Re-Evaluating the Internal Phylogenetic Relationships of Collembola by Means of Mitogenome Data

Collembola are an ancient and early diverging lineage of basal hexapods that occur in virtually all terrestrial habitats on Earth. Phylogenetic relationships between the different orders of Collembola are fiercely debated. Despite a range of studies and the application of both morphological and gene...

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Published in:Genes
Main Authors: Cucini, Claudio, Fanciulli, Pietro P., Frati, Francesco, Convey, Peter, Nardi, Francesco, Carapelli, Antonio
Format: Text
Language:English
Published: MDPI 2020
Subjects:
Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7824276/
http://www.ncbi.nlm.nih.gov/pubmed/33396901
https://doi.org/10.3390/genes12010044
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spelling ftpubmed:oai:pubmedcentral.nih.gov:7824276 2023-05-15T13:47:52+02:00 Re-Evaluating the Internal Phylogenetic Relationships of Collembola by Means of Mitogenome Data Cucini, Claudio Fanciulli, Pietro P. Frati, Francesco Convey, Peter Nardi, Francesco Carapelli, Antonio 2020-12-30 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7824276/ http://www.ncbi.nlm.nih.gov/pubmed/33396901 https://doi.org/10.3390/genes12010044 en eng MDPI http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7824276/ http://www.ncbi.nlm.nih.gov/pubmed/33396901 http://dx.doi.org/10.3390/genes12010044 © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). CC-BY Genes (Basel) Article Text 2020 ftpubmed https://doi.org/10.3390/genes12010044 2021-01-31T01:38:16Z Collembola are an ancient and early diverging lineage of basal hexapods that occur in virtually all terrestrial habitats on Earth. Phylogenetic relationships between the different orders of Collembola are fiercely debated. Despite a range of studies and the application of both morphological and genetic approaches (singly or in combination) to assess the evolutionary relationships of major lineages in the group, no consensus has been reached. Several mitogenome sequences have been published for key taxa of the class (and their number is increasing rapidly). Here, we describe two new Antarctic Collembola mitogenomes and compare all complete or semi-complete springtail mitogenome sequences available on GenBank in terms of both gene order and DNA sequence analyses in a genome evolution and molecular phylogenetic framework. With minor exceptions, we confirm the monophyly of Poduromorpha and Symphypleona sensu stricto (the latter placed at the most basal position in the springtail phylogenetic tree), whereas monophyly of Neelipleona and Entomobryomorpha is only supported when a handful of critical taxa in these two lineages are excluded. Finally, we review gene order models observed in the class, as well as the overall mitochondrial nucleotide composition. Text Antarc* Antarctic Springtail PubMed Central (PMC) Antarctic Genes 12 1 44
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Article
spellingShingle Article
Cucini, Claudio
Fanciulli, Pietro P.
Frati, Francesco
Convey, Peter
Nardi, Francesco
Carapelli, Antonio
Re-Evaluating the Internal Phylogenetic Relationships of Collembola by Means of Mitogenome Data
topic_facet Article
description Collembola are an ancient and early diverging lineage of basal hexapods that occur in virtually all terrestrial habitats on Earth. Phylogenetic relationships between the different orders of Collembola are fiercely debated. Despite a range of studies and the application of both morphological and genetic approaches (singly or in combination) to assess the evolutionary relationships of major lineages in the group, no consensus has been reached. Several mitogenome sequences have been published for key taxa of the class (and their number is increasing rapidly). Here, we describe two new Antarctic Collembola mitogenomes and compare all complete or semi-complete springtail mitogenome sequences available on GenBank in terms of both gene order and DNA sequence analyses in a genome evolution and molecular phylogenetic framework. With minor exceptions, we confirm the monophyly of Poduromorpha and Symphypleona sensu stricto (the latter placed at the most basal position in the springtail phylogenetic tree), whereas monophyly of Neelipleona and Entomobryomorpha is only supported when a handful of critical taxa in these two lineages are excluded. Finally, we review gene order models observed in the class, as well as the overall mitochondrial nucleotide composition.
format Text
author Cucini, Claudio
Fanciulli, Pietro P.
Frati, Francesco
Convey, Peter
Nardi, Francesco
Carapelli, Antonio
author_facet Cucini, Claudio
Fanciulli, Pietro P.
Frati, Francesco
Convey, Peter
Nardi, Francesco
Carapelli, Antonio
author_sort Cucini, Claudio
title Re-Evaluating the Internal Phylogenetic Relationships of Collembola by Means of Mitogenome Data
title_short Re-Evaluating the Internal Phylogenetic Relationships of Collembola by Means of Mitogenome Data
title_full Re-Evaluating the Internal Phylogenetic Relationships of Collembola by Means of Mitogenome Data
title_fullStr Re-Evaluating the Internal Phylogenetic Relationships of Collembola by Means of Mitogenome Data
title_full_unstemmed Re-Evaluating the Internal Phylogenetic Relationships of Collembola by Means of Mitogenome Data
title_sort re-evaluating the internal phylogenetic relationships of collembola by means of mitogenome data
publisher MDPI
publishDate 2020
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7824276/
http://www.ncbi.nlm.nih.gov/pubmed/33396901
https://doi.org/10.3390/genes12010044
geographic Antarctic
geographic_facet Antarctic
genre Antarc*
Antarctic
Springtail
genre_facet Antarc*
Antarctic
Springtail
op_source Genes (Basel)
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7824276/
http://www.ncbi.nlm.nih.gov/pubmed/33396901
http://dx.doi.org/10.3390/genes12010044
op_rights © 2020 by the authors.
Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
op_rightsnorm CC-BY
op_doi https://doi.org/10.3390/genes12010044
container_title Genes
container_volume 12
container_issue 1
container_start_page 44
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