Phytoplankton Surveys in the Arctic Fram Strait Demonstrate the Tiny Eukaryotic Alga Micromonas and Other Picoprasinophytes Contribute to Deep Sea Export

Critical questions exist regarding the abundance and, especially, the export of picophytoplankton (≤2 µm diameter) in the Arctic. These organisms can dominate chlorophyll concentrations in Arctic regions, which are subject to rapid change. The picoeukaryotic prasinophyte Micromonas grows in polar en...

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Published in:Microorganisms
Main Authors: Bachy, Charles, Sudek, Lisa, Choi, Change Jae, Eckmann, Charlotte A., Nöthig, Eva-Maria, Metfies, Katja, Worden, Alexandra Z.
Format: Text
Language:English
Published: MDPI 2022
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Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9144618/
http://www.ncbi.nlm.nih.gov/pubmed/35630405
https://doi.org/10.3390/microorganisms10050961
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spelling ftpubmed:oai:pubmedcentral.nih.gov:9144618 2023-05-15T14:56:37+02:00 Phytoplankton Surveys in the Arctic Fram Strait Demonstrate the Tiny Eukaryotic Alga Micromonas and Other Picoprasinophytes Contribute to Deep Sea Export Bachy, Charles Sudek, Lisa Choi, Change Jae Eckmann, Charlotte A. Nöthig, Eva-Maria Metfies, Katja Worden, Alexandra Z. 2022-05-03 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9144618/ http://www.ncbi.nlm.nih.gov/pubmed/35630405 https://doi.org/10.3390/microorganisms10050961 en eng MDPI http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9144618/ http://www.ncbi.nlm.nih.gov/pubmed/35630405 http://dx.doi.org/10.3390/microorganisms10050961 © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). CC-BY Microorganisms Article Text 2022 ftpubmed https://doi.org/10.3390/microorganisms10050961 2022-06-05T00:53:56Z Critical questions exist regarding the abundance and, especially, the export of picophytoplankton (≤2 µm diameter) in the Arctic. These organisms can dominate chlorophyll concentrations in Arctic regions, which are subject to rapid change. The picoeukaryotic prasinophyte Micromonas grows in polar environments and appears to constitute a large, but variable, proportion of the phytoplankton in these waters. Here, we analyze 81 samples from the upper 100 m of the water column from the Fram Strait collected over multiple years (2009–2015). We also analyze sediment trap samples to examine picophytoplankton contributions to export, using both 18S rRNA gene qPCR and V1-V2 16S rRNA Illumina amplicon sequencing to assess the Micromonas abundance within the broader diversity of photosynthetic eukaryotes based on the phylogenetic placement of plastid-derived 16S amplicons. The material sequenced from the sediment traps in July and September 2010 showed that 11.2 ± 12.4% of plastid-derived amplicons are from picoplanktonic prasinophyte algae and other green lineage (Viridiplantae) members. In the traps, Micromonas dominated (83.6 ± 21.3%) in terms of the overall relative abundance of Viridiplantae amplicons, specifically the species Micromonas polaris. Temporal variations in Micromonas abundances quantified by qPCR were also observed, with higher abundances in the late-July traps and deeper traps. In the photic zone samples, four prasinophyte classes were detected in the amplicon data, with Micromonas again being the dominant prasinophyte, based on the relative abundance (89.4 ± 8.0%), but with two species (M. polaris and M. commoda-like) present. The quantitative PCR assessments showed that the photic zone samples with higher Micromonas abundances (>1000 gene copies per mL) had significantly lower standing stocks of phosphate and nitrate, and a shallower average depth (20 m) than those with fewer Micromonas. This study shows that despite their size, prasinophyte picophytoplankton are exported to the deep sea, and that ... Text Arctic Fram Strait Phytoplankton PubMed Central (PMC) Arctic Microorganisms 10 5 961
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Article
spellingShingle Article
Bachy, Charles
Sudek, Lisa
Choi, Change Jae
Eckmann, Charlotte A.
Nöthig, Eva-Maria
Metfies, Katja
Worden, Alexandra Z.
Phytoplankton Surveys in the Arctic Fram Strait Demonstrate the Tiny Eukaryotic Alga Micromonas and Other Picoprasinophytes Contribute to Deep Sea Export
topic_facet Article
description Critical questions exist regarding the abundance and, especially, the export of picophytoplankton (≤2 µm diameter) in the Arctic. These organisms can dominate chlorophyll concentrations in Arctic regions, which are subject to rapid change. The picoeukaryotic prasinophyte Micromonas grows in polar environments and appears to constitute a large, but variable, proportion of the phytoplankton in these waters. Here, we analyze 81 samples from the upper 100 m of the water column from the Fram Strait collected over multiple years (2009–2015). We also analyze sediment trap samples to examine picophytoplankton contributions to export, using both 18S rRNA gene qPCR and V1-V2 16S rRNA Illumina amplicon sequencing to assess the Micromonas abundance within the broader diversity of photosynthetic eukaryotes based on the phylogenetic placement of plastid-derived 16S amplicons. The material sequenced from the sediment traps in July and September 2010 showed that 11.2 ± 12.4% of plastid-derived amplicons are from picoplanktonic prasinophyte algae and other green lineage (Viridiplantae) members. In the traps, Micromonas dominated (83.6 ± 21.3%) in terms of the overall relative abundance of Viridiplantae amplicons, specifically the species Micromonas polaris. Temporal variations in Micromonas abundances quantified by qPCR were also observed, with higher abundances in the late-July traps and deeper traps. In the photic zone samples, four prasinophyte classes were detected in the amplicon data, with Micromonas again being the dominant prasinophyte, based on the relative abundance (89.4 ± 8.0%), but with two species (M. polaris and M. commoda-like) present. The quantitative PCR assessments showed that the photic zone samples with higher Micromonas abundances (>1000 gene copies per mL) had significantly lower standing stocks of phosphate and nitrate, and a shallower average depth (20 m) than those with fewer Micromonas. This study shows that despite their size, prasinophyte picophytoplankton are exported to the deep sea, and that ...
format Text
author Bachy, Charles
Sudek, Lisa
Choi, Change Jae
Eckmann, Charlotte A.
Nöthig, Eva-Maria
Metfies, Katja
Worden, Alexandra Z.
author_facet Bachy, Charles
Sudek, Lisa
Choi, Change Jae
Eckmann, Charlotte A.
Nöthig, Eva-Maria
Metfies, Katja
Worden, Alexandra Z.
author_sort Bachy, Charles
title Phytoplankton Surveys in the Arctic Fram Strait Demonstrate the Tiny Eukaryotic Alga Micromonas and Other Picoprasinophytes Contribute to Deep Sea Export
title_short Phytoplankton Surveys in the Arctic Fram Strait Demonstrate the Tiny Eukaryotic Alga Micromonas and Other Picoprasinophytes Contribute to Deep Sea Export
title_full Phytoplankton Surveys in the Arctic Fram Strait Demonstrate the Tiny Eukaryotic Alga Micromonas and Other Picoprasinophytes Contribute to Deep Sea Export
title_fullStr Phytoplankton Surveys in the Arctic Fram Strait Demonstrate the Tiny Eukaryotic Alga Micromonas and Other Picoprasinophytes Contribute to Deep Sea Export
title_full_unstemmed Phytoplankton Surveys in the Arctic Fram Strait Demonstrate the Tiny Eukaryotic Alga Micromonas and Other Picoprasinophytes Contribute to Deep Sea Export
title_sort phytoplankton surveys in the arctic fram strait demonstrate the tiny eukaryotic alga micromonas and other picoprasinophytes contribute to deep sea export
publisher MDPI
publishDate 2022
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9144618/
http://www.ncbi.nlm.nih.gov/pubmed/35630405
https://doi.org/10.3390/microorganisms10050961
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http://www.ncbi.nlm.nih.gov/pubmed/35630405
http://dx.doi.org/10.3390/microorganisms10050961
op_rights © 2022 by the authors.
https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
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