The complete mitochondrial genome of Gadus chalcogramma and phylogenetic analysis
Here, we report the complete mitochondrial genome sequence of Alaska Pollock, Gadus chalcogramma. The genome sequence was obtained via long PCR reactions using universal primer sets for the fish mitochondrial genome. The total length of mitochondrial genome was 16,571 bp, consisting of 13 protein-co...
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ftpubmed:oai:pubmedcentral.nih.gov:7800057 2023-05-15T13:09:22+02:00 The complete mitochondrial genome of Gadus chalcogramma and phylogenetic analysis Sim, Han-Kyeol Yu, Jeong-Nam Jin, Deuk-Hee 2018-04-12 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800057/ http://www.ncbi.nlm.nih.gov/pubmed/33474203 https://doi.org/10.1080/23802359.2018.1462118 en eng Taylor & Francis http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800057/ http://www.ncbi.nlm.nih.gov/pubmed/33474203 http://dx.doi.org/10.1080/23802359.2018.1462118 © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ CC-BY Mitochondrial DNA B Resour Mitogenome Announcement Text 2018 ftpubmed https://doi.org/10.1080/23802359.2018.1462118 2021-01-24T01:22:32Z Here, we report the complete mitochondrial genome sequence of Alaska Pollock, Gadus chalcogramma. The genome sequence was obtained via long PCR reactions using universal primer sets for the fish mitochondrial genome. The total length of mitochondrial genome was 16,571 bp, consisting of 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and one control region (D-loop). Except for ND6 and eight tRNA genes, all of the other mitochondrial genes were encoded on the heavy strand. The NJ tree of the combined 13 protein-coding gene sequences of Gadus chalcogramma possesses a relatively closer relationship with the Okhotsk Sea Pollock (Gadus chalcogrammus). Our complete mitochondrial genome will be valuable resources for phylogeny, genetics, and conservation of the Gadus chalcogramma in Korea. Text alaska pollock okhotsk sea Alaska PubMed Central (PMC) Okhotsk Mitochondrial DNA Part B 3 1 454 455 |
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PubMed Central (PMC) |
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ftpubmed |
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English |
topic |
Mitogenome Announcement |
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Mitogenome Announcement Sim, Han-Kyeol Yu, Jeong-Nam Jin, Deuk-Hee The complete mitochondrial genome of Gadus chalcogramma and phylogenetic analysis |
topic_facet |
Mitogenome Announcement |
description |
Here, we report the complete mitochondrial genome sequence of Alaska Pollock, Gadus chalcogramma. The genome sequence was obtained via long PCR reactions using universal primer sets for the fish mitochondrial genome. The total length of mitochondrial genome was 16,571 bp, consisting of 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and one control region (D-loop). Except for ND6 and eight tRNA genes, all of the other mitochondrial genes were encoded on the heavy strand. The NJ tree of the combined 13 protein-coding gene sequences of Gadus chalcogramma possesses a relatively closer relationship with the Okhotsk Sea Pollock (Gadus chalcogrammus). Our complete mitochondrial genome will be valuable resources for phylogeny, genetics, and conservation of the Gadus chalcogramma in Korea. |
format |
Text |
author |
Sim, Han-Kyeol Yu, Jeong-Nam Jin, Deuk-Hee |
author_facet |
Sim, Han-Kyeol Yu, Jeong-Nam Jin, Deuk-Hee |
author_sort |
Sim, Han-Kyeol |
title |
The complete mitochondrial genome of Gadus chalcogramma and phylogenetic analysis |
title_short |
The complete mitochondrial genome of Gadus chalcogramma and phylogenetic analysis |
title_full |
The complete mitochondrial genome of Gadus chalcogramma and phylogenetic analysis |
title_fullStr |
The complete mitochondrial genome of Gadus chalcogramma and phylogenetic analysis |
title_full_unstemmed |
The complete mitochondrial genome of Gadus chalcogramma and phylogenetic analysis |
title_sort |
complete mitochondrial genome of gadus chalcogramma and phylogenetic analysis |
publisher |
Taylor & Francis |
publishDate |
2018 |
url |
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800057/ http://www.ncbi.nlm.nih.gov/pubmed/33474203 https://doi.org/10.1080/23802359.2018.1462118 |
geographic |
Okhotsk |
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Okhotsk |
genre |
alaska pollock okhotsk sea Alaska |
genre_facet |
alaska pollock okhotsk sea Alaska |
op_source |
Mitochondrial DNA B Resour |
op_relation |
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7800057/ http://www.ncbi.nlm.nih.gov/pubmed/33474203 http://dx.doi.org/10.1080/23802359.2018.1462118 |
op_rights |
© 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.http://creativecommons.org/licenses/by/4.0/ |
op_rightsnorm |
CC-BY |
op_doi |
https://doi.org/10.1080/23802359.2018.1462118 |
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Mitochondrial DNA Part B |
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3 |
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1 |
container_start_page |
454 |
op_container_end_page |
455 |
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1766174470162087936 |