research Institute for the Exploitation of the Sea). This network monitors the growth and mortality of the Pacific oyster Crassostrea gigas along French coasts since 1993. The archive, altho...

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Published in:Scientific Data
Main Authors: Mazaleyrat, Anna, Normand, Julien, Dubroca, Laurent, Fleury, Elodie
Format: Text
Language:English
Published: Nature Publishing Group UK 2022
Subjects:
Data Descriptor
Pacific
Crassostrea gigas
Pacific oyster
Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9271045/
http://www.ncbi.nlm.nih.gov/pubmed/35810155
https://doi.org/10.1038/s41597-022-01511-2
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spelling ftpubmed:oai:pubmedcentral.nih.gov:9271045 2023-05-15T15:58:38+02:00 A 26-year time series of mortality and growth of the Pacific oyster C. gigas recorded along French coasts Mazaleyrat, Anna Normand, Julien Dubroca, Laurent Fleury, Elodie 2022-07-09 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9271045/ http://www.ncbi.nlm.nih.gov/pubmed/35810155 https://doi.org/10.1038/s41597-022-01511-2 en eng Nature Publishing Group UK http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9271045/ http://www.ncbi.nlm.nih.gov/pubmed/35810155 http://dx.doi.org/10.1038/s41597-022-01511-2 © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . CC-BY Sci Data Data Descriptor Text 2022 ftpubmed https://doi.org/10.1038/s41597-022-01511-2 2022-07-31T01:05:06Z We used a compiled data set from a monitoring network of oyster production coordinated by IFREMER (the French Research Institute for the Exploitation of the Sea). This network monitors the growth and mortality of the Pacific oyster Crassostrea gigas along French coasts since 1993. The archive, although publicly available, has been challenging to use due to changes in protocols and little information on metadata. Here, we describe data collection for almost 30 years, cleaning and processing. For 13 locations, we modeled growth and mortality of spat (less than one-year-old individuals) and half-grown oysters (between one and two-year-old individuals) as a function of time to cope with changes in data acquisition frequency, and produced standardized annual growth and cumulative mortality indicators to improve data usability. This improved database is expected to be used by ecologists interested in the evolution of life-cycle indicators of a marine species under the influence of climate change. It can also be valuable for epidemiologists because mortality data traces the emergence and spread of a massive epizootic. Text Crassostrea gigas Pacific oyster PubMed Central (PMC) Pacific Scientific Data 9 1
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Data Descriptor
spellingShingle Data Descriptor
Mazaleyrat, Anna
Normand, Julien
Dubroca, Laurent
Fleury, Elodie
A 26-year time series of mortality and growth of the Pacific oyster C. gigas recorded along French coasts
topic_facet Data Descriptor
description We used a compiled data set from a monitoring network of oyster production coordinated by IFREMER (the French Research Institute for the Exploitation of the Sea). This network monitors the growth and mortality of the Pacific oyster Crassostrea gigas along French coasts since 1993. The archive, although publicly available, has been challenging to use due to changes in protocols and little information on metadata. Here, we describe data collection for almost 30 years, cleaning and processing. For 13 locations, we modeled growth and mortality of spat (less than one-year-old individuals) and half-grown oysters (between one and two-year-old individuals) as a function of time to cope with changes in data acquisition frequency, and produced standardized annual growth and cumulative mortality indicators to improve data usability. This improved database is expected to be used by ecologists interested in the evolution of life-cycle indicators of a marine species under the influence of climate change. It can also be valuable for epidemiologists because mortality data traces the emergence and spread of a massive epizootic.
format Text
author Mazaleyrat, Anna
Normand, Julien
Dubroca, Laurent
Fleury, Elodie
author_facet Mazaleyrat, Anna
Normand, Julien
Dubroca, Laurent
Fleury, Elodie
author_sort Mazaleyrat, Anna
title A 26-year time series of mortality and growth of the Pacific oyster C. gigas recorded along French coasts
title_short A 26-year time series of mortality and growth of the Pacific oyster C. gigas recorded along French coasts
title_full A 26-year time series of mortality and growth of the Pacific oyster C. gigas recorded along French coasts
title_fullStr A 26-year time series of mortality and growth of the Pacific oyster C. gigas recorded along French coasts
title_full_unstemmed A 26-year time series of mortality and growth of the Pacific oyster C. gigas recorded along French coasts
title_sort 26-year time series of mortality and growth of the pacific oyster c. gigas recorded along french coasts
publisher Nature Publishing Group UK
publishDate 2022
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9271045/
http://www.ncbi.nlm.nih.gov/pubmed/35810155
https://doi.org/10.1038/s41597-022-01511-2
geographic Pacific
geographic_facet Pacific
genre Crassostrea gigas
Pacific oyster
genre_facet Crassostrea gigas
Pacific oyster
op_source Sci Data
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9271045/
http://www.ncbi.nlm.nih.gov/pubmed/35810155
http://dx.doi.org/10.1038/s41597-022-01511-2
op_rights © The Author(s) 2022
https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
op_rightsnorm CC-BY
op_doi https://doi.org/10.1038/s41597-022-01511-2
container_title Scientific Data
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