Calcium-Induced Activity and Folding of a Repeat in Toxin Lipase from Antarctic Pseudomonas fluorescens Strain AMS8

It is hypothesized that the Ca(2+) ions were involved in the activity, folding and stabilization of many protein structures. Many of these proteins contain repeat in toxin (RTX) motifs. AMS8 lipase from Antarctic Pseudomonas fluorescens strain AMS8 was found to have three RTX motifs. So, this resear...

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Published in:Toxins
Main Authors: Ali, Nur Shidaa Mohd, Salleh, Abu Bakar, Rahman, Raja Noor Zaliha Raja Abd, Leow, Thean Chor, Ali, Mohd Shukuri Mohamad
Format: Text
Language:English
Published: MDPI 2020
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Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7020413/
http://www.ncbi.nlm.nih.gov/pubmed/31906409
https://doi.org/10.3390/toxins12010027
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spelling ftpubmed:oai:pubmedcentral.nih.gov:7020413 2023-05-15T13:49:15+02:00 Calcium-Induced Activity and Folding of a Repeat in Toxin Lipase from Antarctic Pseudomonas fluorescens Strain AMS8 Ali, Nur Shidaa Mohd Salleh, Abu Bakar Rahman, Raja Noor Zaliha Raja Abd Leow, Thean Chor Ali, Mohd Shukuri Mohamad 2020-01-01 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7020413/ http://www.ncbi.nlm.nih.gov/pubmed/31906409 https://doi.org/10.3390/toxins12010027 en eng MDPI http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7020413/ http://www.ncbi.nlm.nih.gov/pubmed/31906409 http://dx.doi.org/10.3390/toxins12010027 © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). CC-BY Article Text 2020 ftpubmed https://doi.org/10.3390/toxins12010027 2020-03-15T01:22:45Z It is hypothesized that the Ca(2+) ions were involved in the activity, folding and stabilization of many protein structures. Many of these proteins contain repeat in toxin (RTX) motifs. AMS8 lipase from Antarctic Pseudomonas fluorescens strain AMS8 was found to have three RTX motifs. So, this research aimed to examine the influence of Ca(2+) ion towards the activity and folding of AMS8 lipase through various biophysical characterizations. The results showed that CaCl(2) increased lipase activity. The far-UV circular dichroism (CD) and Fourier-transform infrared (FTIR) analysis suggested that the secondary structure content was improved with the addition of CaCl(2). Fluorescence spectroscopy analysis showed that the presence of CaCl(2) increased protein folding and compactness. Dynamic light scattering (DLS) analysis suggested that AMS8 lipase became aggregated at a high concentration of CaCl(2).The binding constant (K(d)) value from the isothermal titration calorimetry (ITC) analysis proved that the Ca(2+) ion was tightly bound to the AMS8 lipase. In conclusion, Ca(2+) ions play crucial roles in the activity and folding of the AMS8 lipase. Calcium binding to RTX nonapeptide repeats sequences will induced the formation and folding of the RTX parallel β-roll motif repeat structure. Text Antarc* Antarctic PubMed Central (PMC) Antarctic Toxins 12 1 27
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Article
spellingShingle Article
Ali, Nur Shidaa Mohd
Salleh, Abu Bakar
Rahman, Raja Noor Zaliha Raja Abd
Leow, Thean Chor
Ali, Mohd Shukuri Mohamad
Calcium-Induced Activity and Folding of a Repeat in Toxin Lipase from Antarctic Pseudomonas fluorescens Strain AMS8
topic_facet Article
description It is hypothesized that the Ca(2+) ions were involved in the activity, folding and stabilization of many protein structures. Many of these proteins contain repeat in toxin (RTX) motifs. AMS8 lipase from Antarctic Pseudomonas fluorescens strain AMS8 was found to have three RTX motifs. So, this research aimed to examine the influence of Ca(2+) ion towards the activity and folding of AMS8 lipase through various biophysical characterizations. The results showed that CaCl(2) increased lipase activity. The far-UV circular dichroism (CD) and Fourier-transform infrared (FTIR) analysis suggested that the secondary structure content was improved with the addition of CaCl(2). Fluorescence spectroscopy analysis showed that the presence of CaCl(2) increased protein folding and compactness. Dynamic light scattering (DLS) analysis suggested that AMS8 lipase became aggregated at a high concentration of CaCl(2).The binding constant (K(d)) value from the isothermal titration calorimetry (ITC) analysis proved that the Ca(2+) ion was tightly bound to the AMS8 lipase. In conclusion, Ca(2+) ions play crucial roles in the activity and folding of the AMS8 lipase. Calcium binding to RTX nonapeptide repeats sequences will induced the formation and folding of the RTX parallel β-roll motif repeat structure.
format Text
author Ali, Nur Shidaa Mohd
Salleh, Abu Bakar
Rahman, Raja Noor Zaliha Raja Abd
Leow, Thean Chor
Ali, Mohd Shukuri Mohamad
author_facet Ali, Nur Shidaa Mohd
Salleh, Abu Bakar
Rahman, Raja Noor Zaliha Raja Abd
Leow, Thean Chor
Ali, Mohd Shukuri Mohamad
author_sort Ali, Nur Shidaa Mohd
title Calcium-Induced Activity and Folding of a Repeat in Toxin Lipase from Antarctic Pseudomonas fluorescens Strain AMS8
title_short Calcium-Induced Activity and Folding of a Repeat in Toxin Lipase from Antarctic Pseudomonas fluorescens Strain AMS8
title_full Calcium-Induced Activity and Folding of a Repeat in Toxin Lipase from Antarctic Pseudomonas fluorescens Strain AMS8
title_fullStr Calcium-Induced Activity and Folding of a Repeat in Toxin Lipase from Antarctic Pseudomonas fluorescens Strain AMS8
title_full_unstemmed Calcium-Induced Activity and Folding of a Repeat in Toxin Lipase from Antarctic Pseudomonas fluorescens Strain AMS8
title_sort calcium-induced activity and folding of a repeat in toxin lipase from antarctic pseudomonas fluorescens strain ams8
publisher MDPI
publishDate 2020
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7020413/
http://www.ncbi.nlm.nih.gov/pubmed/31906409
https://doi.org/10.3390/toxins12010027
geographic Antarctic
geographic_facet Antarctic
genre Antarc*
Antarctic
genre_facet Antarc*
Antarctic
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7020413/
http://www.ncbi.nlm.nih.gov/pubmed/31906409
http://dx.doi.org/10.3390/toxins12010027
op_rights © 2020 by the authors.
Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
op_rightsnorm CC-BY
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