Unbiased atomistic insight in the competing nucleation mechanisms of methane hydrates

Methane hydrates have important industrial and climate implications, yet their formation via homogeneous nucleation under natural, moderate conditions is poorly understood. Obtaining such understanding could lead to improved control of crystallization, as well as insight into polymorph selection in...

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Published in:Proceedings of the National Academy of Sciences
Main Authors: Arjun, Berendsen, Thom A., Bolhuis, Peter G.
Format: Text
Language:English
Published: National Academy of Sciences 2019
Subjects:
Online Access:http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6765301/
http://www.ncbi.nlm.nih.gov/pubmed/31501333
https://doi.org/10.1073/pnas.1906502116
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spelling ftpubmed:oai:pubmedcentral.nih.gov:6765301 2023-05-15T17:12:02+02:00 Unbiased atomistic insight in the competing nucleation mechanisms of methane hydrates Arjun, Berendsen, Thom A. Bolhuis, Peter G. 2019-09-24 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6765301/ http://www.ncbi.nlm.nih.gov/pubmed/31501333 https://doi.org/10.1073/pnas.1906502116 en eng National Academy of Sciences http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6765301/ http://www.ncbi.nlm.nih.gov/pubmed/31501333 http://dx.doi.org/10.1073/pnas.1906502116 Copyright © 2019 the Author(s). Published by PNAS. https://creativecommons.org/licenses/by-nc-nd/4.0/ https://creativecommons.org/licenses/by-nc-nd/4.0/This open access article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) . CC-BY-NC-ND Physical Sciences Text 2019 ftpubmed https://doi.org/10.1073/pnas.1906502116 2019-10-06T00:41:26Z Methane hydrates have important industrial and climate implications, yet their formation via homogeneous nucleation under natural, moderate conditions is poorly understood. Obtaining such understanding could lead to improved control of crystallization, as well as insight into polymorph selection in general, but is hampered by limited experimental resolution. Direct molecular dynamics simulations using atomistic force fields could provide such insight, but are not feasible for moderate undercooling, due to the rare event nature of nucleation. Instead, we harvest ensembles of the rare unbiased nucleation trajectories by employing transition path sampling. We find that with decreasing undercooling the mechanism shifts from amorphous to crystalline polymorph formation. At intermediate temperature the 2 mechanisms compete. Reaction coordinate analysis reveals the amount of a specific methane cage type is crucial for crystallization, while irrelevant for amorphous solids. Polymorph selection is thus governed by kinetic accessibility of the correct cage type and, moreover, occurs at precritical nucleus sizes, apparently against Ostwald’s step rule. We argue that these results are still in line with classical nucleation theory. Our findings illuminate how selection between competing methane hydrate polymorphs occurs and might generalize to other hydrates and molecular crystal formation. Text Methane hydrate PubMed Central (PMC) Proceedings of the National Academy of Sciences 116 39 19305 19310
institution Open Polar
collection PubMed Central (PMC)
op_collection_id ftpubmed
language English
topic Physical Sciences
spellingShingle Physical Sciences
Arjun,
Berendsen, Thom A.
Bolhuis, Peter G.
Unbiased atomistic insight in the competing nucleation mechanisms of methane hydrates
topic_facet Physical Sciences
description Methane hydrates have important industrial and climate implications, yet their formation via homogeneous nucleation under natural, moderate conditions is poorly understood. Obtaining such understanding could lead to improved control of crystallization, as well as insight into polymorph selection in general, but is hampered by limited experimental resolution. Direct molecular dynamics simulations using atomistic force fields could provide such insight, but are not feasible for moderate undercooling, due to the rare event nature of nucleation. Instead, we harvest ensembles of the rare unbiased nucleation trajectories by employing transition path sampling. We find that with decreasing undercooling the mechanism shifts from amorphous to crystalline polymorph formation. At intermediate temperature the 2 mechanisms compete. Reaction coordinate analysis reveals the amount of a specific methane cage type is crucial for crystallization, while irrelevant for amorphous solids. Polymorph selection is thus governed by kinetic accessibility of the correct cage type and, moreover, occurs at precritical nucleus sizes, apparently against Ostwald’s step rule. We argue that these results are still in line with classical nucleation theory. Our findings illuminate how selection between competing methane hydrate polymorphs occurs and might generalize to other hydrates and molecular crystal formation.
format Text
author Arjun,
Berendsen, Thom A.
Bolhuis, Peter G.
author_facet Arjun,
Berendsen, Thom A.
Bolhuis, Peter G.
author_sort Arjun,
title Unbiased atomistic insight in the competing nucleation mechanisms of methane hydrates
title_short Unbiased atomistic insight in the competing nucleation mechanisms of methane hydrates
title_full Unbiased atomistic insight in the competing nucleation mechanisms of methane hydrates
title_fullStr Unbiased atomistic insight in the competing nucleation mechanisms of methane hydrates
title_full_unstemmed Unbiased atomistic insight in the competing nucleation mechanisms of methane hydrates
title_sort unbiased atomistic insight in the competing nucleation mechanisms of methane hydrates
publisher National Academy of Sciences
publishDate 2019
url http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6765301/
http://www.ncbi.nlm.nih.gov/pubmed/31501333
https://doi.org/10.1073/pnas.1906502116
genre Methane hydrate
genre_facet Methane hydrate
op_relation http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6765301/
http://www.ncbi.nlm.nih.gov/pubmed/31501333
http://dx.doi.org/10.1073/pnas.1906502116
op_rights Copyright © 2019 the Author(s). Published by PNAS.
https://creativecommons.org/licenses/by-nc-nd/4.0/
https://creativecommons.org/licenses/by-nc-nd/4.0/This open access article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND) (https://creativecommons.org/licenses/by-nc-nd/4.0/) .
op_rightsnorm CC-BY-NC-ND
op_doi https://doi.org/10.1073/pnas.1906502116
container_title Proceedings of the National Academy of Sciences
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container_issue 39
container_start_page 19305
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