Machine-learning strategies for testing patterns of morphological variation in small samples: sexual dimorphism in gray wolf (Canis lupus) crania

BACKGROUND: Studies of mammalian sexual dimorphism have traditionally involved the measurement of selected dimensions of particular skeletal elements and use of single data-analysis procedures. Consequently, such studies have been limited by a variety of both practical and conceptual constraints. To...

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Published in:BMC Biology
Main Authors: MacLeod, Norman, Kolska Horwitz, Liora
Format: Text
Language:English
Published: BioMed Central 2020
Subjects:
Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7470621/
http://www.ncbi.nlm.nih.gov/pubmed/32883273
https://doi.org/10.1186/s12915-020-00832-1
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spelling ftpubmed:oai:pubmedcentral.nih.gov:7470621 2023-05-15T15:49:57+02:00 Machine-learning strategies for testing patterns of morphological variation in small samples: sexual dimorphism in gray wolf (Canis lupus) crania MacLeod, Norman Kolska Horwitz, Liora 2020-09-03 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7470621/ http://www.ncbi.nlm.nih.gov/pubmed/32883273 https://doi.org/10.1186/s12915-020-00832-1 en eng BioMed Central http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7470621/ http://www.ncbi.nlm.nih.gov/pubmed/32883273 http://dx.doi.org/10.1186/s12915-020-00832-1 © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. CC0 PDM CC-BY BMC Biol Research Article Text 2020 ftpubmed https://doi.org/10.1186/s12915-020-00832-1 2020-09-13T00:21:25Z BACKGROUND: Studies of mammalian sexual dimorphism have traditionally involved the measurement of selected dimensions of particular skeletal elements and use of single data-analysis procedures. Consequently, such studies have been limited by a variety of both practical and conceptual constraints. To compare and contrast what might be gained from a more exploratory, multifactorial approach to the quantitative assessment of form-variation, images of a small sample of modern Israeli gray wolf (Canis lupus) crania were analyzed via elliptical Fourier analysis of cranial outlines, a Naïve Bayes machine-learning approach to the analysis of these same outline data, and a deep-learning analysis of whole images in which all aspects of these cranial morphologies were represented. The statistical significance and stability of each discriminant result were tested using bootstrap and jackknife procedures. RESULTS: Our results reveal no evidence for statistically significant sexual size dimorphism, but significant sex-mediated shape dimorphism. These are consistent with the findings of prior wolf sexual dimorphism studies and extend these studies by identifying new aspects of dimorphic variation. Additionally, our results suggest that shape-based sexual dimorphism in the C. lupus cranial complex may be more widespread morphologically than had been appreciated by previous researchers. CONCLUSION: Our results suggest that size and shape dimorphism can be detected in small samples and may be dissociated in mammalian morphologies. This result is particularly noteworthy in that it implies there may be a need to refine allometric hypothesis tests that seek to account for phenotypic sexual dimorphism. The methods we employed in this investigation are fully generalizable and can be applied to a wide range of biological materials and could facilitate the rapid evaluation of a diverse array of morphological/phenomic hypotheses. Text Canis lupus gray wolf PubMed Central (PMC) BMC Biology 18 1
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Research Article
spellingShingle Research Article
MacLeod, Norman
Kolska Horwitz, Liora
Machine-learning strategies for testing patterns of morphological variation in small samples: sexual dimorphism in gray wolf (Canis lupus) crania
topic_facet Research Article
description BACKGROUND: Studies of mammalian sexual dimorphism have traditionally involved the measurement of selected dimensions of particular skeletal elements and use of single data-analysis procedures. Consequently, such studies have been limited by a variety of both practical and conceptual constraints. To compare and contrast what might be gained from a more exploratory, multifactorial approach to the quantitative assessment of form-variation, images of a small sample of modern Israeli gray wolf (Canis lupus) crania were analyzed via elliptical Fourier analysis of cranial outlines, a Naïve Bayes machine-learning approach to the analysis of these same outline data, and a deep-learning analysis of whole images in which all aspects of these cranial morphologies were represented. The statistical significance and stability of each discriminant result were tested using bootstrap and jackknife procedures. RESULTS: Our results reveal no evidence for statistically significant sexual size dimorphism, but significant sex-mediated shape dimorphism. These are consistent with the findings of prior wolf sexual dimorphism studies and extend these studies by identifying new aspects of dimorphic variation. Additionally, our results suggest that shape-based sexual dimorphism in the C. lupus cranial complex may be more widespread morphologically than had been appreciated by previous researchers. CONCLUSION: Our results suggest that size and shape dimorphism can be detected in small samples and may be dissociated in mammalian morphologies. This result is particularly noteworthy in that it implies there may be a need to refine allometric hypothesis tests that seek to account for phenotypic sexual dimorphism. The methods we employed in this investigation are fully generalizable and can be applied to a wide range of biological materials and could facilitate the rapid evaluation of a diverse array of morphological/phenomic hypotheses.
format Text
author MacLeod, Norman
Kolska Horwitz, Liora
author_facet MacLeod, Norman
Kolska Horwitz, Liora
author_sort MacLeod, Norman
title Machine-learning strategies for testing patterns of morphological variation in small samples: sexual dimorphism in gray wolf (Canis lupus) crania
title_short Machine-learning strategies for testing patterns of morphological variation in small samples: sexual dimorphism in gray wolf (Canis lupus) crania
title_full Machine-learning strategies for testing patterns of morphological variation in small samples: sexual dimorphism in gray wolf (Canis lupus) crania
title_fullStr Machine-learning strategies for testing patterns of morphological variation in small samples: sexual dimorphism in gray wolf (Canis lupus) crania
title_full_unstemmed Machine-learning strategies for testing patterns of morphological variation in small samples: sexual dimorphism in gray wolf (Canis lupus) crania
title_sort machine-learning strategies for testing patterns of morphological variation in small samples: sexual dimorphism in gray wolf (canis lupus) crania
publisher BioMed Central
publishDate 2020
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7470621/
http://www.ncbi.nlm.nih.gov/pubmed/32883273
https://doi.org/10.1186/s12915-020-00832-1
genre Canis lupus
gray wolf
genre_facet Canis lupus
gray wolf
op_source BMC Biol
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7470621/
http://www.ncbi.nlm.nih.gov/pubmed/32883273
http://dx.doi.org/10.1186/s12915-020-00832-1
op_rights © The Author(s) 2020
Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
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CC-BY
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