Calling large indels in 1047 Arabidopsis with IndelEnsembler

• Published in: Nucleic Acids Research
• Main Authors: Liu, Dong-Xu, Rajaby, Ramesh, Wei, Lu-Lu, Zhang, Lei, Yang, Zhi-Quan, Yang, Qing-Yong, Sung, Wing-Kin
• Format: Text
• Language: English
• Published: Oxford University Press 2021
• Subjects: Computational Biology; Indel’; North Sweden
• Online Access: http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8565333/; http://www.ncbi.nlm.nih.gov/pubmed/34643730; https://doi.org/10.1093/nar/gkab904

Large indels greatly impact the observable phenotypes in different organisms including plants and human. Hence, extracting large indels with high precision and sensitivity is important. Here, we developed IndelEnsembler to detect large indels in 1047 Arabidopsis whole-genome sequencing data. IndelEn...