Using genomics to guide seed‐sourcing at the right taxonomical level for ecological restoration projects: The complex case of Carex bigelowii s.lat. in Norway

There is a growing demand for ecological restoration using suitable seeds following international standards or national legal demands for local seed‐sourcing. However, before selecting the appropriate geographic origin of seeds, it is vital to explore taxonomic complexity related to the focal taxa....

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Published in:Ecology and Evolution
Main Authors: Westergaard, Kristine Bakke, Kyrkjeeide, Magni Olsen, Brandrud, Marie Kristine
Format: Text
Language:English
Published: John Wiley and Sons Inc. 2021
Subjects:
Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8668773/
http://www.ncbi.nlm.nih.gov/pubmed/34938497
https://doi.org/10.1002/ece3.8350
id ftpubmed:oai:pubmedcentral.nih.gov:8668773
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spelling ftpubmed:oai:pubmedcentral.nih.gov:8668773 2023-05-15T15:53:18+02:00 Using genomics to guide seed‐sourcing at the right taxonomical level for ecological restoration projects: The complex case of Carex bigelowii s.lat. in Norway Westergaard, Kristine Bakke Kyrkjeeide, Magni Olsen Brandrud, Marie Kristine 2021-11-17 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8668773/ http://www.ncbi.nlm.nih.gov/pubmed/34938497 https://doi.org/10.1002/ece3.8350 en eng John Wiley and Sons Inc. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8668773/ http://www.ncbi.nlm.nih.gov/pubmed/34938497 http://dx.doi.org/10.1002/ece3.8350 © 2021 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. CC-BY Ecol Evol Research Articles Text 2021 ftpubmed https://doi.org/10.1002/ece3.8350 2021-12-26T01:30:18Z There is a growing demand for ecological restoration using suitable seeds following international standards or national legal demands for local seed‐sourcing. However, before selecting the appropriate geographic origin of seeds, it is vital to explore taxonomic complexity related to the focal taxa. We used ddRAD‐seq to screen genomic diversity within Carex bigelowii s.lat. focussing on Norway. This species complex is considered a candidate for seeding, but presents considerable morphological, ecological, and genetic variation. The genetic structure of 132 individuals of C. bigelowii s.lat., including Carex nigra as an outgroup, was explored using ordinations, clustering analyses, and a genetic barrier algorithm. Two highly divergent clusters were evident, supporting the recognition of two taxonomic units “C. dacica” and C. bigelowii “subsp. bigelowii”. Previously defined seed‐sourcing regions for C. bigelowii s.lat. did not consider the known taxonomic complexity, and therefore interpreted the overall genetic structure as seed‐sourcing regions, not taxa. We estimated genetic neighborhood sizes within each taxon to be 100–150 km and 300 km, respectively, indicating species‐specific delimitations of local seed‐sourcing regions. Frequent hybrids, local genetic distinctiveness, and suggested ecotypes add complexity to the discussed seed‐sourcing regions. Our results show how genomic screening of diversity and structure in a species complex can alleviate the taxonomic impediment, inform practical questions, and legal requirements related to seed‐sourcing, and together with traditional taxonomic work provide necessary information for a sound management of biodiversity. Text Carex bigelowii PubMed Central (PMC) Norway Ecology and Evolution 11 23 17117 17131
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Research Articles
spellingShingle Research Articles
Westergaard, Kristine Bakke
Kyrkjeeide, Magni Olsen
Brandrud, Marie Kristine
Using genomics to guide seed‐sourcing at the right taxonomical level for ecological restoration projects: The complex case of Carex bigelowii s.lat. in Norway
topic_facet Research Articles
description There is a growing demand for ecological restoration using suitable seeds following international standards or national legal demands for local seed‐sourcing. However, before selecting the appropriate geographic origin of seeds, it is vital to explore taxonomic complexity related to the focal taxa. We used ddRAD‐seq to screen genomic diversity within Carex bigelowii s.lat. focussing on Norway. This species complex is considered a candidate for seeding, but presents considerable morphological, ecological, and genetic variation. The genetic structure of 132 individuals of C. bigelowii s.lat., including Carex nigra as an outgroup, was explored using ordinations, clustering analyses, and a genetic barrier algorithm. Two highly divergent clusters were evident, supporting the recognition of two taxonomic units “C. dacica” and C. bigelowii “subsp. bigelowii”. Previously defined seed‐sourcing regions for C. bigelowii s.lat. did not consider the known taxonomic complexity, and therefore interpreted the overall genetic structure as seed‐sourcing regions, not taxa. We estimated genetic neighborhood sizes within each taxon to be 100–150 km and 300 km, respectively, indicating species‐specific delimitations of local seed‐sourcing regions. Frequent hybrids, local genetic distinctiveness, and suggested ecotypes add complexity to the discussed seed‐sourcing regions. Our results show how genomic screening of diversity and structure in a species complex can alleviate the taxonomic impediment, inform practical questions, and legal requirements related to seed‐sourcing, and together with traditional taxonomic work provide necessary information for a sound management of biodiversity.
format Text
author Westergaard, Kristine Bakke
Kyrkjeeide, Magni Olsen
Brandrud, Marie Kristine
author_facet Westergaard, Kristine Bakke
Kyrkjeeide, Magni Olsen
Brandrud, Marie Kristine
author_sort Westergaard, Kristine Bakke
title Using genomics to guide seed‐sourcing at the right taxonomical level for ecological restoration projects: The complex case of Carex bigelowii s.lat. in Norway
title_short Using genomics to guide seed‐sourcing at the right taxonomical level for ecological restoration projects: The complex case of Carex bigelowii s.lat. in Norway
title_full Using genomics to guide seed‐sourcing at the right taxonomical level for ecological restoration projects: The complex case of Carex bigelowii s.lat. in Norway
title_fullStr Using genomics to guide seed‐sourcing at the right taxonomical level for ecological restoration projects: The complex case of Carex bigelowii s.lat. in Norway
title_full_unstemmed Using genomics to guide seed‐sourcing at the right taxonomical level for ecological restoration projects: The complex case of Carex bigelowii s.lat. in Norway
title_sort using genomics to guide seed‐sourcing at the right taxonomical level for ecological restoration projects: the complex case of carex bigelowii s.lat. in norway
publisher John Wiley and Sons Inc.
publishDate 2021
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8668773/
http://www.ncbi.nlm.nih.gov/pubmed/34938497
https://doi.org/10.1002/ece3.8350
geographic Norway
geographic_facet Norway
genre Carex bigelowii
genre_facet Carex bigelowii
op_source Ecol Evol
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8668773/
http://www.ncbi.nlm.nih.gov/pubmed/34938497
http://dx.doi.org/10.1002/ece3.8350
op_rights © 2021 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd.
https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
op_rightsnorm CC-BY
op_doi https://doi.org/10.1002/ece3.8350
container_title Ecology and Evolution
container_volume 11
container_issue 23
container_start_page 17117
op_container_end_page 17131
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