Electron Acceptor Availability Shapes Anaerobically Methane Oxidizing Archaea (ANME) Communities in South Georgia Sediments

Anaerobic methane oxidizing archaea (ANME) mediate anaerobic oxidation of methane (AOM) in marine sediments and are therefore important for controlling atmospheric methane concentrations in the water column and ultimately the atmosphere. Numerous previous studies have revealed that AOM is coupled to...

Full description

Bibliographic Details
Published in:Frontiers in Microbiology
Main Authors: Schnakenberg, Annika, Aromokeye, David A., Kulkarni, Ajinkya, Maier, Lisa, Wunder, Lea C., Richter-Heitmann, Tim, Pape, Thomas, Ristova, Petra Pop, Bühring, Solveig I., Dohrmann, Ingrid, Bohrmann, Gerhard, Kasten, Sabine, Friedrich, Michael W.
Format: Text
Language:English
Published: Frontiers Media S.A. 2021
Subjects:
Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8081031/
https://doi.org/10.3389/fmicb.2021.617280
id ftpubmed:oai:pubmedcentral.nih.gov:8081031
record_format openpolar
spelling ftpubmed:oai:pubmedcentral.nih.gov:8081031 2023-05-15T14:01:22+02:00 Electron Acceptor Availability Shapes Anaerobically Methane Oxidizing Archaea (ANME) Communities in South Georgia Sediments Schnakenberg, Annika Aromokeye, David A. Kulkarni, Ajinkya Maier, Lisa Wunder, Lea C. Richter-Heitmann, Tim Pape, Thomas Ristova, Petra Pop Bühring, Solveig I. Dohrmann, Ingrid Bohrmann, Gerhard Kasten, Sabine Friedrich, Michael W. 2021-04-14 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8081031/ https://doi.org/10.3389/fmicb.2021.617280 en eng Frontiers Media S.A. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8081031/ http://dx.doi.org/10.3389/fmicb.2021.617280 Copyright © 2021 Schnakenberg, Aromokeye, Kulkarni, Maier, Wunder, Richter-Heitmann, Pape, Ristova, Bühring, Dohrmann, Bohrmann, Kasten and Friedrich. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. CC-BY Front Microbiol Microbiology Text 2021 ftpubmed https://doi.org/10.3389/fmicb.2021.617280 2021-05-02T01:04:07Z Anaerobic methane oxidizing archaea (ANME) mediate anaerobic oxidation of methane (AOM) in marine sediments and are therefore important for controlling atmospheric methane concentrations in the water column and ultimately the atmosphere. Numerous previous studies have revealed that AOM is coupled to the reduction of different electron acceptors such as sulfate, nitrate/nitrite or Fe(III)/Mn(IV). However, the influence of electron acceptor availability on the in situ ANME community composition in sediments remains largely unknown. Here, we investigated the electron acceptor availability and compared the microbial in situ communities of three methane-rich locations offshore the sub-Antarctic island South Georgia, by Illumina sequencing and qPCR of mcrA genes. The methanic zone (MZ) sediments of Royal Trough and Church Trough comprised high sulfide concentrations of up to 4 and 19 mM, respectively. In contrast, those of the Cumberland Bay fjord accounted for relatively high concentrations of dissolved iron (up to 186 μM). Whereas the ANME community in the sulfidic sites Church Trough and Royal Trough mainly comprised members of the ANME-1 clade, the order-level clade “ANME-1-related” (Lever and Teske, 2015) was most abundant in the iron-rich site in Cumberland Bay fjord, indicating that the availability of electron acceptors has a strong selective effect on the ANME community. This study shows that potential electron acceptors for methane oxidation may serve as environmental filters to select for the ANME community composition and adds to a better understanding of the global importance of AOM. Text Antarc* Antarctic PubMed Central (PMC) Antarctic Cumberland Bay ENVELOPE(69.052,69.052,-48.781,-48.781) Lever ENVELOPE(-63.608,-63.608,-65.506,-65.506) Frontiers in Microbiology 12
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Microbiology
spellingShingle Microbiology
Schnakenberg, Annika
Aromokeye, David A.
Kulkarni, Ajinkya
Maier, Lisa
Wunder, Lea C.
Richter-Heitmann, Tim
Pape, Thomas
Ristova, Petra Pop
Bühring, Solveig I.
Dohrmann, Ingrid
Bohrmann, Gerhard
Kasten, Sabine
Friedrich, Michael W.
Electron Acceptor Availability Shapes Anaerobically Methane Oxidizing Archaea (ANME) Communities in South Georgia Sediments
topic_facet Microbiology
description Anaerobic methane oxidizing archaea (ANME) mediate anaerobic oxidation of methane (AOM) in marine sediments and are therefore important for controlling atmospheric methane concentrations in the water column and ultimately the atmosphere. Numerous previous studies have revealed that AOM is coupled to the reduction of different electron acceptors such as sulfate, nitrate/nitrite or Fe(III)/Mn(IV). However, the influence of electron acceptor availability on the in situ ANME community composition in sediments remains largely unknown. Here, we investigated the electron acceptor availability and compared the microbial in situ communities of three methane-rich locations offshore the sub-Antarctic island South Georgia, by Illumina sequencing and qPCR of mcrA genes. The methanic zone (MZ) sediments of Royal Trough and Church Trough comprised high sulfide concentrations of up to 4 and 19 mM, respectively. In contrast, those of the Cumberland Bay fjord accounted for relatively high concentrations of dissolved iron (up to 186 μM). Whereas the ANME community in the sulfidic sites Church Trough and Royal Trough mainly comprised members of the ANME-1 clade, the order-level clade “ANME-1-related” (Lever and Teske, 2015) was most abundant in the iron-rich site in Cumberland Bay fjord, indicating that the availability of electron acceptors has a strong selective effect on the ANME community. This study shows that potential electron acceptors for methane oxidation may serve as environmental filters to select for the ANME community composition and adds to a better understanding of the global importance of AOM.
format Text
author Schnakenberg, Annika
Aromokeye, David A.
Kulkarni, Ajinkya
Maier, Lisa
Wunder, Lea C.
Richter-Heitmann, Tim
Pape, Thomas
Ristova, Petra Pop
Bühring, Solveig I.
Dohrmann, Ingrid
Bohrmann, Gerhard
Kasten, Sabine
Friedrich, Michael W.
author_facet Schnakenberg, Annika
Aromokeye, David A.
Kulkarni, Ajinkya
Maier, Lisa
Wunder, Lea C.
Richter-Heitmann, Tim
Pape, Thomas
Ristova, Petra Pop
Bühring, Solveig I.
Dohrmann, Ingrid
Bohrmann, Gerhard
Kasten, Sabine
Friedrich, Michael W.
author_sort Schnakenberg, Annika
title Electron Acceptor Availability Shapes Anaerobically Methane Oxidizing Archaea (ANME) Communities in South Georgia Sediments
title_short Electron Acceptor Availability Shapes Anaerobically Methane Oxidizing Archaea (ANME) Communities in South Georgia Sediments
title_full Electron Acceptor Availability Shapes Anaerobically Methane Oxidizing Archaea (ANME) Communities in South Georgia Sediments
title_fullStr Electron Acceptor Availability Shapes Anaerobically Methane Oxidizing Archaea (ANME) Communities in South Georgia Sediments
title_full_unstemmed Electron Acceptor Availability Shapes Anaerobically Methane Oxidizing Archaea (ANME) Communities in South Georgia Sediments
title_sort electron acceptor availability shapes anaerobically methane oxidizing archaea (anme) communities in south georgia sediments
publisher Frontiers Media S.A.
publishDate 2021
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8081031/
https://doi.org/10.3389/fmicb.2021.617280
long_lat ENVELOPE(69.052,69.052,-48.781,-48.781)
ENVELOPE(-63.608,-63.608,-65.506,-65.506)
geographic Antarctic
Cumberland Bay
Lever
geographic_facet Antarctic
Cumberland Bay
Lever
genre Antarc*
Antarctic
genre_facet Antarc*
Antarctic
op_source Front Microbiol
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8081031/
http://dx.doi.org/10.3389/fmicb.2021.617280
op_rights Copyright © 2021 Schnakenberg, Aromokeye, Kulkarni, Maier, Wunder, Richter-Heitmann, Pape, Ristova, Bühring, Dohrmann, Bohrmann, Kasten and Friedrich.
https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
op_rightsnorm CC-BY
op_doi https://doi.org/10.3389/fmicb.2021.617280
container_title Frontiers in Microbiology
container_volume 12
_version_ 1766271176435302400