Production of Lipopeptide Biosurfactant by a Hydrocarbon-Degrading Antarctic Rhodococcus

Rhodococci are renowned for their great metabolic repertoire partly because of their numerous putative pathways for large number of specialized metabolites such as biosurfactant. Screening and genome-based assessment for the capacity to produce surface-active molecules was conducted on Rhodococcus s...

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Published in:International Journal of Molecular Sciences
Main Authors: Habib, Syahir, Ahmad, Siti Aqlima, Wan Johari, Wan Lutfi, Abd Shukor, Mohd Yunus, Alias, Siti Aisyah, Smykla, Jerzy, Saruni, Nurul Hani, Abdul Razak, Nur Syafiqah, Yasid, Nur Adeela
Format: Text
Language:English
Published: MDPI 2020
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Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7504157/
https://doi.org/10.3390/ijms21176138
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spelling ftpubmed:oai:pubmedcentral.nih.gov:7504157 2023-05-15T13:42:08+02:00 Production of Lipopeptide Biosurfactant by a Hydrocarbon-Degrading Antarctic Rhodococcus Habib, Syahir Ahmad, Siti Aqlima Wan Johari, Wan Lutfi Abd Shukor, Mohd Yunus Alias, Siti Aisyah Smykla, Jerzy Saruni, Nurul Hani Abdul Razak, Nur Syafiqah Yasid, Nur Adeela 2020-08-26 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7504157/ https://doi.org/10.3390/ijms21176138 en eng MDPI http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7504157/ http://dx.doi.org/10.3390/ijms21176138 © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). CC-BY Int J Mol Sci Article Text 2020 ftpubmed https://doi.org/10.3390/ijms21176138 2020-09-27T00:38:24Z Rhodococci are renowned for their great metabolic repertoire partly because of their numerous putative pathways for large number of specialized metabolites such as biosurfactant. Screening and genome-based assessment for the capacity to produce surface-active molecules was conducted on Rhodococcus sp. ADL36, a diesel-degrading Antarctic bacterium. The strain showed a positive bacterial adhesion to hydrocarbon (BATH) assay, drop collapse test, oil displacement activity, microplate assay, maximal emulsification index at 45% and ability to reduce water surface tension to < 30 mN/m. The evaluation of the cell-free supernatant demonstrated its high stability across the temperature, pH and salinity gradient although no correlation was found between the surface and emulsification activity. Based on the positive relationship between the assessment of macromolecules content and infrared analysis, the extracted biosurfactant synthesized was classified as a lipopeptide. Prediction of the secondary metabolites in the non-ribosomal peptide synthetase (NRPS) clusters suggested the likelihood of the surface-active lipopeptide production in the strain’s genomic data. This is the third report of surface-active lipopeptide producers from this phylotype and the first from the polar region. The lipopeptide synthesized by ADL36 has the prospect to be an Antarctic remediation tool while furnishing a distinctive natural product for biotechnological application and research. Text Antarc* Antarctic PubMed Central (PMC) Antarctic International Journal of Molecular Sciences 21 17 6138
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Article
spellingShingle Article
Habib, Syahir
Ahmad, Siti Aqlima
Wan Johari, Wan Lutfi
Abd Shukor, Mohd Yunus
Alias, Siti Aisyah
Smykla, Jerzy
Saruni, Nurul Hani
Abdul Razak, Nur Syafiqah
Yasid, Nur Adeela
Production of Lipopeptide Biosurfactant by a Hydrocarbon-Degrading Antarctic Rhodococcus
topic_facet Article
description Rhodococci are renowned for their great metabolic repertoire partly because of their numerous putative pathways for large number of specialized metabolites such as biosurfactant. Screening and genome-based assessment for the capacity to produce surface-active molecules was conducted on Rhodococcus sp. ADL36, a diesel-degrading Antarctic bacterium. The strain showed a positive bacterial adhesion to hydrocarbon (BATH) assay, drop collapse test, oil displacement activity, microplate assay, maximal emulsification index at 45% and ability to reduce water surface tension to < 30 mN/m. The evaluation of the cell-free supernatant demonstrated its high stability across the temperature, pH and salinity gradient although no correlation was found between the surface and emulsification activity. Based on the positive relationship between the assessment of macromolecules content and infrared analysis, the extracted biosurfactant synthesized was classified as a lipopeptide. Prediction of the secondary metabolites in the non-ribosomal peptide synthetase (NRPS) clusters suggested the likelihood of the surface-active lipopeptide production in the strain’s genomic data. This is the third report of surface-active lipopeptide producers from this phylotype and the first from the polar region. The lipopeptide synthesized by ADL36 has the prospect to be an Antarctic remediation tool while furnishing a distinctive natural product for biotechnological application and research.
format Text
author Habib, Syahir
Ahmad, Siti Aqlima
Wan Johari, Wan Lutfi
Abd Shukor, Mohd Yunus
Alias, Siti Aisyah
Smykla, Jerzy
Saruni, Nurul Hani
Abdul Razak, Nur Syafiqah
Yasid, Nur Adeela
author_facet Habib, Syahir
Ahmad, Siti Aqlima
Wan Johari, Wan Lutfi
Abd Shukor, Mohd Yunus
Alias, Siti Aisyah
Smykla, Jerzy
Saruni, Nurul Hani
Abdul Razak, Nur Syafiqah
Yasid, Nur Adeela
author_sort Habib, Syahir
title Production of Lipopeptide Biosurfactant by a Hydrocarbon-Degrading Antarctic Rhodococcus
title_short Production of Lipopeptide Biosurfactant by a Hydrocarbon-Degrading Antarctic Rhodococcus
title_full Production of Lipopeptide Biosurfactant by a Hydrocarbon-Degrading Antarctic Rhodococcus
title_fullStr Production of Lipopeptide Biosurfactant by a Hydrocarbon-Degrading Antarctic Rhodococcus
title_full_unstemmed Production of Lipopeptide Biosurfactant by a Hydrocarbon-Degrading Antarctic Rhodococcus
title_sort production of lipopeptide biosurfactant by a hydrocarbon-degrading antarctic rhodococcus
publisher MDPI
publishDate 2020
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7504157/
https://doi.org/10.3390/ijms21176138
geographic Antarctic
geographic_facet Antarctic
genre Antarc*
Antarctic
genre_facet Antarc*
Antarctic
op_source Int J Mol Sci
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7504157/
http://dx.doi.org/10.3390/ijms21176138
op_rights © 2020 by the authors.
Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
op_rightsnorm CC-BY
op_doi https://doi.org/10.3390/ijms21176138
container_title International Journal of Molecular Sciences
container_volume 21
container_issue 17
container_start_page 6138
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