A glimpse into the biogeography, seasonality, and ecological functions of arctic marine Oomycota

High-latitude environments are warming, leading to changes in biological diversity patterns of taxa. Oomycota are a group of fungal-like organisms that comprise a major clade of eukaryotic life and are parasites of fish, agricultural crops, and algae. The diversity, functionality, and distribution o...

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Published in:IMA Fungus
Main Authors: Hassett, Brandon T., Thines, Marco, Buaya, Anthony, Ploch, Sebastian, Gradinger, R.
Format: Text
Language:English
Published: BioMed Central 2019
Subjects:
Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7325649/
https://doi.org/10.1186/s43008-019-0006-6
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spelling ftpubmed:oai:pubmedcentral.nih.gov:7325649 2023-05-15T14:18:04+02:00 A glimpse into the biogeography, seasonality, and ecological functions of arctic marine Oomycota Hassett, Brandon T. Thines, Marco Buaya, Anthony Ploch, Sebastian Gradinger, R. 2019-06-20 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7325649/ https://doi.org/10.1186/s43008-019-0006-6 en eng BioMed Central http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7325649/ http://dx.doi.org/10.1186/s43008-019-0006-6 © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. CC0 PDM CC-BY IMA Fungus Research Text 2019 ftpubmed https://doi.org/10.1186/s43008-019-0006-6 2020-07-12T00:23:33Z High-latitude environments are warming, leading to changes in biological diversity patterns of taxa. Oomycota are a group of fungal-like organisms that comprise a major clade of eukaryotic life and are parasites of fish, agricultural crops, and algae. The diversity, functionality, and distribution of these organisms are essentially unknown in the Arctic marine environment. Thus, it was our aim to conduct a first screening, using a functional gene assay and high-throughput sequencing of two gene regions within the 18S rRNA locus to examine the diversity, richness, and phylogeny of marine Oomycota within Arctic sediment, seawater, and sea ice. We detected Oomycota at every site sampled and identified regionally localized taxa, as well as taxa that existed in both Alaska and Svalbard. While the recently described diatom parasite Miracula helgolandica made up about 50% of the oomycete reads found, many lineages were observed that could not be assigned to known species, including several that clustered with another recently described diatom parasite, Olpidiopsis drebesii. Across the Arctic, Oomycota comprised a maximum of 6% of the entire eukaryotic microbial community in Barrow, Alaska May sediment and 10% in sea ice near the Svalbard archipelago. We found Arctic marine Oomycota encode numerous genes involved in parasitism and carbon cycling processes. Ultimately, these data suggest that Arctic marine Oomycota are a reservoir of uncharacterized biodiversity, the majority of which are probably parasites of diatoms, while others might cryptically cycle carbon or interface other unknown ecological processes. As the Arctic continues to warm, lower-latitude Oomycota might migrate into the Arctic Ocean and parasitize non-coevolved hosts, leading to incalculable shifts in the primary producer community. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s43008-019-0006-6) contains supplementary material, which is available to authorized users. Text Archipelago Arctic Arctic Ocean Barrow Sea ice Svalbard Alaska PubMed Central (PMC) Arctic Arctic Ocean Svalbard Svalbard Archipelago IMA Fungus 10 1
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Research
spellingShingle Research
Hassett, Brandon T.
Thines, Marco
Buaya, Anthony
Ploch, Sebastian
Gradinger, R.
A glimpse into the biogeography, seasonality, and ecological functions of arctic marine Oomycota
topic_facet Research
description High-latitude environments are warming, leading to changes in biological diversity patterns of taxa. Oomycota are a group of fungal-like organisms that comprise a major clade of eukaryotic life and are parasites of fish, agricultural crops, and algae. The diversity, functionality, and distribution of these organisms are essentially unknown in the Arctic marine environment. Thus, it was our aim to conduct a first screening, using a functional gene assay and high-throughput sequencing of two gene regions within the 18S rRNA locus to examine the diversity, richness, and phylogeny of marine Oomycota within Arctic sediment, seawater, and sea ice. We detected Oomycota at every site sampled and identified regionally localized taxa, as well as taxa that existed in both Alaska and Svalbard. While the recently described diatom parasite Miracula helgolandica made up about 50% of the oomycete reads found, many lineages were observed that could not be assigned to known species, including several that clustered with another recently described diatom parasite, Olpidiopsis drebesii. Across the Arctic, Oomycota comprised a maximum of 6% of the entire eukaryotic microbial community in Barrow, Alaska May sediment and 10% in sea ice near the Svalbard archipelago. We found Arctic marine Oomycota encode numerous genes involved in parasitism and carbon cycling processes. Ultimately, these data suggest that Arctic marine Oomycota are a reservoir of uncharacterized biodiversity, the majority of which are probably parasites of diatoms, while others might cryptically cycle carbon or interface other unknown ecological processes. As the Arctic continues to warm, lower-latitude Oomycota might migrate into the Arctic Ocean and parasitize non-coevolved hosts, leading to incalculable shifts in the primary producer community. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s43008-019-0006-6) contains supplementary material, which is available to authorized users.
format Text
author Hassett, Brandon T.
Thines, Marco
Buaya, Anthony
Ploch, Sebastian
Gradinger, R.
author_facet Hassett, Brandon T.
Thines, Marco
Buaya, Anthony
Ploch, Sebastian
Gradinger, R.
author_sort Hassett, Brandon T.
title A glimpse into the biogeography, seasonality, and ecological functions of arctic marine Oomycota
title_short A glimpse into the biogeography, seasonality, and ecological functions of arctic marine Oomycota
title_full A glimpse into the biogeography, seasonality, and ecological functions of arctic marine Oomycota
title_fullStr A glimpse into the biogeography, seasonality, and ecological functions of arctic marine Oomycota
title_full_unstemmed A glimpse into the biogeography, seasonality, and ecological functions of arctic marine Oomycota
title_sort glimpse into the biogeography, seasonality, and ecological functions of arctic marine oomycota
publisher BioMed Central
publishDate 2019
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7325649/
https://doi.org/10.1186/s43008-019-0006-6
geographic Arctic
Arctic Ocean
Svalbard
Svalbard Archipelago
geographic_facet Arctic
Arctic Ocean
Svalbard
Svalbard Archipelago
genre Archipelago
Arctic
Arctic Ocean
Barrow
Sea ice
Svalbard
Alaska
genre_facet Archipelago
Arctic
Arctic Ocean
Barrow
Sea ice
Svalbard
Alaska
op_source IMA Fungus
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7325649/
http://dx.doi.org/10.1186/s43008-019-0006-6
op_rights © The Author(s) 2019
Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
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